BAC Information

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BAC

Clone NameB6Ng01-269P20
Chromosome10 (Build37)
Map Location 50,637,374 - 50,638,433
singlet/doubletsinglet
Overlap geneSim1
Upstream geneLOC629652, Ascc3
Downstream geneLOC268300, LOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269P20.bB6Ng01-269P20.g
ACCGA072447GA072448
length1,057820
definitionB6Ng01-269P20.b B6Ng01-269P20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaataacattgttgttattggttgttcctataacatttgtgcta
tgattgcactagttggaatatcttatcaataatggtcattcattattgtt
gccctcagaactctaagctagatgagctatctattacctcaaatattcat
tctcttgctttgtgatgacaccattaaaaaatcctatcttgaagagactt
tgaaatatcaaatatattgatgttaacactgactatcctgtcatgtaatg
gaacatcagaatttattattcctatctagttacaactttatgtccataga
ataagctgtcctcattcctctttgtcactttaagctggaattaaagggtc
tgtgccagtgacagcatctgtactggctggttttgtgtcaacttgacaca
agcggagttatcacgaagaaaggagcctcccttgaggaaatgcctccatg
agataaagctgtgaagcattttctcaattagtgatcaaaggtggagggcc
cagcccattgtgggtgatgccatcactgggctggtagtcctgagttgtat
aagaaagcaagctgagcaaggcaggggaagcaagccagtaagcagcacct
ctccatggtctttgcatcagctcctgcatccaaattcctgccctgtgtga
attcttgtcctgaattcctttggtgctgaacagcaatatgaaagtgtaag
ctgaataaaccctttcttccccaacttggttcttggtcatgatgtttgtg
caggaatgcaaaccctgactaagacagcatcttacccttatatgaggatt
tgtttatttatcctttatatgaggatgaaggttcagttggttgagaaaaa
atcagagggggagaattgagttaagtgaggaaggcctgtggtggtcagcc
catccaactccaagatggggtttaatgtgaattcatgatggaaaactaaa
aagctgcctgacatcactttttcagaactgtctgttcagatattaatatt
tgctttaaagcatagtgatgaatattttttatcagagatattaatgaaca
acatata

gaattctttgtttagccctgtgcctgatttttaatggggttatttgattt
tctggaatccagcttcttgagttctatggacatattggcaattagttccc
tatcggatttaggattggtactactcagctattaaaaagaatgaatttat
gaaattcctatgcaaatggctggacctggagggcatcatcctgagtgagg
taacacaatcacaaaagaactcaaatgatatgtactcactgataagtgga
tattagcccagaaacttagtatacccgagatataagagacaatttgtaaa
acacatgaaactgaagaagaacgaagaccaaagtgtggacactttgcccc
ttcttagaattggaaacaatcacccatggaaggagttacagagacaaggt
ttggagctgagacaaaaggatggaccatctagagactgccatatccaggg
atccatcccataattagcctccaaacgatgacaccattgcatacactagc
aagcgtttgctgaaaggaccctgatatagctgtctcttgtgagactaggc
cggggcctagcaaacacagaagtggatgctcacagtcacctattggatgg
atcacagggcccccaatggaggagctagagaaagtatccaaggagctaaa
gagatctgcaaccctataggtgctgagctcttgactctagctgcatatgt
atcaaaagatggcctagtaggccatcactggaaagagaggaccattggac
aggcaaactttatatgccccagtacaggggaatgccagggccaaaaagtg
ggaatgggtggggtagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_50637374_50638433
seq2: B6Ng01-269P20.b_45_1101

seq1  GAATTCTAATAACATTGTTGTTATTGGTTGTTCCTATAACATTTGTGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATAACATTGTTGTTATTGGTTGTTCCTATAACATTTGTGCTA  50

seq1  TGATTGCACTAGTTGGAATATCTTATCAATAATGGTCATTCATTATTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCACTAGTTGGAATATCTTATCAATAATGGTCATTCATTATTGTT  100

seq1  GCCCTCAGAACTCTAAGCTAGATGAGCTATCTATTACCTCAAATATTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCAGAACTCTAAGCTAGATGAGCTATCTATTACCTCAAATATTCAT  150

