BAC Information

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BAC

Clone NameB6Ng01-264G23
Chromosome10 (Build37)
Map Location 77,879,387 - 77,880,362
singlet/doubletsinglet
Overlap genenone
Upstream geneAdarb1, 1810008A18Rik, Itgb2, Pttg1ip, Sumo3, Ube2g2, LOC674243, LOC670895, Krtap12-1, A030009A09Rik, LOC100041250, LOC100041261, LOC634517, LOC100041281, LOC634504, LOC675294, LOC670880, LOC100040299, LOC675238, C330046G03Rik, EG544710, LOC100041351, 1700009J07Rik, Lrrc3, Trpm2, 1810043G02Rik, Pfkl, Aire, Dnmt3l, Icosl, D10Jhu81e, Pwp2, Tmem1, Agpat3, LOC100041500, Rrp1
Downstream geneCstb, Pdxk, EG665862, Olfr1358, LOC546482, Ilvbl, Syde1, Olfr1357, LOC665890, Casp14, Ccdc105, Slc1a6, Olfr1356, GA_x5J8B7W4DUT-12263-11330, GA_x5J8B7TPDN2-1058-1265, Olfr233-ps1, Olfr8, GA_x5J8B7TNKDU-1250-1574, Olfr1353, Olfr1352, Olfr1351, Olfr57, 2610008E11Rik, EG624765, AJ543404, LOC100041709, EG624845
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264G23.bB6Ng01-264G23.g
ACCGA068342GA068343
length891990
definitionB6Ng01-264G23.b B6Ng01-264G23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtactcttttttttttttttttttttttttt
ttttggttttggtttttcaagacaggatttctctgtatagccctggctgt
cctgaactcactttgtagaccaggctggcctcgaactcaaaaatccgcct
gcctctgccttctgcactcctatgtcatgaacatctaactgtaggatgag
atagggctgcccaacgcatatggcccattctgagataagacttttcccaa
tttttgtagttatctccaggcagttctttgggaggagagtttatgatctc
gttctagatttcatggtctattcctgagccctggtatttaaatggagaca
aatggggtccttaaatggaaacaaatgggggactttaaatcgagaatatg
gggtttatgttgccctttcaatataaataactcaagacataaaacatcag
gaagccaaataacccaattaaaatgacacacagagctaaacagagaattc
ttaacagaggaaacacaaatggccaagaagcacttaaaagaaatactcag
catccttagtcatcagggaaatgcaaatcaaaatgactctgagattccac
cttacaatcagaatggctgagatcaaaaactcaagcaacatcacatgctg
gtgaggatgtgaagaaaggggaacactcctccattgatagtgggattgca
aacttgtacaaccactctggaaatcaatctgacagtttcccagaaaactg
aaactagttctatcagaagactcatctatatcattcctaggcaaatactc
aaaagatgctccaccataccatgaggacacatgctccattagtttcatag
cagccttactggttatagccagaagctggaaacaacccaga
gaattcctggtcagcagggtctgccctgtgagttccgagccaatcagagt
tctgtagtaagaccttgtcccaaacaaacaaacaaacaaacaaacaaact
ccatcttttgaagaaatcacaaatataggtcagggggtgaaggtcgcaag
atttctggtaacaaattttttgaatgaaattttttaagatgggtgaggtg
agtaggaggcactccaaaggtatgtgtgatatatatatatacatatatat
atatatatatatatatatatatatatatatatacacacacacaaatggta
tatataaggtgtatttatatataggatatttacacacacacatacataca
tacatacatacatatatggaaggttgagggagggcataagagagaaagag
acattggtggattcacttagtttagatgtcctgatagttaactttgtcaa
acagttttggagctccaagaacaccaagtcacacacagaggtaggtgaca
cacactggctgctacacagactaaaacatcccaagacggtttctggcttt
ggacctggagcgatctaactcccagtcactggtgtcacctgttggactta
ggacacatagatgatgcttcctgctgcgtggggctgtagctgacaattct
gcagccacaagtcacatgtctgtatgtggcaatgaggccaggctctcgtc
cctaggcctgaggaagacaaggttgaatgtcagcatcccaggtcttcagg
agagacagaatttgtctgaaagacgctatgaagcatttaatccctggatc
ctgacacccatcggcccagaggctccccctctccctcccttatctgtggg
aaacatttcctctatttggttttgttatgtaaatgaaaaaagttgggaaa
agttgaggctctgtctggcttgccttcctcctttccttcagaaatcggcc
acaaacttcgggcaacaaccactcttttacttttctatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_77879387_77880362
seq2: B6Ng01-264G23.g_66_1055

