BAC Information

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BAC

Clone NameB6Ng01-260L22
Chromosome10 (Build37)
Map Location 72,522,839 - 72,659,161
singlet/doubletdoublet
Overlap geneLOC432471
Upstream geneLOC100040505, Zwint
Downstream geneLOC544705, LOC100039981, LOC623191, Pcdh15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260L22.bB6Ng01-260L22.g
ACCGA065591GA065592
length3671,060
definitionB6Ng01-260L22.b B6Ng01-260L22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,522,839 - 72,523,205)(72,658,367 - 72,659,161)
sequence
gaaaaaaatgaaaagttcatctcggagaataaaatttgaagtttcagaaa
gatcaaaagagctatgccagtgcctggcaaatacagaagtggatgctcac
agtcatctattggaaggaacacagggtccccaatggaaaagctagagaaa
gtacccaaggagctgaaggggtctgcaaccctataggtggcacaacaata
tgaactaaccagtacccccagagcttgtgtctctagctgcatatgtagca
gaagatggcctagttggccttcattgggaagagaggccccttggtcttgc
caactttatataccccaatacagggaacaccagggccaagaagtgggagt
gggtgggtaggggagca
gaattcttgccatctgagtcaatcctgcttcttacaatagatttttcggt
agaagcattggaatttaagcagatgtggcaaagaacagtcctgtctagta
taacgcatgtcctatggaatgtggagggaatccaaagagttttagataga
tttttaattcctttccatcgccctgatatttaaatgtgatctaacaagct
cttctctacttattgaccccaaaaggacacaaacatgcacctccatctcc
atgactatgcctagcaacactatttacaagcaacagtggatataatagtc
cctgtgtccataaatttctggttgcattagaatgggaagatgtattatga
ctcagccttaataatgaaattactcaattactgatgtgtgcaacagcatg
cttgaataaaatgtatgataataagagggagaagctagtcaaaacaaaac
aaaaacaaacaaacaaaaagcctctgctccgaggctcagcgagctatgaa
gaacaggaggaacaatgattttaagagccagagggaatgggtattattaa
ggaaccagtgttttccagattcaacaggtatgacacagatataactcaaa
gagactggggtagcatagacaggttcaaacctgatgagttcctagtgctg
agaaagggaaatagacatgggatttcatcccaaacccagaagcattttgc
aactgatagccactaggaaaaagaaaaattcaaatgtctttaatgatcca
gcattgggtatatcagaacagaactaccctctatgattttgtgtatatgt
ctgtgtgtttttccttcaaatttcttggatttttgtttgtttgttttgtt
atttgtgaatatactgtgagtgtcttcaaacacaccagaaggagggcatc
agatcccattacagatgggtttgtgagccaccctgtggttgctgggaatt
gaactcaggatctctggagagcagtgagtgcttcttaacactgagccatt
ctcttcagccccaattgtgtcttgtttttatagcaaggaaaagaatatga
gtttgttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_72522839_72523205
seq2: B6Ng01-260L22.b_58_424

seq1  GAAAAAAATGAAAAGTTCATCTCGGAGAATAAAATTTGAAGTTTCAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATGAAAAGTTCATCTCGGAGAATAAAATTTGAAGTTTCAGAAA  50

seq1  GATCAAAAGAGCTATGCCAGTGCCTGGCAAATACAGAAGTGGATGCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAAAGAGCTATGCCAGTGCCTGGCAAATACAGAAGTGGATGCTCAC  100

seq1  AGTCATCTATTGGAAGGAACACAGGGTCCCCAATGGAAAAGCTAGAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCTATTGGAAGGAACACAGGGTCCCCAATGGAAAAGCTAGAGAAA  150

seq1  GTACCCAAGGAGCTGAAGGGGTCTGCAACCCTATAGGTGGCACAACAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCAAGGAGCTGAAGGGGTCTGCAACCCTATAGGTGGCACAACAATA  200

seq1  TGAACTAACCAGTACCCCCAGAGCTTGTGTCTCTAGCTGCATATGTAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTAACCAGTACCCCCAGAGCTTGTGTCTCTAGCTGCATATGTAGCA  250

seq1  GAAGATGGCCTAGTTGGCCTTCATTGGGAAGAGAGGCCCCTTGGTCTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGGCCTAGTTGGCCTTCATTGGGAAGAGAGGCCCCTTGGTCTTGC  300

