BAC Information

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BAC

Clone NameB6Ng01-273H10
Chromosome10 (Build37)
Map Location 21,505,973 - 21,641,969
singlet/doubletdoublet
Overlap geneLOC628133
Upstream geneLOC667202, Ahi1, Myb, LOC100039870, Hbs1l, Aldh8a1, LOC100039906, 1700020N01Rik, EG432436, LOC100039936
Downstream geneSgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1, Tcf21
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273H10.bB6Ng01-273H10.g
ACCGA075031GA075032
length1,177458
definitionB6Ng01-273H10.b B6Ng01-273H10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,505,973 - 21,507,148)(21,641,506 - 21,641,969)
sequence
gaattccaagcataattgagaaatgagttcaaaatcatcggtgaagacct
ggtgtttcttcgaccaataataacaataaggagcaaattgacgaagtaga
aagttatggcaggaaaaaatggattttttctgaaaaaaaaaaacaccctt
ttattgacattataggacagatttattagccactgttaaataaaatcaaa
tcttaaaaacacattagtaaaatactgttctaacaattttgttttttaag
attttattgttattattttaattatgtatatatgtatgtcttgagcatgg
gttatgcgatgcccacccaacaggattttgggtctccagaaactggagat
caggtggctgtgagctactgacattagtactaggaactgaacttggggcc
tccacaatagaagtatgtgttcctaaccactgagccatctctccagccct
aacaattctatccttttaataaagagcaaagtaacattatctgtaatcta
gcaactgctttgatttttcttggctgaatacttggatctcttctctattg
ttatgatataggagaaatatctgtctgtattacattgttttcatcttctc
tggagtcttcagttgcgggcagtatatcttgaaagcatgtgaaagacctg
ggagtatcatcactacaagacatctgtcaatcacctctccttctgcactg
accaagcatcatgtgagttagttactctgagggctacaatgacccgtgac
caccaggacttgaaattgcaatgccagaacagaacaaatgcataaaaact
agttatcaacagatcaatgtatcctagacacatccacacttaaatgacag
gtgatagaagtaatccaaagacaaggccccactccctgccctgcccccac
tctcagatccaagccacttgctgtctccagggagacaaacccgagcttgt
tcatgggaactgtactaaagagagctgtgtccggactctacagaggttag
gattctcttcttgtaaatctcccccttcacacgtctgacagtttgtccta
ccatagaagtaaaggacaattcagaatgatttcggcttgaagctccgtga
acttcttagggagaaccagttgacagccaccaatccatccgcagctgcca
agtgttagcctggtaagtacacgtgca
cccagctttcggtgcctttgggatttcccagtcccttcccatgcatcctg
ttctagattcccaaggtctaaccttgcatttctccaggcctggtctgggg
gatggctggtgagggcccaggaggaagagagtggaaagggagggagacat
gtctgtaccatcctccatgttggaactcacaggaagccccacccccagaa
tcagtgtgttgtgtgtgttacacaccacacaagtctcagccttgaactca
gtaatttaaagtccccttctgaccccactaaaataccacccactgatcgg
tgacaggcagagctcagggactcgttaatatgaggattttgaaatgaaga
taaagttcttattatttcttaaaattgtaggactgatcctttctttggaa
ttagcctgtcttgagcagaggaaatgaagaagaggaaggggggagaaggt
ggaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_21505973_21507148
seq2: B6Ng01-273H10.b_43_1219

seq1  GAATTCCAAGCATAATTGAGAAATGAGTTCAAAATCATCGGTGAAGACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCATAATTGAGAAATGAGTTCAAAATCATCGGTGAAGACCT  50

seq1  GGTGTTTCTTCGACCAATAATAACAATAAGGAGCAAATTGACGAAGTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTCTTCGACCAATAATAACAATAAGGAGCAAATTGACGAAGTAGA  100

seq1  AAGTTATGGCAGGAAAAAATGGATTTTTTCTGAAAAAAAAAAACACCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATGGCAGGAAAAAATGGATTTTTTCTGAAAAAAAAAAACACCCTT  150

seq1  TTATTGACATTATAGGACAGATTTATTAGCCACTGTTAAATAAAATCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGACATTATAGGACAGATTTATTAGCCACTGTTAAATAAAATCAAA  200

seq1  TCTTAAAAACACATTAGTAAAATACTGTTCTAACAATTTTGTTTTTTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAAACACATTAGTAAAATACTGTTCTAACAATTTTGTTTTTTAAG  250

seq1  ATTTTATTGTTATTATTTTAATTATGTATATATGTATGTCTTGAGCATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTGTTATTATTTTAATTATGTATATATGTATGTCTTGAGCATGG  300

seq1  GTTATGCGATGCCCACCCAACAGGATTTTGGGTCTCCAGAAACTGGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGCGATGCCCACCCAACAGGATTTTGGGTCTCCAGAAACTGGAGAT  350

seq1  CAGGTGGCTGTGAGCTACTGACATTAGTACTAGGAACTGAACTTGGGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGCTGTGAGCTACTGACATTAGTACTAGGAACTGAACTTGGGGCC  400

seq1  TCCACAATAGAAGTATGTGTTCCTAACCACTGAGCCATCTCTCCAGCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAATAGAAGTATGTGTTCCTAACCACTGAGCCATCTCTCCAGCCCT  450

seq1  AACAATTCTATCCTTTTAATAAAGAGCAAAGTAACATTATCTGTAATCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTCTATCCTTTTAATAAAGAGCAAAGTAACATTATCTGTAATCTA  500