seq1  TCTCTTGCTTTGTGATGACACCATTAAAAAATCCTATCTTGAAGAGACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGCTTTGTGATGACACCATTAAAAAATCCTATCTTGAAGAGACTT  200

seq1  TGAAATATCAAATATATTGATGTTAACACTGACTATCCTGTCATGTAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATCAAATATATTGATGTTAACACTGACTATCCTGTCATGTAATG  250

seq1  GAACATCAGAATTTATTATTCCTATCTAGTTACAACTTTATGTCCATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCAGAATTTATTATTCCTATCTAGTTACAACTTTATGTCCATAGA  300

seq1  ATAAGCTGTCCTCATTCCTCTTTGTCACTTTAAGCTGGAATTAAAGGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCTGTCCTCATTCCTCTTTGTCACTTTAAGCTGGAATTAAAGGGTC  350

seq1  TGTGCCAGTGACAGCATCTGTACTGGCTGGTTTTGTGTCAACTTGACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCAGTGACAGCATCTGTACTGGCTGGTTTTGTGTCAACTTGACACA  400

seq1  AGCGGAGTTATCACGAAGAAAGGAGCCTCCCTTGAGGAAATGCCTCCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGAGTTATCACGAAGAAAGGAGCCTCCCTTGAGGAAATGCCTCCATG  450

seq1  AGATAAAGCTGTGAAGCATTTTCTCAATTAGTGATCAAAGGTGGAGGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGCTGTGAAGCATTTTCTCAATTAGTGATCAAAGGTGGAGGGCC  500

seq1  CAGCCCATTGTGGGTGATGCCATCACTGGGCTGGTAGTCCTGAGTTGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCATTGTGGGTGATGCCATCACTGGGCTGGTAGTCCTGAGTTGTAT  550

seq1  AAGAAAGCAAGCTGAGCAAGGCAGGGGAAGCAAGCCAGTAAGCAGCACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCAAGCTGAGCAAGGCAGGGGAAGCAAGCCAGTAAGCAGCACCT  600

seq1  CTCCATGGTCTTTGCATCAGCTCCTGCATCCAAATTCCTGCCCTGTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGGTCTTTGCATCAGCTCCTGCATCCAAATTCCTGCCCTGTGTGA  650

seq1  ATTCTTGTCCTGAATTCCTTTGGTGCTGAACAGCAATATGAAAGTGTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGTCCTGAATTCCTTTGGTGCTGAACAGCAATATGAAAGTGTAAG  700

seq1  CTGAATAAACCCTTTCTTCCCCAACTTGGTTCTTGGTCATGATGTTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATAAACCCTTTCTTCCCCAACTTGGTTCTTGGTCATGATGTTTGTG  750

seq1  CAGGAATGCAAACCCTGACTAAGACAGCATCTTACCCTTATATGAGGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATGCAAACCCTGACTAAGACAGCATCTTACCCTTATATGAGGATT  800

seq1  TGTTTATTTATCCTTTATATGAGGATGAAGGTTCAGTTGGTTGAGAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTTATCCTTTATATGAGGATGAAGGTTCAGTTGGTTGAGAAAAA  850

seq1  ATCAGAGGGGGAGAATTGAGTTAAGTGAGGAAGGCCTGTGGTGGTCAGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGGGGGAGAATTGAGTTAAGTGAGGAAGGCCTGTGGTGGTCAGCC  900

seq1  CATCCAACTCCAAGATGGGGTTTAATGTGAATTCATGATGGAAAACTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAACTCCAAGATGGGGTTTAATGTGAATTCATGATGGAAAACTAAA  950

seq1  AAGCTGCCTTGACATCACTTTTTCAGAACTGTCTGTTCAGATATTAATAT  1000
      |||||||| |||||||||||||||||||||||||||||||||||||||| 
seq2  AAGCTGCC-TGACATCACTTTTTCAGAACTGTCTGTTCAGATATTAATA-  998

seq1  TTTGCTTTTAAAGCATAGTGATG-ATATTTTTTATCAGAGATATTTAATG  1049
      ||||| ||||||||||||||||| ||||||||||||||||||| ||||||
seq2  TTTGC-TTTAAAGCATAGTGATGAATATTTTTTATCAGAGATA-TTAATG  1046

seq1  AACAACATATA  1060
      |||||||||||
seq2  AACAACATATA  1057


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