BAC Information

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BAC

Clone NameB6Ng01-269H14
Chromosome10 (Build37)
Map Location 3,041,569 - 3,042,656
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneCnksr3, Oprm1, A130090K04Rik, LOC237252, LOC100041224
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269H14.bB6Ng01-269H14.g
ACCGA072065GA072066
length1,2371,073
definitionB6Ng01-269H14.b B6Ng01-269H14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtctttgagggatgctgtcaatgaagacctagcggcaatagag
aagtccattgacgctttagaaaaatctttgacctccctgtctgaggtagt
tttacagaacaggagaggtcttgatttgttgttcctaaaggaaggaggac
tgtgtgctgcccttaaagaagagtgctgcttctatgcagatcatacagga
atagttagagactctatgcagaaactgagagaaagattagagcgaaggaa
acgggaatgggatgctcaacgggggtggtttgagtcggggtttgaatcac
gaccatcttggataacttctttaatttccgctgtagccggaccaatcctt
atgatatgcttagctttagttttcggcccttgtataataaatagaggaat
ggctttcatccagagtaaaattgatacagtaaaactcatggttcttcaaa
ggcaatatcaacctatagttcaggtagatgaagagttaggggacaccaat
ctctaaaattctatgattagaattagtctaaacagaagaagaggggaatg
aaaggaaataaaactgtaattcatgtaatgtatgttaaatagcccaaaga
gttgtttctgagctttgaaacctggggctgagaacatagcagaacagacc
aggacatgcccgggcaagcccatcgcctccctagctcccacccctctgac
ctaagttaaatgttacaggctgctgatgtttaaatggaccaatcatgtga
aaccgcgccaattcctcccccagccccactccttttctataaaaacccct
agcttccaagcctcgtggtcgaatccactgtctcctgttatgtgagatac
gtttcgacccggagctccgccattaaaaaacctcttgttgttacaatcca
gggtgttgtgttctatttcgtgatttcctgggtgcacgcccgaatcggga
gctgagtgggggttttccccaccggggttttccccactgaagttctttcc
acttttcattttgaaaactccagctctaaactccgaagagggacttacat
ttcattctttccattagacccaggaagacctcccaggaatgttgattttt
ggcccatatccctggacacacggaactatccacagattggaaagtcctgg
tcaagttctctatcgatccggagcctcctaacttagagatcttggactgt
acaccaagaaatagggtcgccaactctaatatgagct

gaattcactgtgtaatcctgactggccttcgctcctgcctctgcttccca
aatgctagaagtacaggcatgagccaccacacctggcctatagttgtaaa
tacaatccaatttgcttagtgtcttagattgttctttaagcaacagtacc
cagcctgcctttgacaagctgttatggtctatcaagtagaaacttgagaa
gaactatgaaaaattagacccaagattcgttgtgtttctcatgcgccatg
accagcctatgagcaaattcacaacacattcctgatttaaacacagggac
ccaaatcctcaggaagaattggagacttttttatataaagttttaatttt
tttaaactcctaagggaatcaactgtattaatttgaatacagatatcatc
tctcagcataaactgcaaaacagagtaatatgtgattgtttcttaattaa
cacagaacaggaagggtgtgatggctcactcctttaatcccagcgttcag
gaggcagaggcaggtagatctctgtgagttcaaggccagcctggtctaca
gagtgagtaccaggacagctaaggctacacagagaaaccctgtctcaaaa
aacaaacgagcaaacaaacaaaaagacagaacatttatgctggtttctct
gggatctggggatatgctcagtccttgctgtattacaagcatggggattg
gagttctgaatcaaagcacacgtaaactgctcttcatgatgagcttgtgg
tcctcgcctggggaaggcagagaggggggaatccctgaaacttgctaccc
agctaatcttactgtatccttgagccctgggttcaatcagagacattgtc
ttaaaaaaagaaaaagaaagcctttaatcccagtactcgggaggcagaaa
gcagcagatttctgagttcgaggccagcctggtctacaaagtgattccag
gacagccaggactgtacagagaaaccctgtctccaaaaagaaaaaaagaa
aaaaagaaaaagaaacatgtagagtgataggagatacttacatgacctct
gtctccaccatagctggtgctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_3041569_3042656
seq2: B6Ng01-269H14.g_67_1139 (reverse)

seq1  TGAGCACACACCTATGTGTGGAGACCAGAGGTCATGTAAGGTATCTTCCC  50
      ||||||| || ||||| ||||||| |||||||||||||| ||||||  ||
seq2  TGAGCAC-CAGCTATG-GTGGAGA-CAGAGGTCATGTAA-GTATCT--CC  44

