BAC Information

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BAC

Clone NameB6Ng01-264P10
Chromosome10 (Build37)
Map Location 95,100,326 - 95,198,401
singlet/doubletdoublet
Overlap geneEG628119
Upstream geneEG667315, 4921537D05Rik, Plxnc1, Cradd, Socs2, LOC100042004, D10Ertd322e, Ube2n, Nudt4
Downstream geneEea1, EG432491, LOC667380, Btg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264P10.bB6Ng01-264P10.g
ACCGA068736GA068737
length1,204935
definitionB6Ng01-264P10.b B6Ng01-264P10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,197,183 - 95,198,401)(95,100,326 - 95,101,229)
sequence
gaattcagagttattgctaggattatgtgtattaacaaacacaaagcgct
acaacaatgcatgcctagggcccaataaaaccttgatagcaatatacggt
cctcagtagtgggatccttttaaaacatgcaattggcagttggattccgt
cccttgatctggaacttttcatactgatttgcagacacttttcaacattc
tacctcatattcattcactggtgctcatgtgttgcaaacaccttctttta
atcattgccttgccttttcagtttttatggtgtctttgtcatgagggttt
tacccagaatccaatcagataagccatctcttgtcctttctctttactct
taattacagtagctttagtgttacttttgtttggattgctctgttgttgt
aatcactgaggcatggattttctctggttctaagttcaagccgcctagga
gaagaacctttaatagaactttgggatatgaaaatgaagggaacctgttt
tcctgttaaggtcttcacaacgggatggtattctagcccatgctctgttg
ctaacaaaatactcaaaactgagtcatttattatatagaggttaatgttg
gtccctagttctacaagtcatggcaccagcaagggccttctgttggctca
gtcatggaggaaaccagacagcaagagcaggtacacggaagacagaaaca
tgaagcttcccctcatttatgacaactcccacatgactcatccagtactt
agagggaaaaagtaggtgttttagtctgggttttattgctatgaagagac
accatgatcaaagtaagttttataaaagaaaacactttacgtggggctgg
cttacagtttcagagttatagtccattatcatcatggagggaaatattgc
agtgcacaggcagacatggttgctggagaaggagctgagagttctacatc
ttgatctgaaggcaaccagaagagaaattatctttctacaagcacccagg
aggagctcttctataacactggtagaacctgagcatagagggcctcaaag
ccacctaccacagttacatatttcgttcaacagccacacctccctcaata
ggcttacactctatagtgctactcccttgccatgcagtcaaacacatgat
ctgtggggtcactcttacttaccaggtaggtgaaagatgaatccccttct
taac
gaattcaagattagctttgactgctgtcttacagtttctattgctgtgaa
gagataccatgatcatggcatctcttggaaaggaaaacatttcattgggg
ctggtttagagtttcagaggttcagtccattgtcatcatggtaggaagca
tggcagcatgcaggcagacctggtgctagagaaagggctgagagttctat
atccagataggcaggcagcaagggagtcactaggcctggcttgagcatct
gaaacttcaaagcccacacccacaatgacagtggatttcttccatcaagg
tcacacctactacaactagaccatacctcttaatagtgccattccctatg
agcctacaggggccatttttatttaaaccacagcaatgacatagggaatt
ttaggccaacctgggctacctgtagttgcatctcaacaaatgaaaagcaa
taataacaaaaacaaacaaaataaatataagcagcagcaaaataacaaac
aaaaacaaaagaaaaaaagtaaacataattctattggtaggatttgaata
tttttactagtttctttattagggtttaagaaaataaatatctacaaaca
gttcaagcaggaaatatttgagaagcactgagggagggtcagaagtgctg
acagagtctcttcttgtgcccagattgtgtctaaggtgggtctcagccag
cattcagatgttctaggcccacgttaggggctggttacctgaaggtgtct
cacttgcgtttataacttgtttgagttataagagtctgttcctatggcta
ggaaatgagtaggctggtggctgtctcaggcagggtccccttgcccagcc
tgggaactccaggaatagaagggctgctttctatgtgaggagacataggt
atgtgtggtgtgtttgaggctgaggggaaggtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_95197183_95198401
seq2: B6Ng01-264P10.b_49_1252 (reverse)

seq1  GTTAAGA--GGGATTCATCTTTCTCACTTACTGTGTTGAGTTAAAGAGGT  48
      |||||||  ||||||||||||  |||| |||  || | |||  |||||  
seq2  GTTAAGAAGGGGATTCATCTT--TCACCTAC-CTGGTAAGT--AAGAG--  43

seq1  TTGACCCCCCACAGATTCATGTGTTTGACTGCATGGCCACAGGGAGTAGC  98
       |||  ||||||||| |||||||||||||||||||||   ||||||||||
seq2  -TGA--CCCCACAGA-TCATGTGTTTGACTGCATGGC--AAGGGAGTAGC  87