seq1  GAATTCCTGGTCAGCAGGGTCTGCCCTGTGAGTTCCGAGCCAATCAGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGTCAGCAGGGTCTGCCCTGTGAGTTCCGAGCCAATCAGAGT  50

seq1  TCTGTAGTAAGACCTTGTCCCAAACAAACAAACAAACAAACAAACAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGTAAGACCTTGTCCCAAACAAACAAACAAACAAACAAACAAACT  100

seq1  CCATCTTTTGAAGAAATCACAAATATAGGTCAGGGGGTGAAGGTCGCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTTTGAAGAAATCACAAATATAGGTCAGGGGGTGAAGGTCGCAAG  150

seq1  ATTTCTGGTAACAAATTTTTTGAATGAAATTTTTTAAGATGGGTGAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGGTAACAAATTTTTTGAATGAAATTTTTTAAGATGGGTGAGGTG  200

seq1  AGTAGGAGGCACTCCAAAGGTATGTGTGATATATATATATACATATATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGAGGCACTCCAAAGGTATGTGTGATATATATATATACATATATAT  250

seq1  ATATATATATATATATATATATATATATATATACACACACACAAATGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATACACACACACAAATGGTA  300

seq1  TATATAAGGTGTATTTATATATAGGATATTTACACACACACATACATACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAGGTGTATTTATATATAGGATATTTACACACACACATACATACA  350

seq1  TACATACATACATATATGGAAGGTTGAGGGAGGGCATAAGAGAGAAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACATACATATATGGAAGGTTGAGGGAGGGCATAAGAGAGAAAGAG  400

seq1  ACATTGGTGGATTCACTTAGTTTAGATGTCCTGATAGTTAACTTTGTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGTGGATTCACTTAGTTTAGATGTCCTGATAGTTAACTTTGTCAA  450

seq1  ACAGTTTTGGAGCTCCAAGAACACCAAGTCACACACAGAGGTAGGTGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTTGGAGCTCCAAGAACACCAAGTCACACACAGAGGTAGGTGACA  500

seq1  CACACTGGCTGCTACACAGACTAAAACATCCCAAGACGGTTTCTGGCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGGCTGCTACACAGACTAAAACATCCCAAGACGGTTTCTGGCTTT  550

seq1  GGACCTGGAGCGATCTAACTCCCAGTCACTGGTGTCACCTGTTGGACTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGGAGCGATCTAACTCCCAGTCACTGGTGTCACCTGTTGGACTTA  600

seq1  GGACACATAGATGATGCTTCCTGCTGCGTGGGGCTGTAGCTGACAATTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACATAGATGATGCTTCCTGCTGCGTGGGGCTGTAGCTGACAATTCT  650

seq1  GCAGCCACAAGTCACATGTCTGTATGTGGCAATGAGGCCAGGCTCTCGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCACAAGTCACATGTCTGTATGTGGCAATGAGGCCAGGCTCTCGTC  700

seq1  CCTAGGCCTGAGGAAGACAAGGTTGAATGTCAGCATCCCAGGTCTTCAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGCCTGAGGAAGACAAGGTTGAATGTCAGCATCCCAGGTCTTCAGG  750

seq1  AGAGACAGAA-TTGTCTGAAAGACGCTATGAAGCATTTAATCCCTGGATC  799
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGAATTTGTCTGAAAGACGCTATGAAGCATTTAATCCCTGGATC  800

seq1  CTGACACCCATCGGCCCAGAGGCTCCCCCTCTCCCTCCCTTATCTGT-GG  848
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTGACACCCATCGGCCCAGAGGCTCCCCCTCTCCCTCCCTTATCTGTGGG  850

seq1  AAACA-TTCCTCTATTTGG-TTTGTTATGTAAATG-AAAAAGTTGGG-AA  894
      ||||| ||||||||||||| ||||||||||||||| ||||||||||| ||
seq2  AAACATTTCCTCTATTTGGTTTTGTTATGTAAATGAAAAAAGTTGGGAAA  900

seq1  AGTTGAGGCTCTGTCTGGC-TGCC-TCCTCC-TTCCCTCAGAAATCAGGC  941
      ||||||||||||||||||| |||| |||||| |||| ||||||||| |||
seq2  AGTTGAGGCTCTGTCTGGCTTGCCTTCCTCCTTTCCTTCAGAAATC-GGC  949

seq1  CACAA--CTCGGGCA--CACCACTC-TTTAC-TTTCTATGG  976
      |||||   |||||||   ||||||| ||||| |||||||||
seq2  CACAAACTTCGGGCAACAACCACTCTTTTACTTTTCTATGG  990