BAC Information

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BAC

Clone NameB6Ng01-266J12
Chromosome10 (Build37)
Map Location 98,630,517 - 98,775,793
singlet/doubletdoublet
Overlap geneWdr51b, Dusp6, LOC100042222
Upstream geneEG667438, EG432494, Atp2b1, Galnt4
Downstream geneGad1-ps, LOC100042232, LOC667502, Csl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266J12.bB6Ng01-266J12.g
ACCGA069951GA069952
length990443
definitionB6Ng01-266J12.b B6Ng01-266J12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,774,795 - 98,775,793)(98,630,517 - 98,630,964)
sequence
gaattctccacaggtaagttatggaaggttgcggaatttcaattaagtgg
ttgaaatttaaacagagcctttgaatcctggtaggatttgcttagatctt
aattatctatggccccagtatttgcctagtgaaaccttttaataaaacct
attttgttgtaatatctgaggtcagcttaaaaataggaaaggcttatttt
gcatcatggttttggctccattgcttctgggtctaaatagttcattatgg
aaggagttcaatggtgaccttgtggctagacaaagaaaagaaaagaaaag
aaaagaaaagaaaagaaaagaaaagaaaagaaaagaaggaaaggaaagga
aaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaagga
aaggaaaggaaaggaaaggaaaggaaaggaaagaaaaggcttggaatctc
aagagtttcttcaagaagtcttcccaatgacctaactttctcccacttgg
cccacatcgtatgtactatatgatctcctggtagaaccttgggctaggga
ccaagtctttcacacctgagcatttggggagcacttaagatccacatcat
agtaccattgactgtagaaatgggcctaccccaaaaatacagttatcaga
attttgctatgtatcagaaatttaaaaaaaaaaaaacttgtaagaagatt
ataaaataccatgagttgctatggaagataaagttttacacatattggaa
aaaaaaaaacttccagaattttattaattgaaattagcaaatactttttg
tatatttaccagtagttgaggctttcccctgaattttgaagaactactac
agttttgtgaatttattcaaaatatagaagctattgattggagtgctaca
gtaatataaaccaacccttatgcttcatgtgataagtgagagatgaccga
ctcgacgggactctgctcaggtaagctacatctgtgacga
aacctctggtttctacatttacctacatactgccaactacaggcatatac
accccacccccaccacaccacaccacacccacacacacacacaaagaaac
ctgttaccttcaggtaaattgtagtcttaaagttttttgacggtttgggg
tttttgttattgttgttgtttggggggttttggttttgttttgtcttttg
agacagggcttttctgtatagccctggctgccctggaactctctctgtag
tccaggctggcctatagctcagaaatccctctgcctctgcctcataattg
ctgggattaaaggtgtgcgccaccacccacaacttagcctactgtattca
ttttaatatttgtcctaaaagtacatgaagaaactgaagtctgaactatc
accgtcttttctgtggattggtaaaacactggattccttatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98774795_98775793
seq2: B6Ng01-266J12.b_47_1036 (reverse)

seq1  TCGTCACAAGAATGTAAGCTT-CCTGAGCAGAGTCCCTTTGAGTCTGTTT  49
      ||||||||   |||| ||||| ||||||||||||||| | ||||| | | 
seq2  TCGTCACA--GATGT-AGCTTACCTGAGCAGAGTCCCGTCGAGTC-GGTC  46

seq1  ATCTCTCACTTATCAACATTGAGCATAAGGG-TGGTTAATATTACTGTTA  98
      |||||||||||||| ||||  |||||||||| ||||| ||||||||| ||
seq2  ATCTCTCACTTATC-ACATGAAGCATAAGGGTTGGTTTATATTACTG-TA  94

seq1  GCCACTCCAAACAAATAGCTTCTATATTTTGAATAAATTCACAAAACTGT  148
      | |||||||| | |||||||||||||||||||||||||||||||||||||
seq2  G-CACTCCAATC-AATAGCTTCTATATTTTGAATAAATTCACAAAACTGT  142

seq1  AGTAGTTCTTCAAAATTCAGGGGAAAGCCTCAACTACTGGTAAATATACA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTCTTCAAAATTCAGGGGAAAGCCTCAACTACTGGTAAATATACA  192

seq1  AAAAGTATTTGCTAATTTCAATTAATAAAATTCTGGAAG-TTTTTTTTTT  247
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAAAGTATTTGCTAATTTCAATTAATAAAATTCTGGAAGTTTTTTTTTTT  242

seq1  CCAATATGTGTAAAACTTTATCTTCCATAGCAACTCTTGGTATTTTATAA  297
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCAATATGTGTAAAACTTTATCTTCCATAGCAACTCATGGTATTTTATAA  292

seq1  TCTTCTTACAAG-TTTTTTTTTTTTAAATTTCTGATACATAGCAAAATTC  346
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTACAAGTTTTTTTTTTTTTAAATTTCTGATACATAGCAAAATTC  342