seq1  ACTATTAGGAAGTGTAGCCTTATTGGAGGAGGTGTGGCCTTGTTGGACGA  148
      |||| |||  ||||||  | |||||  |||||||||||  ||||| ||||
seq2  ACTA-TAG--AGTGTAAGCCTATTGAGGGAGGTGTGGC--TGTTGAACGA  132

seq1  AATATGTAACTGT-GTAGGTGGGCTTTGAGGCCCTCTATGCTCAGGTTCT  197
      ||||||||||||| |||||| |||||||||||||||||||||||||||||
seq2  AATATGTAACTGTGGTAGGT-GGCTTTGAGGCCCTCTATGCTCAGGTTCT  181

seq1  ACCCAGTGTTATAG-AGAGCCTCCTCCTGGGTGCTTGTAG-AAGATATTT  245
      | |||||||||||| |||| |||||||||||||||||||| |||||| ||
seq2  A-CCAGTGTTATAGAAGAG-CTCCTCCTGGGTGCTTGTAGAAAGATAATT  229

seq1  TCTCTTTCTGGTTGCCTTCAGATCAAGATGTAGAACTCTCAGCTCCTTCT  295
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTC-TTCTGGTTGCCTTCAGATCAAGATGTAGAACTCTCAGCTCCTTCT  278

seq1  CCAGC-ACCATGTCTGCCTGTGCACTGCAATATTTCCCTCCATGATGATA  344
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAACCATGTCTGCCTGTGCACTGCAATATTTCCCTCCATGATGATA  328

seq1  ATGGACTATAACTCTGAAACTGTAAGCCAGCCCCACGT-AAGTGTTTTCT  393
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATGGACTATAACTCTGAAACTGTAAGCCAGCCCCACGTAAAGTGTTTTCT  378

seq1  TTTATAAAACTTACTTTGATCATGGTGTCTCTTCATAGCAATAAAACCCA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAACTTACTTTGATCATGGTGTCTCTTCATAGCAATAAAACCCA  428

seq1  GACTAAAACACCTACTTTTTCCCTCTAAGTACTGGATGAGTCATGTGGGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAAACACCTACTTTTTCCCTCTAAGTACTGGATGAGTCATGTGGGA  478

seq1  GTTGTCATAAATGAGGGGAAGCTTCATGTTTCTGTCTTCCGTGTACCTGC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCATAAATGAGGGGAAGCTTCATGTTTCTGTCTTCCGTGTACCTGC  528

seq1  TCTTGCTGTCTGGTTTCCTCCATGACTGAGCCAACAGAAGGCCCTTGCTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTGTCTGGTTTCCTCCATGACTGAGCCAACAGAAGGCCCTTGCTG  578

seq1  GTGCCATGACTTGTAGAACTAGGGACCAACATTAACCTCTATATAATAAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCATGACTTGTAGAACTAGGGACCAACATTAACCTCTATATAATAAA  628

seq1  TGACTCAGTTTTGAGTATTTTGTTAGCAACAGAGCATGGGCTAGAATACC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCAGTTTTGAGTATTTTGTTAGCAACAGAGCATGGGCTAGAATACC  678

seq1  ATCCCGTTGTGAAGACCTTAACAGGAAAACAGGTTCCCTTCATTTTCATA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCGTTGTGAAGACCTTAACAGGAAAACAGGTTCCCTTCATTTTCATA  728

seq1  TCCCAAAGTTCTATTAAAGGTTCTTCTCCTAGGCGGCTTGAACTTAGAAC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAGTTCTATTAAAGGTTCTTCTCCTAGGCGGCTTGAACTTAGAAC  778

seq1  CAGAGAAAATCCATGCCTCAGTGATTACAACAACAGAGCAATCCAAACAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAAATCCATGCCTCAGTGATTACAACAACAGAGCAATCCAAACAA  828

seq1  AAGTAACACTAAAGCTACTGTAATTAAGAGTAAAGAGAAAGGACAAGAGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACACTAAAGCTACTGTAATTAAGAGTAAAGAGAAAGGACAAGAGA  878

seq1  TGGCTTATCTGATTGGATTCTGGGTAAAACCCTCATGACAAAGACACCAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTATCTGATTGGATTCTGGGTAAAACCCTCATGACAAAGACACCAT  928

seq1  AAAAACTGAAAAGGCAAGGCAATGATTAAAAGAAGGTGTTTGCAACACAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTGAAAAGGCAAGGCAATGATTAAAAGAAGGTGTTTGCAACACAT  978

seq1  GAGCACCAGTGAATGAATATGAGGTAGAATGTTGAAAAGTGTCTGCAAAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACCAGTGAATGAATATGAGGTAGAATGTTGAAAAGTGTCTGCAAAT  1028

seq1  CAGTATGAAAAGTTCCAGATCAAGGGACGGAATCCAACTGCCAATTGCAT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATGAAAAGTTCCAGATCAAGGGACGGAATCCAACTGCCAATTGCAT  1078