seq1  GCAACTGCTTTGATTTTTCTTGGCTGAATACTTGGATCTCTTCTCTATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGCTTTGATTTTTCTTGGCTGAATACTTGGATCTCTTCTCTATTG  550

seq1  TTATGATATAGGAGAAATATCTGTCTGTATTACATTGTTTTCATCTTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATATAGGAGAAATATCTGTCTGTATTACATTGTTTTCATCTTCTC  600

seq1  TGGAGTCTTCAGTTGCGGGCAGTATATCTTGAAAGCATGTGAAAGACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCTTCAGTTGCGGGCAGTATATCTTGAAAGCATGTGAAAGACCTG  650

seq1  GGAGTATCATCACTACAAGACATCTGTCAATCACCTCTCCTTCTGCACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTATCATCACTACAAGACATCTGTCAATCACCTCTCCTTCTGCACTG  700

seq1  ACCAAGCATCATGTGAGTTAGTTACTCTGAGGGCTACAATGACCCGTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGCATCATGTGAGTTAGTTACTCTGAGGGCTACAATGACCCGTGAC  750

seq1  CACCAGGACTTGAAATTGCAATGCCAGAACAGAACAAATGCATAAAAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGACTTGAAATTGCAATGCCAGAACAGAACAAATGCATAAAAACT  800

seq1  AGTTATCAACAGATCAATGTATCCTAGACACATCCACACTTAAATGACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCAACAGATCAATGTATCCTAGACACATCCACACTTAAATGACAG  850

seq1  GTGATAGAAGTAATCCAAAGACAAGGCCCCACTCCCTGCCCTGCCCCCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAGAAGTAATCCAAAGACAAGGCCCCACTCCCTGCCCTGCCCCCAC  900

seq1  TCTCAGATCCAAGCCACTTGCTGTCTCCAGGGAGACAAA-CCGAGC-TGT  948
      ||||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  TCTCAGATCCAAGCCACTTGCTGTCTCCAGGGAGACAAACCCGAGCTTGT  950

seq1  CCAT-GGAACTGTACTAAAGAGAGCTGTGT-CGGACTCTACAGAGGTTAG  996
       ||| ||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCATGGGAACTGTACTAAAGAGAGCTGTGTCCGGACTCTACAGAGGTTAG  1000

seq1  GATTCTCTTCTTGTAAATCT-CCCCTTCACACGTCTGACAGTTTGTCCTA  1045
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GATTCTCTTCTTGTAAATCTCCCCCTTCACACGTCTGACAGTTTGTCCTA  1050

seq1  CCATAG-AGTAAAGGACAAATTTCAGGAAATGATATAGGCTTGAAGCCCC  1094
      |||||| ||||||||||||  |||||  |||||| | |||||||||| ||
seq2  CCATAGAAGTAAAGGACAA--TTCAG--AATGATTTCGGCTTGAAGCTCC  1096

seq1  GTGGAAACTCTTTAGGAGAAACCAG-TGACAGCCACCACATCACAACGGC  1143
      |||  ||||  |||||   |||||| |||||||||||| ||| || | ||
seq2  GTG--AACTTCTTAGGGAGAACCAGTTGACAGCCACCA-ATC-CATCCGC  1142

seq1  AGCTGCAAAGTGTTAGCCTGGT-AGTACA-GTGCA  1176
      |||||| ||||||||||||||| |||||| |||||
seq2  AGCTGCCAAGTGTTAGCCTGGTAAGTACACGTGCA  1177

seq1: chr10_21641506_21641969
seq2: B6Ng01-273H10.g_63_526 (reverse)

seq1  CCTCCTCCACCTTCTCCCCCCTTCCTCTTCTTCATTTCCTCTGCTCAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCACCTTCTCCCCCCTTCCTCTTCTTCATTTCCTCTGCTCAAGA  50

seq1  CAGGCTAATTCCAAAGAAAGGATCAGTCCTACAATTTTAAGAAATAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTAATTCCAAAGAAAGGATCAGTCCTACAATTTTAAGAAATAATAA  100

seq1  GAACTTTATCTTCATTTCAAAATCCTCATATTAACGAGTCCCTGAGCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTATCTTCATTTCAAAATCCTCATATTAACGAGTCCCTGAGCTCT  150

seq1  GCCTGTCACCGATCAGTGGGTGGTATTTTAGTGGGGTCAGAAGGGGACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCACCGATCAGTGGGTGGTATTTTAGTGGGGTCAGAAGGGGACTT  200

seq1  TAAATTACTGAGTTCAAGGCTGAGACTTGTGTGGTGTGTAACACACACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTACTGAGTTCAAGGCTGAGACTTGTGTGGTGTGTAACACACACAA  250

seq1  CACACTGATTCTGGGGGTGGGGCTTCCTGTGAGTTCCAACATGGAGGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGATTCTGGGGGTGGGGCTTCCTGTGAGTTCCAACATGGAGGATG  300

seq1  GTACAGACATGTCTCCCTCCCTTTCCACTCTCTTCCTCCTGGGCCCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGACATGTCTCCCTCCCTTTCCACTCTCTTCCTCCTGGGCCCTCAC  350

seq1  CAGCCATCCCCCAGACCAGGCCTGGAGAAATGCAAGGTTAGACCTTGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATCCCCCAGACCAGGCCTGGAGAAATGCAAGGTTAGACCTTGGGA  400

seq1  ATCTAGAACAGGATGCATGGGAAGGGACTGGGAAATCCCAAAGGCACCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAACAGGATGCATGGGAAGGGACTGGGAAATCCCAAAGGCACCGA  450

seq1  AAGCTGGGGAATTC  464
      ||||||||||||||
seq2  AAGCTGGGGAATTC  464