seq1  TGATAACTGTATTTTTGGGGTAGGCCCATTTCTACAGTCAATGGTACTAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACTGTATTTTTGGGGTAGGCCCATTTCTACAGTCAATGGTACTAT  392

seq1  GATGTGGATCTTAAGTGCTCCCCAAATGCTCAGGTGTGAAAGACTTGGTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGATCTTAAGTGCTCCCCAAATGCTCAGGTGTGAAAGACTTGGTC  442

seq1  CCTAGCCCAAGGTTCTACCAGGAGATCATATAGTACATACGATGTGGGCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCCCAAGGTTCTACCAGGAGATCATATAGTACATACGATGTGGGCC  492

seq1  AAGTGGGAGAAAGTTAGGTCATTGGGAAGACTTCTTGAAGAAACTCTTGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGAGAAAGTTAGGTCATTGGGAAGACTTCTTGAAGAAACTCTTGA  542

seq1  GATTCCAAGCCTTTTCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC  596
      |||||||||||||||     ||||||||||||||||||||||||||||||
seq2  GATTCCAAGCCTTTT-----CTTTCCTTTCCTTTCCTTTCCTTTCCTTTC  587

seq1  CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC  637

seq1  CTTTCCTTTCCTTTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTCCTTTCCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCT  687

seq1  TTTCTTTTCTTTTCTTTTCTTTGTCTAGCCACAAGGTCACCATTGAACTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTTTTCTTTTCTTTGTCTAGCCACAAGGTCACCATTGAACTC  737

seq1  CTTCCATAATGAACTATTTAGACCCAGAAGCAATGGAGCCAAAACCATGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATAATGAACTATTTAGACCCAGAAGCAATGGAGCCAAAACCATGA  787

seq1  TGCAAAATAAGCCTTTCCTATTTTTAAGCTGACCTCAGATATTACAACAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAATAAGCCTTTCCTATTTTTAAGCTGACCTCAGATATTACAACAA  837

seq1  AATAGGTTTTATTAAAAGGTTTCACTAGGCAAATACTGGGGCCATAGATA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGTTTTATTAAAAGGTTTCACTAGGCAAATACTGGGGCCATAGATA  887

seq1  ATTAAGATCTAAGCAAATCCTACCAGGATTCAAAGGCTCTGTTTAAATTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGATCTAAGCAAATCCTACCAGGATTCAAAGGCTCTGTTTAAATTT  937

seq1  CAACCACTTAATTGAAATTCCGCAACCTTCCATAACTTACCTGTGGAGAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACTTAATTGAAATTCCGCAACCTTCCATAACTTACCTGTGGAGAA  987

seq1  TTC  999
      |||
seq2  TTC  990

seq1: chr10_98630517_98630964
seq2: B6Ng01-266J12.g_69_517

seq1  GAATTCAACCTCTGGTTTCTACATTTACCTACATACTGCCAACTACAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCTCTGGTTTCTACATTTACCTACATACTGCCAACTACAGGC  50

seq1  ATATACACCCCACCCCCACCACACCACACCACACCCACACACACACACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACCCCACCCCCACCACACCACACCACACCCACACACACACACAA  100

seq1  AGAAACCTGTTACCTTCAGGTAAATTGTAGTCTTAAAGTTTTTTGACGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCTGTTACCTTCAGGTAAATTGTAGTCTTAAAGTTTTTTGACGGT  150

seq1  TTGGGGTTTTTGTTATTGTTGTTGTTTGGGGGGTTTTGGTTTTGTTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTTTTTGTTATTGTTGTTGTTTGGGGGGTTTTGGTTTTGTTTTGT  200

seq1  CTTTTGAGACAGGGCTTTTCTGTATAGCCCTGGCTGCCCTGGAACTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAGACAGGGCTTTTCTGTATAGCCCTGGCTGCCCTGGAACTCTCT  250

seq1  CTGTAGTCCAGGCTGGCCTATAGCTCAGAAATCCCTCTGCCTCTGCCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTCCAGGCTGGCCTATAGCTCAGAAATCCCTCTGCCTCTGCCTCA  300

seq1  TAAGTGCTGGGATTAAAGGTGTGCGCCACCACCCACAACTTAGCCTACTG  350
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCTGGGATTAAAGGTGTGCGCCACCACCCACAACTTAGCCTACTG  350

seq1  TATTCATTTTATTATTTGTCCTAAAAGTAGATGAAGAAACTGAAGTCAGA  400
      ||||||||||| ||||||||||||||||| ||||||||||||||||| ||
seq2  TATTCATTTTAATATTTGTCCTAAAAGTACATGAAGAAACTGAAGTCTGA  400

seq1  ACTCTCACCGTC-GTTCTGTGGATTGCTAAAACACTGGATTCCTTATCT  448
      ||| ||||||||  |||||||||||| ||||||||||||||||||||||
seq2  ACTATCACCGTCTTTTCTGTGGATTGGTAAAACACTGGATTCCTTATCT  449