seq1  GTTTTAAAAGGATCCCACTACTGAGGACCGTATATTGCTATCAAGGTTTT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAAAGGATCCCACTACTGAGGACCGTATATTGCTATCAAGGTTTT  1128

seq1  ATTGGGCCCTAGGCATGCATTGTTGTAGCGCTTTGTGTTTGTTAATACAC  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGCCCTAGGCATGCATTGTTGTAGCGCTTTGTGTTTGTTAATACAC  1178

seq1  ATAATCCTAGCAATAACTCTGAATTC  1219
      ||||||||||||||||||||||||||
seq2  ATAATCCTAGCAATAACTCTGAATTC  1204

seq1: chr10_95100326_95101229
seq2: B6Ng01-264P10.g_97_1001

seq1  ACAGTTTCTATTGCTGTGAAGAGATACCATGATCATGGCATCTCTTGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTCTATTGCTGTGAAGAGATACCATGATCATGGCATCTCTTGGAA  50

seq1  AGGAAAACATTTCATTGGGGCTGGTTTAGAGTTTCAGAGGTTCAGTCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAACATTTCATTGGGGCTGGTTTAGAGTTTCAGAGGTTCAGTCCAT  100

seq1  TGTCATCATGGTAGGAAGCATGGCAGCATGCAGGCAGACCTGGTGCTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCATGGTAGGAAGCATGGCAGCATGCAGGCAGACCTGGTGCTAGA  150

seq1  GAAAGGGCTGAGAGTTCTATATCCAGATAGGCAGGCAGCAAGGGAGTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGCTGAGAGTTCTATATCCAGATAGGCAGGCAGCAAGGGAGTCAC  200

seq1  TAGGCCTGGCTTGAGCATCTGAAACTTCAAAGCCCACACCCACAATGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCTGGCTTGAGCATCTGAAACTTCAAAGCCCACACCCACAATGACA  250

seq1  GTGGATTTCTTCCATCAAGGTCACACCTACTACAACTAGACCATACCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATTTCTTCCATCAAGGTCACACCTACTACAACTAGACCATACCTCT  300

seq1  TAATAGTGCCATTCCCTATGAGCCTACAGGGGCCATTTTTATTTAAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTGCCATTCCCTATGAGCCTACAGGGGCCATTTTTATTTAAACCA  350

seq1  CAGCAATGACATAGGGAATTTTAGGCCAACCTGGGCTACCTGTAGTTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATGACATAGGGAATTTTAGGCCAACCTGGGCTACCTGTAGTTGCA  400

seq1  TCTCAACAAATGAAAAGCAATAATAACAAAAACAAACAAAATAAATATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACAAATGAAAAGCAATAATAACAAAAACAAACAAAATAAATATAA  450

seq1  GCAGCAGCAAAATAACAAACAAAAACAAAAGAAAAAAAGTAAACATAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGCAAAATAACAAACAAAAACAAAAGAAAAAAAGTAAACATAATT  500

seq1  CTATTGGTAGGATTTGAATATTTTTACTAGTTTCTTTATTAGGGTTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGTAGGATTTGAATATTTTTACTAGTTTCTTTATTAGGGTTTAAG  550

seq1  AAAATAAATATCTACAAACAGTTCAAGCAGGAAATATTTGAGAAGCACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATATCTACAAACAGTTCAAGCAGGAAATATTTGAGAAGCACTG  600

seq1  AGGGAGGGTCAGAAGTGCTGACAGAGTCTCTTCTTGTGCCCAGATTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGTCAGAAGTGCTGACAGAGTCTCTTCTTGTGCCCAGATTGTGT  650

seq1  CTAAGGTGGGTCTCAGCCAGCATTCAGATGTTCTAGGCCCACGTTAGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTGGGTCTCAGCCAGCATTCAGATGTTCTAGGCCCACGTTAGGGG  700

seq1  CTGGTTACCTGAAGGTGTCTCACTTGCGTTTATAACTTGTTTGAGTTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTACCTGAAGGTGTCTCACTTGCGTTTATAACTTGTTTGAGTTATA  750

seq1  AGAGTCTGTTCCTATGGCTAGGAAATGAGTAGGCTGGTGGCTGTCTCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTGTTCCTATGGCTAGGAAATGAGTAGGCTGGTGGCTGTCTCAGG  800

seq1  CAGGGTCCCCTTGCCCAGCCTGGGAACTCCAGGAATAGAAGGGGCTGC-T  849
      |||||||||||||||||||||||||||||||||||||||| ||||||| |
seq2  CAGGGTCCCCTTGCCCAGCCTGGGAACTCCAGGAATAGAA-GGGCTGCTT  849

seq1  TCTATGTGAGGAGACATAGGTATGTGTGGTGTGTTTGAGGCTGAGGGG-A  898
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCTATGTGAGGAGACATAGGTATGTGTGGTGTGTTTGAGGCTGAGGGGAA  899

seq1  GGTGGT  904
      ||||||
seq2  GGTGGT  905