seq1  CAACTTTATATACCCCAATACAGGGAACACCAGGGCCAAGAAGTGGGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTATATACCCCAATACAGGGAACACCAGGGCCAAGAAGTGGGAGT  350

seq1  GGGTGGGTAGGGGAGCA  367
      |||||||||||||||||
seq2  GGGTGGGTAGGGGAGCA  367

seq1: chr10_72658367_72659161
seq2: B6Ng01-260L22.g_328_1122 (reverse)

seq1  CCCAACAAACTTCATATTCTTTCTCCTGCTTATAAAAACAAGACACAATG  50
      |||||||||| ||||||||||| ||||   ||||||||||||||||||| 
seq2  CCCAACAAAC-TCATATTCTTT-TCCTTGCTATAAAAACAAGACACAATT  48

seq1  GGGGCTGGAGAG-ATGGCTCAGTGGTTAAG-AGCACTCACTGCTCTTCCA  98
      ||||||| |||| |||||||||| |||||| |||||||||||||| ||||
seq2  GGGGCTGAAGAGAATGGCTCAGT-GTTAAGAAGCACTCACTGCTC-TCCA  96

seq1  GAGATCCTGAGTTCAATTCCCAGCAACCACAGGGTGGCTCACAAA-CCAT  147
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAGATCCTGAGTTCAATTCCCAGCAACCACAGGGTGGCTCACAAACCCAT  146

seq1  CTGTAATGGGATCTGATGCCCT-CTTCTGGTGTGTTTGAAGACACTCACA  196
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTGTAATGGGATCTGATGCCCTCCTTCTGGTGTGTTTGAAGACACTCACA  196

seq1  GTATATTCACAAATAACAAAACAAACAAACAAAAATCCAAGAAATTTGAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTCACAAATAACAAAACAAACAAACAAAAATCCAAGAAATTTGAA  246

seq1  GGAAAAACACACAGACATATACACAAAATCATAGAGGGTAGTTCTGTTCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAACACACAGACATATACACAAAATCATAGAGGGTAGTTCTGTTCT  296

seq1  GATATACCCAATGCTGGATCATTAAAGACATTTGAATTTTTCTTTTTCCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACCCAATGCTGGATCATTAAAGACATTTGAATTTTTCTTTTTCCT  346

seq1  AGTGGCTATCAGTTGCAAAATGCTTCTGGGTTTGGGATGAAATCCCATGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTATCAGTTGCAAAATGCTTCTGGGTTTGGGATGAAATCCCATGT  396

seq1  CTATTTCCCTTTCTCAGCACTAGGAACTCATCAGGTTTGAACCTGTCTAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCCCTTTCTCAGCACTAGGAACTCATCAGGTTTGAACCTGTCTAT  446

seq1  GCTACCCCAGTCTCTTTGAGTTATATCTGTGTCATACCTGTTGAATCTGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCCCAGTCTCTTTGAGTTATATCTGTGTCATACCTGTTGAATCTGG  496

seq1  AAAACACTGGTTCCTTAATAATACCCATTCCCTCTGGCTCTTAAAATCAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTGGTTCCTTAATAATACCCATTCCCTCTGGCTCTTAAAATCAT  546

seq1  TGTTCCTCCTGTTCTTCATAGCTCGCTGAGCCTCGGAGCAGAGGCTTTTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTCCTGTTCTTCATAGCTCGCTGAGCCTCGGAGCAGAGGCTTTTT  596

seq1  GTTTGTTTGTTTTTGTTTTGTTTTGACTAGCTTCTCCCTCTTATTATCAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTTTGTTTTGTTTTGACTAGCTTCTCCCTCTTATTATCAT  646

seq1  ACATTTTATTCAAGCATGCTGTTGCACACATCAGTAATTGAGTAATTTCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTATTCAAGCATGCTGTTGCACACATCAGTAATTGAGTAATTTCA  696

seq1  TTATTAAGGCTGAGTCATAATACATCTTCCCATTTTAATGCAACCAGAAA  746
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTATTAAGGCTGAGTCATAATACATCTTCCCATTCTAATGCAACCAGAAA  746

seq1  TTTATGGACACAGGGACTATTATATCCACTGTTGCTTGTAAATAGTGTT  795
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGACACAGGGACTATTATATCCACTGTTGCTTGTAAATAGTGTT  795