BAC Information

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BAC

Clone NameB6Ng01-265L10
Chromosome10 (Build37)
Map Location 56,385,933 - 56,460,174
singlet/doubletdoublet
Overlap geneLOC668355
Upstream geneD630037F22Rik, 1700060H10Rik, EG629732, Gja1, EG668347, LOC100042622
Downstream geneLOC100042628, EG629739, LOC629742, LOC668363, Hsf2, Serinc1, LOC211619, LOC668374, Pkib
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265L10.bB6Ng01-265L10.g
ACCGA069292GA069293
length9161,093
definitionB6Ng01-265L10.b B6Ng01-265L10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,385,933 - 56,386,848)(56,459,075 - 56,460,174)
sequence
tgccagagccttagggatagtttgaaatacataaatcaatagctataatc
caccatataaatgtaccgaaagacctaaaccatgtaatggatacataaaa
ttgttttaagtgaaaaaaatacttcagagattcttcagcatgaaatcaaa
taacaataaacattgattcaaatctacacattcaaaaaagattgccagta
aagttaaatatgtaggtatctaggaaagaacatataagtgttcacttctt
cttattcgtttaaagataaattttaataatattcactaaaagcctgaagc
aatagatcacttaagagctcatgctgcttttgaagaggttctgagtttaa
tccccagtgcccatgtaaggtagctcacaaccatccacaaccatccacag
ccccaaggtgtctatcaccttctcctgatctcggaggttaattgtcaaaa
tgtatattatattattctatattatattatgtataatagcacagaaatta
tacacagagattaagcaatatattactaaataagcaattactcaatgaat
caatcataaaagaaattagaaaattactggaaattaataaaaacgcaaat
taacatgacaaagcaacaaaaataacatgaaaaaaaatcttatgggtata
gcttcagaaaatacctacattaaaaatgagaaatatctcaaatcatgatt
acatctttcactttaaaaagaagagactaaatcacattgagtgaaagata
attgtaaagattagattagaaataaatgaagaacagaaaagtataaagta
aaattaatgaagcctaatattaagatcaacatgacgaatactttcacaca
taaacaggaaaaagccctcaactaaaaaaagtgcgtgcgtgtgtgtgtgt
gtgtgtgtgtgtgtgt
gaattctattccctagattttatacttgtctatctttgaaatctgcaacg
ttgctgctcaaatatcagctgagtgagtttttctaataccttatcaaaaa
tattcctttccattttcttacatccttcgttttcctcataattatcacca
ctatttacattttttgttttaaattttaaatacatacatattttattaat
ctctgaaattttcacatgtagtatattttgattgtatttatcacctacta
cttcctccaacacctcctatattttctcttacaagaaacattaaatatta
atcattgttatcaaatattataaaatgtgcttaaaacaaggaactaaaat
atttttatctcccccactttgtaggacttttctgtaaatgtgtaactctt
tataagacctttgtttacacaaatgctttgctgaagtgttctcatactga
agtgattgagccttccctcttcatttcctttgtcgatccctttaaaacta
gccagtcttgacagactgagatcaggtctcagcctttggggaaaggacag
agtaaccacctgagacagaatgaaaaccaagcgcacatgcacattccatc
tcaggctgggctggggacttgctcctccgctctggtgaggagcccaccct
cctgcacaagagtaaagtcttgctttgttgcagttggcatgctctttctt
tatgaccctgaatttatttctaacatgccctctaaacattgtgtcctcct
ttttctaatttttataacccagagtccaatttgagctgccagttcacgtg
tgggatcatctatgttcagtcaacataccaggagccacatccttaacaat
agtgattcttctcctcgccaatagccaccaattgtaaagaactctaaggc
tatatatttaagtgtatatatttaagatgatattaaccaactacttataa
atagtatatttaaaccttgacttttaaacacccattgttatttttttttc
tttttaatatataatttttattctttaatctttttgaacatccagactca
tcccttccctgatctgacttgactgcttccaataattcttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_56385933_56386848
seq2: B6Ng01-265L10.b_57_972

seq1  TGCCAGAGCCTTAGGGATAGTTTGAAATACATAAATCAATAGCTATAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGAGCCTTAGGGATAGTTTGAAATACATAAATCAATAGCTATAATC  50

seq1  CACCATATAAATGTACCGAAAGACCTAAACCATGTAATGGATACATAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATATAAATGTACCGAAAGACCTAAACCATGTAATGGATACATAAAA  100

