BAC Information

Click to search

BAC

Clone NameB6Ng01-269F06
Chromosome10 (Build37)
Map Location 104,140,583 - 104,141,682
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269F06.bB6Ng01-269F06.g
ACCGA071956GA071957
length1,0951,086
definitionB6Ng01-269F06.b B6Ng01-269F06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatgcaaatactaggttcctttgatgacaaaagtgttggaat
tttttttaaattaaacctcaagcaaagcaagcatatatatatatatatat
atttttttttttgtcacacttcatatattgcccacgtgtacttcgtgcag
catggtctcagcccacaaatattcttctctgcctaagtattaatagcata
ttgactcaagtataaccactacataggactacctagcacttacacttctt
tagttaataaaacattgttgaccaatcaaaacaaccaagtcccattgagg
cataacagaactcatgaaagtgatatgaaattgtgtaatataatgcaaat
atttctaagtcagcatcatcagaaaccccaacccttacttgtttggaaaa
gagaaagtagcatttagcagacaatttattaaaaaaaaaaatctgtgttt
aaagataacgtatcctgctcacattacatcagcatctctagtaggctagg
ttttacattgtgtattaatttaaaggccttaacttctgttactatatgtt
tttagatcctttgaagaaactgctcatagaatatcttcagcatattctaa
gtttttattaagaaaagaaaggtgttcaacatttcatccctattgtaaaa
ctgtcaagtcagctcagacaacagaaacagacaagaactggccttccagc
ttaaatggctcttaaaacttggattcacaaagtggccatttggagaaaaa
taccagatgtccttccttaactacacaaaaactaaatctattacccaagt
tcttttttccaaaacatcctaccaaaaaaaacaaaacaacaacacaaaaa
aaaacaaaacaaaaaacaaaaaaaacaaaaaaaaaaaaacccttttttca
attaaatcaaacttttaaaacttaaaagaaaaagaaaaaaattataaccc
ttgcacttcaaggaattttattgttctggattagatcaaacatgttattc
cagattacaatattgatgatatctataattgagtacctactccctctgat
ttataagatcactaactactttcttttaatcttacaagctattga

gaattctttttgttttgcctaagcttaaatatggtttctttctccactga
gaatcctttggaaagaacagtgtttatttgcaaatggttatcagttggag
aaagcttctggtttagggatagggaggggcatgtgtctacttctttcagc
tctagggttccatctgttgcagaactgcacaggcctatggatattatgac
agttgttgtgagttttatgtgagtaggtcatgctttatttaattcttgtt
ttctcagtgatcattccccccctggctctgacaatcttgagtttcctaag
ccctgaagtgagggtttgatggaaacatcctctttaaggtggtgttcgcc
aagatctctcacactctgagagtggctgagaaaggcatagcaaaatgttg
ctaagaactttttttttctactttcctttagtagaactgctgtatttgat
ttttctctaggcctctgtgtgatctagattcaggttcttgcccacataag
cagtgataggtatgggtcctgtctctgtactggtccttaaataaaaacag
atcttggtttttttatttccaaaagtttcaggctgctgttgcatcagtgt
ttcttgcaggtaagtcaccattttgagttgggttggtatttaagtctctt
ttggcagcatgcagagtatcatctagtatgttagtctgtagcaatgaaac
tctaggtaggtatcagctcaagttctctatgttcaatgtgttttgtaggt
gagcttttcagcaatggggccctacagtcatgttggagagagcaaccaat
agacttgggaagagccctgagttattttgcagtttctcatgggacaactt
ttgggctaagcaacttgatttagaatgtaatccatttcttggtactggaa
gttttcattttaagaattgtccagttagggacctctgttttcctgttatt
ggaaaattttctttcaattgaacttcatatattttataatttcatattta
agttcatatggtttatatattttggatattctactatggtatatttacac
catgaacccttcaaaagaacttcccctttctttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104140583_104141682
seq2: B6Ng01-269F06.b_46_1140

seq1  GAATTCTTTATGCAAATACTAGGTTCCTTTGATGACAAAAGTGTTGGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATGCAAATACTAGGTTCCTTTGATGACAAAAGTGTTGGAAT  50

seq1  TTTTTTTAAATTAAACCTCAAGCAAAGCAAGCATATATATATATATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAATTAAACCTCAAGCAAAGCAAGCATATATATATATATATAT  100

seq1  ATTTTTTTTTTTGTCACACTTCATATATTGCCCACGTGTACTTCGTGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTTTGTCACACTTCATATATTGCCCACGTGTACTTCGTGCAG  150

