BAC Information

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BAC

Clone NameB6Ng01-268H19
Chromosome10 (Build37)
Map Location 14,903,779 - 14,904,542
singlet/doubletsinglet
Overlap genenone
Upstream geneGpr126, LOC100039571, LOC100039409, Vta1, D230044M03Rik, EG666904, Nmbr, LOC666917
Downstream geneLOC637043, LOC100039492, LOC671439
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268H19.bB6Ng01-268H19.g
ACCGA071329GA071330
length1,200766
definitionB6Ng01-268H19.b B6Ng01-268H19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatatttccaagacttttatcatgagtgggtgttggatcttg
tcgaatgctttttccgcatctaaggagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacgttgatggatttccagatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagggaaattggtctgaagttctctatctttgttggat
ctttctgtggcttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagttacctctgcttctattttgtggaatactttgtgcagaactgg
aattagatcttctttgaaggtctggtagaactctgcactaaacccgtctg
gtcctgggctctttttttttttttttttttggctgggagactattaatga
ctgtttctatttctttaggggatatgggactgtttagatcgttaacttga
tcctgatttaactttggtacctggtatctgtctagaaatttgtccatttt
gtccaggttttccagttttgctgagtatagccttttgtagaaggatctga
tggtgttttggatttcttcaggatctgttgttatgtctccctttccattt
ctgattttgttaattaggatgctgtccctgtgccctctagtgagtctagt
taagggtttaatctatcttgttgattttctcaaagaaccaaatcctcgtt
tggttaattgtttgaatagttcttgtttccacttggttaatttcacccct
gagtttgattaattcctgccttctactcctcttgggtgaaatttcttcct
tttttccagaaccttagatgtgttgtcaagcggctagtgtgtgctttctc
agtttcttcttgaagcactcagcgctatgagtttccctctacaaatgctt
tcatgtgtccataggtttggtatgttcaagctcatttcataaacctctaa
aaagtctaatttctttcttattctttccttgaacaagattcattgagaaa
agaggtttcagttccaatgtgaagtgtggcctttcctatatacgtgatcg
gaataggcttagactagtgtctgaatagactagatccatgggcaagatat


gaattcacatatttattgtcagtatcagattctagaatacagtggatcct
gtaaaattgtgctagtctaaagaaaactcatgtgtaagcttacagtatga
aaacaaggccctttttgaatccacatacaaaaagcttagctatttatcat
ttttcacaggatttacttaagcaagttttcaaataaaatgtcaaacaaga
aaagtctaaaaatgaaaaaaaaatctcagcacaatatcctacaaatacct
atgaaagaagagaagctatatatcagaaaagcaggtttcattgcatgcac
atgcagacacacacacacacacacacacacacacacacagggagggaggc
aaggagggagggagggagagagagagagacagagagagagagagagagag
agagagacagagacagggagagagagagagatagaatacatatctaaaga
gcacatcatgaacttcaatccaaaagcaataagcagtaactagaaattgt
tgtcattattgctatattggaagggaggaatgcatatgatactgattcag
aatgaaaacaaagtacttattaatccttgaatcttggagaattttcccca
agagagccaacaactgtgtccagggcagccaagatggaatatatgattta
gtaactattaattcaggattatcagaaggaggtatatttttttaaataat
ttttattaggtattttcctcatttacatttccaatgctatcccaaaaagt
cccccataaccaccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_14903779_14904542
seq2: B6Ng01-268H19.g_65_829

seq1  GAATTCACATATTTATTGTCAGTATCAGATTCTAGAATACAGTGGATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATATTTATTGTCAGTATCAGATTCTAGAATACAGTGGATCCT  50

seq1  GTAAAATTGTGCTAGTCTAAAGAAAACTCATGTGTAAGCTTACAGTATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATTGTGCTAGTCTAAAGAAAACTCATGTGTAAGCTTACAGTATGA  100

seq1  AAACAAGGCCCTTTTTGAATCCACATACAAAAAGCTTAGCTATTTATCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGGCCCTTTTTGAATCCACATACAAAAAGCTTAGCTATTTATCAT  150

seq1  TTTTCACAGGATTTACTTAAGCAAGTTTTCAAATAAAATGTCAAACAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACAGGATTTACTTAAGCAAGTTTTCAAATAAAATGTCAAACAAGA  200

seq1  AAAGTCTAAAAATGAAAAAAAAATCTCAGCACAATATCCTACAAATACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTAAAAATGAAAAAAAAATCTCAGCACAATATCCTACAAATACCT  250

seq1  ATGAAAGAAGAGAAGCTATATATCAGAAAAGCAGGTTTCATTGCATGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGAAGAGAAGCTATATATCAGAAAAGCAGGTTTCATTGCATGCAC  300

seq1  ATGCAGACACACACACACACACACACACACACACACACAGGGAGGGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGACACACACACACACACACACACACACACACACAGGGAGGGAGGC  350

seq1  AAGGAGGGAGGGAGGGAGAGAGAGAGAGACAGAGAGAGAGAGAGAGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGGAGGGAGGGAGAGAGAGAGAGACAGAGAGAGAGAGAGAGAGAG  400

seq1  AGAGAGACAGAGACAGGGAGAGAGAGAGAGATAGAATACATATCTAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACAGAGACAGGGAGAGAGAGAGAGATAGAATACATATCTAAAGA  450

seq1  GCACATCATGAACTTCAATCCAAAAGCAATAAGCAGTAACTAGAAATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATCATGAACTTCAATCCAAAAGCAATAAGCAGTAACTAGAAATTGT  500

seq1  TGTCATTATTGCTATATTGGAAGGGAGGAATGCATATGATACTGATTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTATTGCTATATTGGAAGGGAGGAATGCATATGATACTGATTCAG  550

seq1  AATGAAAACAAAGTACTTATTAATCCTTGAATCTTGGAGAATTTTCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAACAAAGTACTTATTAATCCTTGAATCTTGGAGAATTTTCCCCA  600

seq1  AGAGAGCCAACAACTGTGTCCAGGGCAGCCAAGATGGAATATATGATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCCAACAACTGTGTCCAGGGCAGCCAAGATGGAATATATGATTTA  650

seq1  GTAACTATTAATTCAGGATTATCAGAAGGAGGTATATTTTTTTAAATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTATTAATTCAGGATTATCAGAAGGAGGTATATTTTTTTAAATAAT  700

seq1  TTTTATTAGGTATTTTCCTCATTTACATTTCCAATGCTATCCC-AAAAGT  749
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTTTATTAGGTATTTTCCTCATTTACATTTCCAATGCTATCCCAAAAAGT  750

seq1  CCCCCATAACCACCC  764
      |||||||||||||||
seq2  CCCCCATAACCACCC  765


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