BAC Information

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BAC

Clone NameB6Ng01-261H13
Chromosome10 (Build37)
Map Location 68,793,378 - 68,937,950
singlet/doubletdoublet
Overlap geneCdc2a, LOC100039696, EG382371
Upstream gene1700040L02Rik, EG665342, Tmem26, A930033H14Rik, Rhobtb1, LOC100040182
Downstream geneAnk3, LOC100039734, 5730416O20Rik, Ccdc6, 2310015B20Rik, Slc16a9, LOC632955, 1200015N20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261H13.bB6Ng01-261H13.g
ACCGA066133GA066134
length40679
definitionB6Ng01-261H13.b B6Ng01-261H13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,793,378 - 68,793,789)(68,937,872 - 68,937,950)
sequence
aatgtttcatcttaaaattcttgatcaaacatctcttttttttttttaag
attaatttattattatatctaagtacactgtagctgtcttcagacacacc
agaagagtgcatgagatctcattacagatggttgtgagccaccatgtggt
tgctgggatttgaactcagaaccttcggaagagcagtcggtgctcttaac
cactgagccacctctccagcccgatcaaacatctcttaagctacaatttt
tttttaaaaagatgtctggaggccagagggatggctcattagttaaaagt
gcttgctgctcgtacacaggaccggaattccgttcattgcacattcgggg
ctccccaccatcaccaaaactgccctacataacggtggtgcatggggggg
gggggg
aacgttccacgggtccatcaccagagccaagtgagacactagaaaaccat
ccccgcgtatgtggggggtggggtggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_68793378_68793789
seq2: B6Ng01-261H13.b_48_459

seq1  GAATTCAATGTTTCATCTTAAAATTCTTGATCAAACATCTCTTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGTTTCATCTTAAAATTCTTGATCAAACATCTCTTTTTTTTT  50

seq1  TTTAAGATTAATTTATTATTATATCTAAGTACACTGTAGCTGTCTTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGATTAATTTATTATTATATCTAAGTACACTGTAGCTGTCTTCAGA  100

seq1  CACACCAGAAGAGTGCATGAGATCTCATTACAGATGGTTGTGAGCCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCAGAAGAGTGCATGAGATCTCATTACAGATGGTTGTGAGCCACCA  150

seq1  TGTGGTTGCTGGGATTTGAACTCAGAACCTTCGGAAGAGCAGTCGGTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTGCTGGGATTTGAACTCAGAACCTTCGGAAGAGCAGTCGGTGCT  200

seq1  CTTAACCACTGAGCCACCTCTCCAGCCCGATCAAACATCTCTTAAGCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACCACTGAGCCACCTCTCCAGCCCGATCAAACATCTCTTAAGCTAC  250

seq1  AATTTTTTTTTAAAAAGATGTCTGGAGGCCAGAGGGATGGCTCATTAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTTTAAAAAGATGTCTGGAGGCCAGAGGGATGGCTCATTAGTT  300

seq1  AAAAGTGCTTGCTGCTCGTACACAGGACCGGAATTCCGTTCATTGCACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGCTTGCTGCTCGTACACAGGACCGGAATTCCGTTCATTGCACAT  350

seq1  TCGGGGCTCCCCACCATCACCAAAACTGCCCTACATAACGGTGGTGCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGCTCCCCACCATCACCAAAACTGCCCTACATAACGGTGGTGCATG  400

seq1  GGGGGGGGGGGG  412
      ||||||||||||
seq2  GGGGGGGGGGGG  412

seq1: chr10_68937872_68937950
seq2: B6Ng01-261H13.g_72_150 (reverse)

seq1  CCTCCACCCCACCCCCCACATACGCGGGGATGGTTTTCTAGTGTCTCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACCCCACCCCCCACATACGCGGGGATGGTTTTCTAGTGTCTCACT  50

seq1  TGGCTCTGGTGATGGACCCGTGGAACGTT  79
      |||||||||||||||||||||||||||||
seq2  TGGCTCTGGTGATGGACCCGTGGAACGTT  79