seq1  TTGTTTTAAGTGAAAAAAATACTTCAGAGATTCTTCAGCATGAAATCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTAAGTGAAAAAAATACTTCAGAGATTCTTCAGCATGAAATCAAA  150

seq1  TAACAATAAACATTGATTCAAATCTACACATTCAAAAAAGATTGCCAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATAAACATTGATTCAAATCTACACATTCAAAAAAGATTGCCAGTA  200

seq1  AAGTTAAATATGTAGGTATCTAGGAAAGAACATATAAGTGTTCACTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAATATGTAGGTATCTAGGAAAGAACATATAAGTGTTCACTTCTT  250

seq1  CTTATTCGTTTAAAGATAAATTTTAATAATATTCACTAAAAGCCTGAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCGTTTAAAGATAAATTTTAATAATATTCACTAAAAGCCTGAAGC  300

seq1  AATAGATCACTTAAGAGCTCATGCTGCTTTTGAAGAGGTTCTGAGTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATCACTTAAGAGCTCATGCTGCTTTTGAAGAGGTTCTGAGTTTAA  350

seq1  TCCCCAGTGCCCATGTAAGGTAGCTCACAACCATCCACAACCATCCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGTGCCCATGTAAGGTAGCTCACAACCATCCACAACCATCCACAG  400

seq1  CCCCAAGGTGTCTATCACCTTCTCCTGATCTCGGAGGTTAATTGTCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGGTGTCTATCACCTTCTCCTGATCTCGGAGGTTAATTGTCAAAA  450

seq1  TGTATATTATATTATTCTATATTATATTATGTATAATAGCACAGAAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTATATTATTCTATATTATATTATGTATAATAGCACAGAAATTA  500

seq1  TACACAGAGATTAAGCAATATATTACTAAATAAGCAATTACTCAATGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGAGATTAAGCAATATATTACTAAATAAGCAATTACTCAATGAAT  550

seq1  CAATCATAAAAGAAATTAGAAAATTACTGGAAATTAATAAAAACGCAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATAAAAGAAATTAGAAAATTACTGGAAATTAATAAAAACGCAAAT  600

seq1  TAACATGACAAAGCAACAAAAATAACATGAAAAAAAATCTTATGGGTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGACAAAGCAACAAAAATAACATGAAAAAAAATCTTATGGGTATA  650

seq1  GCTTCAGAAAATACCTACATTAAAAATGAGAAATATCTCAAATCATGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGAAAATACCTACATTAAAAATGAGAAATATCTCAAATCATGATT  700

seq1  ACATCTTTCACTTTAAAAAGAAGAGACTAAATCACATTGAGTGAAAGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTTCACTTTAAAAAGAAGAGACTAAATCACATTGAGTGAAAGATA  750

seq1  ATTGTAAAGATTAGATTAGAAATAAATGAAGAACAGAAAAGTATAAAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAAGATTAGATTAGAAATAAATGAAGAACAGAAAAGTATAAAGTA  800

seq1  AAATTAATGAAGCCTAATATTAAGATCAACATGACGAATACTTTCACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATGAAGCCTAATATTAAGATCAACATGACGAATACTTTCACACA  850

seq1  TAAACAGGAAAAAGCCCTCAACTAAAAAAAGTGCGTGCGTGTGTGTGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGGAAAAAGCCCTCAACTAAAAAAAGTGCGTGCGTGTGTGTGTGT  900

seq1  GTGTGTGTGTGTGTGT  916
      ||||||||||||||||
seq2  GTGTGTGTGTGTGTGT  916

seq1: chr10_56459075_56460174
seq2: B6Ng01-265L10.g_70_1162 (reverse)

seq1  AAAAAGAATTTATTTGGGAAGCAGTCAAGTTCAGACCAGGAAGGGGATGA  50
      |||||||| |||||  ||||||||||||| ||||| |||| | |||||| 
seq2  AAAAAGAA-TTATT--GGAAGCAGTCAAG-TCAGATCAGGGAAGGGATG-  45

seq1  AGTCTGGATTGTCAAAAAGGATTAAAGAATAAAATTAATATATTTAAAAA  100
      |||||||||  ||||||| ||||||||||||||| | ||||||| |||| 
seq2  AGTCTGGATGTTCAAAAA-GATTAAAGAATAAAAATTATATATTAAAAAG  94

