BAC Information

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BAC

Clone NameB6Ng01-270B15
Chromosome10 (Build37)
Map Location 13,924,507 - 14,037,519
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC666829, Phactr2, LOC100039475, Fuca2, Pex3, Deadc1, Aig1, EG666859, Hivep2
Downstream geneGpr126, LOC100039571, LOC100039409, Vta1, D230044M03Rik, EG666904, Nmbr, LOC666917
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270B15.bB6Ng01-270B15.g
ACCGA072531GA072532
length3691,093
definitionB6Ng01-270B15.b B6Ng01-270B15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,037,151 - 14,037,519)(13,924,507 - 13,925,594)
sequence
ttcagttgtagctgaacttaccacacaatccacaaaataatgaagaaatg
tttcatccctgagctggatgcaaaacataaaacagtgcagtcttcaagtg
gctcactctccaagggaagagacacagaacaaggctatacagcatgtcca
gtgctacaaacggagtgacttgcaagcacagaaagaactctttcacagaa
cgcatccagcttttcttcagatagtgagaagactttgagactatgacata
attcctgactgagagtgagctacagtaagaaactgggtcaaaatatcagg
gagacaagatggcagacagcaggtgacatttggtagagatggtatcaagt
gtgtgtgtggggggggggg

gaattctaagaacataccatgagttttgggcatgcagacacacatctgca
atcctcggccttgagaagtagaggcaggaggttcaggagttcaagactac
cctcagctgcaatgtgattctgaggccagccttggctacatgaggtcctt
tcttacaaaaaagggaatatgcaaaaatgaggaaacatggtgctgaaaaa
gtatatagcaacatgcaaaagggtggataaagaccccttctttatcttat
aatgtttgcagagagagagagaggcagagacagacagagagacagagaca
gagagaggcctttaagaagaaatgtgatctagattaagatctgaagaaga
aatgaaatttataggtgttaaattcaacccattgcctcagtctactgaga
aatgcttacatgtcagtctgacgtgtgtacgctttcatttcatttctctt
tctgaattacagaaataatcatctgagttgtagacaaatgtcaccattta
tgtgcacaacatggccagggaccagttttgattgtactccagatcctctc
atgaacatttccagatccctctggtgccttcctttagtacacccttttat
tttgatattttactttaggtgtctgtgctttttgtatgtgcattaacatg
ggtgcatgtgtgttaccactctatgtgcacacatgtgatggccaagtgtc
aacctctgttgtcttcctcagatgctttcaacctttgtttcatctactaa
ttaaaattattcattgacaattttacacacacacacacacacacacacac
acacacacacacacacactgcatcctgagtactctcattctcctctgtaa
cctgtctctgtgaccttctctgtccccacagaagttggtaccaggattgg
ttctagaggaacagaagtataagaatgaatcttttaaaaatactggggct
attgatgctggttagctggagctaagaaattagcggtgattaagaagaga
ccaccatcattgagtgacatctttcttggtgtgtttttctgagagcacca
gaaggctgtgttccagaagaatagcccaagattgtaccatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_14037151_14037519
seq2: B6Ng01-270B15.b_52_420 (reverse)

seq1  CCCCCCCCCCCACACACACACTTGATACCATCTCTACCAAATGTCACCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCACACACACACTTGATACCATCTCTACCAAATGTCACCTG  50

seq1  CTGTCTGCCATCTTGTCTCCCTGATATTTTGACCCAGTTTCTTACTGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGCCATCTTGTCTCCCTGATATTTTGACCCAGTTTCTTACTGTAG  100

seq1  CTCACTCTCAGTCAGGAATTATGTCATAGTCTCAAAGTCTTCTCACTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCTCAGTCAGGAATTATGTCATAGTCTCAAAGTCTTCTCACTATC  150

seq1  TGAAGAAAAGCTGGATGCGTTCTGTGAAAGAGTTCTTTCTGTGCTTGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAAAGCTGGATGCGTTCTGTGAAAGAGTTCTTTCTGTGCTTGCAA  200

seq1  GTCACTCCGTTTGTAGCACTGGACATGCTGTATAGCCTTGTTCTGTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTCCGTTTGTAGCACTGGACATGCTGTATAGCCTTGTTCTGTGTCT  250

seq1  CTTCCCTTGGAGAGTGAGCCACTTGAAGACTGCACTGTTTTATGTTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTGGAGAGTGAGCCACTTGAAGACTGCACTGTTTTATGTTTTGC  300

seq1  ATCCAGCTCAGGGATGAAACATTTCTTCATTATTTTGTGGATTGTGTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCTCAGGGATGAAACATTTCTTCATTATTTTGTGGATTGTGTGGT  350

seq1  AAGTTCAGCTACAACTGAA  369
      |||||||||||||||||||
seq2  AAGTTCAGCTACAACTGAA  369


seq1: chr10_13924507_13925594
seq2: B6Ng01-270B15.g_63_1155

seq1  GAATTCTAAGAACATACCATGAGTTTTGGGCATGCAGACACACATCTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGAACATACCATGAGTTTTGGGCATGCAGACACACATCTGCA  50