seq1  CATGGTCTCAGCCCACAAATATTCTTCTCTGCCTAAGTATTAATAGCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCTCAGCCCACAAATATTCTTCTCTGCCTAAGTATTAATAGCATA  200

seq1  TTGACTCAAGTATAACCACTACATAGGACTACCTAGCACTTACACTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCAAGTATAACCACTACATAGGACTACCTAGCACTTACACTTCTT  250

seq1  TAGTTAATAAAACATTGTTGACCAATCAAAACAACCAAGTCCCATTGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAATAAAACATTGTTGACCAATCAAAACAACCAAGTCCCATTGAGG  300

seq1  CATAACAGAACTCATGAAAGTGATATGAAATTGTGTAATATAATGCAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACAGAACTCATGAAAGTGATATGAAATTGTGTAATATAATGCAAAT  350

seq1  ATTTCTAAGTCAGCATCATCAGAAACCCCAACCCTTACTTGTTTGGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAAGTCAGCATCATCAGAAACCCCAACCCTTACTTGTTTGGAAAA  400

seq1  GAGAAAGTAGCATTTAGCAGACAATTTATTAAAAAAAAAAATCTGTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGTAGCATTTAGCAGACAATTTATTAAAAAAAAAAATCTGTGTTT  450

seq1  AAAGATAACGTATCCTGCTCACATTACATCAGCATCTCTAGTAGGCTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAACGTATCCTGCTCACATTACATCAGCATCTCTAGTAGGCTAGG  500

seq1  TTTTACATTGTGTATTAATTTAAAGGCCTTAACTTCTGTTACTATATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATTGTGTATTAATTTAAAGGCCTTAACTTCTGTTACTATATGTT  550

seq1  TTTAGATCCTTTGAAGAAACTGCTCATAGAATATCTTCAGCATATTCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATCCTTTGAAGAAACTGCTCATAGAATATCTTCAGCATATTCTAA  600

seq1  GTTTTTATTAAGAAAAGAAAGGTGTTCAACATTTCATCCCTATTGTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTATTAAGAAAAGAAAGGTGTTCAACATTTCATCCCTATTGTAAAA  650

seq1  CTGTCAAGTCAGCTCAGACAACAGAAACAGACAAGAACTGGCCTTCCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAAGTCAGCTCAGACAACAGAAACAGACAAGAACTGGCCTTCCAGC  700

seq1  TTAAATGGCTCTTAAAACTTGGATTCACAAAGTGGCCATTTGGAGAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGGCTCTTAAAACTTGGATTCACAAAGTGGCCATTTGGAGAAAAA  750

seq1  TACCAGATGTCCTTCCTTAACTACACAAAAACTAAATCTATTACCCAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGATGTCCTTCCTTAACTACACAAAAACTAAATCTATTACCCAAGT  800

seq1  TCTTTTTTCCAAAACATCCTACCAAAAAAAACAAAACAACAACAACAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCTTTTTTCCAAAACATCCTACCAAAAAAAACAAAACAACAAC-ACAAAA  849

seq1  AAAAACAAAAACAAAAAAACAAAAAAAACAAAAAAAAAAAA--CACTTTT  898
      ||||||||||   ||||||||||||||||||||||||||||  |  ||||
seq2  AAAAACAAAA--CAAAAAACAAAAAAAACAAAAAAAAAAAAACCCTTTTT  897

seq1  TCAATTAAATCAAACTTTAAAAACTTAAAAGAAAAAGAAAAAAATTATAA  948
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCAATTAAATCAAACTTTTAAAACTTAAAAGAAAAAGAAAAAAATTATAA  947

seq1  CCCTTGCACTTCAAGGAATTTTATTGTTCTGGATTAGATCAAACATGTTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGCACTTCAAGGAATTTTATTGTTCTGGATTAGATCAAACATGTTA  997

seq1  TCCAAGATAACAATATTGATGATATCTAATAATTGAGTACCTACTCTCTC  1048
      | | |||| |||||||||||||||||| |||||||||||||||||| |||
seq2  TTCCAGATTACAATATTGATGATATCT-ATAATTGAGTACCTACTCCCTC  1046

seq1  TGA-TTATAAGATTCACTACATACTTTCTTTTTAATCCTTACAAAACTAT  1097
      ||| |||||||| ||||||  ||||||| ||||||| ||||| || ||||
seq2  TGATTTATAAGA-TCACTAACTACTTTC-TTTTAAT-CTTAC-AAGCTAT  1092

seq1  TGA  1100
      |||
seq2  TGA  1095


| Home | SequenceCutter | Blast | Download |