seq1  GAAAAAAAATAACAATGGTTGTTTAAAAAGTCAA-GTTTAAATATACTAT  149
       ||||||||||||||||| ||||| ||||||||| |||||||||||||| 
seq2  AAAAAAAAATAACAATGGGTGTTT-AAAAGTCAAGGTTTAAATATACTA-  142

seq1  TTTATAAGTAGTTGGTTAATATCATCTTAAATATATACACTTAAATATAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAGTAGTTGGTTAATATCATCTTAAATATATACACTTAAATATAT  192

seq1  AGCCTTAGAGTTCTTTACAATTGGTGGCTATTGGCGAGGAGAAGAATCAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTAGAGTTCTTTACAATTGGTGGCTATTGGCGAGGAGAAGAATCAC  242

seq1  TATTGTTAAGGATGTGGCTCCTGGTATGTTGACTGAACATAGATGATCCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTAAGGATGTGGCTCCTGGTATGTTGACTGAACATAGATGATCCC  292

seq1  ACACGTGAACTGGCAGCTCAAATTGGACTCTGGGTTATAAAAATTAGAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGTGAACTGGCAGCTCAAATTGGACTCTGGGTTATAAAAATTAGAAA  342

seq1  AAGGAGGACACAATGTTTAGAGGGCATGTTAGAAATAAATTCAGGGTCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGACACAATGTTTAGAGGGCATGTTAGAAATAAATTCAGGGTCAT  392

seq1  AAAGAAAGAGCATGCCAACTGCAACAAAGCAAGACTTTACTCTTGTGCAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAGCATGCCAACTGCAACAAAGCAAGACTTTACTCTTGTGCAG  442

seq1  GAGGGTGGGCTCCTCACCAGAGCGGAGGAGCAAGTCCCCAGCCCAGCCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTGGGCTCCTCACCAGAGCGGAGGAGCAAGTCCCCAGCCCAGCCTG  492

seq1  AGATGGAATGTGCATGTGCGCTTGGTTTTCATTCTGTCTCAGGTGGTTAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAATGTGCATGTGCGCTTGGTTTTCATTCTGTCTCAGGTGGTTAC  542

seq1  TCTGTCCTTTCCCCAAAGGCTGAGACCTGATCTCAGTCTGTCAAGACTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTTTCCCCAAAGGCTGAGACCTGATCTCAGTCTGTCAAGACTGG  592

seq1  CTAGTTTTAAAGGGATCGACAAAGGAAATGAAGAGGGAAGGCTCAATCAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTTAAAGGGATCGACAAAGGAAATGAAGAGGGAAGGCTCAATCAC  642

seq1  TTCAGTATGAGAACACTTCAGCAAAGCATTTGTGTAAACAAAGGTCTTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTATGAGAACACTTCAGCAAAGCATTTGTGTAAACAAAGGTCTTAT  692

seq1  AAAGAGTTACACATTTACAGAAAAGTCCTACAAAGTGGGGGAGATAAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTACACATTTACAGAAAAGTCCTACAAAGTGGGGGAGATAAAAA  742

seq1  TATTTTAGTTCCTTGTTTTAAGCACATTTTATAATATTTGATAACAATGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGTTCCTTGTTTTAAGCACATTTTATAATATTTGATAACAATGA  792

seq1  TTAATATTTAATGTTTCTTGTAAGAGAAAATATAGGAGGTGTTGGAGGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTTAATGTTTCTTGTAAGAGAAAATATAGGAGGTGTTGGAGGAA  842

seq1  GTAGTAGGTGATAAATACAATCAAAATATACTACATGTGAAAATTTCAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAGGTGATAAATACAATCAAAATATACTACATGTGAAAATTTCAGA  892

seq1  GATTAATAAAATATGTATGTATTTAAAATTTAAAACAAAAAATGTAAATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATAAAATATGTATGTATTTAAAATTTAAAACAAAAAATGTAAATA  942

seq1  GTGGTGATAATTATGAGGAAAACGAAGGATGTAAGAAAATGGAAAGGAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGATAATTATGAGGAAAACGAAGGATGTAAGAAAATGGAAAGGAAT  992

seq1  ATTTTTGATAAGGTATTAGAAAAACTCACTCAGCTGATATTTGAGCAGCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGATAAGGTATTAGAAAAACTCACTCAGCTGATATTTGAGCAGCA  1042

seq1  ACGTTGCAGATTTCAAAGATAGACAAGTATAAAATCTAGGGAATAGAATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGCAGATTTCAAAGATAGACAAGTATAAAATCTAGGGAATAGAATT  1092

seq1  C  1100
      |
seq2  C  1093