seq1  TAATCACTCTACATCCTTTTTCTTTTTTCTTTTTTTTTCTTTTTTTCTTT  100
      | |||||||||||   | ||||||||   | |||||||||||||||| ||
seq2  T-ATCACTCTACA---TGTTTCTTTT---TCTTTTTTTCTTTTTTTC-TT  86

seq1  TTTGGAGACAGGGTTTCTCTGTACAGTCCTGGCTGTCCTGGAATTCACTT  150
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTTGGAGACAGGGTTTCTCTGTACAGTCCTGGCTGTCCTGGAA-TCACTT  135

seq1  TGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGC-TTCTGCCTCC  199
      |||||||||||||||||||||||||||||||||| |||| ||||||||||
seq2  TGTAGACCAGGCTGGCCTCGAACTCAGAAATCTG-CTGCTTTCTGCCTCC  184

seq1  CGAGTACTGGGATTAAAGGCTTTCTTTTTCTTTTTTTAAGACAATGTCTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTACTGGGATTAAAGGCTTTCTTTTTCTTTTTTTAAGACAATGTCTC  234

seq1  TGATTGAACCCAGGGCTCAAGGATACAGTAAGATTAGCTGGGTAGCAAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGAACCCAGGGCTCAAGGATACAGTAAGATTAGCTGGGTAGCAAGT  284

seq1  TTCAGGGATTCCCCCCTCTCTGCCTTCCCCAGGCGAGGACCACAAGCTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGATTCCCCCCTCTCTGCCTTCCCCAGGCGAGGACCACAAGCTCA  334

seq1  TCATGAAGAGCAGTTTACGTGTGCTTTGATTCAGAACTCCAATCCCCATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAGAGCAGTTTACGTGTGCTTTGATTCAGAACTCCAATCCCCATG  384

seq1  CTTGTAATACAGCAAGGACTGAGCATATCCCCAGATCCCAGAGAAACCAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAATACAGCAAGGACTGAGCATATCCCCAGATCCCAGAGAAACCAG  434

seq1  CATAAATGTTCTGTCTTTTTGTTTGTTTGCTCGTTTGTTTTTTGAGACAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATGTTCTGTCTTTTTGTTTGTTTGCTCGTTTGTTTTTTGAGACAG  484

seq1  GGTTTCTCTGTGTAGCCTTAGCTGTCCTGGTACTCACTCTGTAGACCAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTCTGTGTAGCCTTAGCTGTCCTGGTACTCACTCTGTAGACCAGG  534

seq1  CTGGCCTTGAACTCACAGAGATCTACCTGCCTCTGCCTCCTGAACGCTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTGAACTCACAGAGATCTACCTGCCTCTGCCTCCTGAACGCTGG  584

seq1  GATTAAAGGAGTGAGCCATCACACCCTTCCTGTTCTGTGTTAATTAAGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAGGAGTGAGCCATCACACCCTTCCTGTTCTGTGTTAATTAAGAA  634

seq1  ACAATCACATATTACTCTGTTTTGCAGTTTATGCTGAGAGATGATATCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCACATATTACTCTGTTTTGCAGTTTATGCTGAGAGATGATATCTG  684

seq1  TATTCAAATTAATACAGTTGATTCCCTTAGGAGTTTAAAAAAATTAAAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAATTAATACAGTTGATTCCCTTAGGAGTTTAAAAAAATTAAAAC  734

seq1  TTTATATAAAAAAGTCTCCAATTCTTCCTGAGGATTTGGGTCCCTGTGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATAAAAAAGTCTCCAATTCTTCCTGAGGATTTGGGTCCCTGTGTT  784

seq1  TAAATCAGGAATGTGTTGTGAATTTGCTCATAGGCTGGTCATGGCGCATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAGGAATGTGTTGTGAATTTGCTCATAGGCTGGTCATGGCGCATG  834

seq1  AGAAACACAACGAATCTTGGGTCTAATTTTTCATAGTTCTTCTCAAGTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACACAACGAATCTTGGGTCTAATTTTTCATAGTTCTTCTCAAGTTT  884

seq1  CTACTTGATAGACCATAACAGCTTGTCAAAGGCAGGCTGGGTACTGTTGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTGATAGACCATAACAGCTTGTCAAAGGCAGGCTGGGTACTGTTGC  934

seq1  TTAAAGAACAATCTAAGACACTAAGCAAATTGGATTGTATTTACAACTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAACAATCTAAGACACTAAGCAAATTGGATTGTATTTACAACTAT  984

seq1  AGGCCAGGTGTGGTGGCTCATGCCTGTACTTCTAGCATTTGGGAAGCAGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGGTGTGGTGGCTCATGCCTGTACTTCTAGCATTTGGGAAGCAGA  1034

seq1  GGCAGGAGCGAAGGCCAGTCAGGATTACACAGTGAATTC  1088
      |||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAGCGAAGGCCAGTCAGGATTACACAGTGAATTC  1073


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