seq1  ATCCTCGGCCTTGAGAAGTAGAGGCAGGAGGTTCAGGAGTTCAAGACTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCGGCCTTGAGAAGTAGAGGCAGGAGGTTCAGGAGTTCAAGACTAC  100

seq1  CCTCAGCTGCAATGTGATTCTGAGGCCAGCCTTGGCTACATGAGGTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCTGCAATGTGATTCTGAGGCCAGCCTTGGCTACATGAGGTCCTT  150

seq1  TCTTACAAAAAAGGGAATATGCAAAAATGAGGAAACATGGTGCTGAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACAAAAAAGGGAATATGCAAAAATGAGGAAACATGGTGCTGAAAAA  200

seq1  GTATATAGCAACATGCAAAAGGGTGGATAAAGACCCCTTCTTTATCTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATAGCAACATGCAAAAGGGTGGATAAAGACCCCTTCTTTATCTTAT  250

seq1  AATGTTTGCAGAGAGAGAGAGAGGCAGAGACAGACAGAGAGACAGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTGCAGAGAGAGAGAGAGGCAGAGACAGACAGAGAGACAGAGACA  300

seq1  GAGAGAGGCCTTTAAGAAGAAATGTGATCTAGATTAAGATCTGAAGAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGGCCTTTAAGAAGAAATGTGATCTAGATTAAGATCTGAAGAAGA  350

seq1  AATGAAATTTATAGGTGTTAAATTCAACCCATTGCCTCAGTCTACTGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATTTATAGGTGTTAAATTCAACCCATTGCCTCAGTCTACTGAGA  400

seq1  AATGCTTACATGTCAGTCTGACGTGTGTACGCTTTCATTTCATTTCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTACATGTCAGTCTGACGTGTGTACGCTTTCATTTCATTTCTCTT  450

seq1  TCTGAATTACAGAAATAATCATCTGAGTTGTAGACAAATGTCACCATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTACAGAAATAATCATCTGAGTTGTAGACAAATGTCACCATTTA  500

seq1  TGTGCACAACATGGCCAGGGACCAGTTTTGATTGTACTCCAGATCCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACAACATGGCCAGGGACCAGTTTTGATTGTACTCCAGATCCTCTC  550

seq1  ATGAACATTTCCAGATCCCTCTGGTGCCTTCCTTTAGTACACCCTTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATTTCCAGATCCCTCTGGTGCCTTCCTTTAGTACACCCTTTTAT  600

seq1  TTTGATATTTTACTTTAGGTGTCTGTGCTTTTTGTATGTGCATTAACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATATTTTACTTTAGGTGTCTGTGCTTTTTGTATGTGCATTAACATG  650

seq1  GGTGCATGTGTGTTACCACTCTATGTGCACACATGTGATGGCCAAGTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCATGTGTGTTACCACTCTATGTGCACACATGTGATGGCCAAGTGTC  700

seq1  AACCTCTGTTGTCTTCCTCAGATGCTTTCAACCTTTGTTTCATCTACTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTGTTGTCTTCCTCAGATGCTTTCAACCTTTGTTTCATCTACTAA  750

seq1  TTAAAATTATTCATTGACAATTTTACACACACACACACACACACACACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTATTCATTGACAATTTTACACACACACACACACACACACACAC  800

seq1  ACACACACACACACACACTGCATCCTGAGTACTCTCATTCTCCTCTGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACTGCATCCTGAGTACTCTCATTCTCCTCTGTAA  850

seq1  CCTGTCTCTGTGACCTTCTCTGTCCCCACAGAAGTTGGTACCAGGATTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCTGTGACCTTCTCTGTCCCCACAGAAGTTGGTACCAGGATTGG  900

seq1  TTCTAGAGGAACAGAAGTATAAGAATGAATCTTTTAAAAATACTGGGGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAGGAACAGAAGTATAAGAATGAATCTTTTAAAAATACTGGGGCT  950

seq1  ATTGATGCTGGTTAGCTGGAGCTAAGAAATTAGCGGTGATTAAGAAGAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGCTGGTTAGCTGGAGCTAAGAAATTAGCGGTGATTAAGAAGAGA  1000

seq1  CCACCATCATTGAGGTGACATC-TTCTGGGAAGTG-TTTTCTGAGAGCA-  1047
      ||||||||||||| |||||||| |||| ||  ||| ||||||||||||| 
seq2  CCACCATCATTGA-GTGACATCTTTCTTGG-TGTGTTTTTCTGAGAGCAC  1048

seq1  CAG-AGGCTGTGTTCCAGA--GATAG-CCAAGGTTGTACCTTGTG  1088
      ||| |||||||||||||||   |||| ||||| ||||||| ||||
seq2  CAGAAGGCTGTGTTCCAGAAGAATAGCCCAAGATTGTACCATGTG  1093


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