MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-273J01
Chromosome	10 (Build37)
Map Location	83,196,800 - 83,346,097
singlet/doublet	doublet
Overlap gene	1500009L16Rik
Upstream gene	Hcfc2, Nfyb, 1700028I16Rik, Txnrd1, Eid3, EG216185, Chst11, Slc41a2, D10Wsu102e, LOC666748, Aldh1l2, A230046K03Rik, Appl2
Downstream gene	LOC100041225, C230099D08Rik, LOC432482, Nuak1, Ckap4, Tcp11l2, Polr3b, Rfx4, EG625690
Link	Open Mouse BAC browser

Click to get alignment info.

name	Hcfc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67933 MGI:1915183
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nfyb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18045 MGI:97317
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700028I16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70003 MGI:1917253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Txnrd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50493 MGI:1354175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	Eid3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66341 MGI:1913591
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG216185 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216185 MGI:3648850
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 41 ESTs, 7 Proteins

name	Chst11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58250 MGI:1927166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc41a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:338365 MGI:2442940
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D10Wsu102e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28109 MGI:106381
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666748 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666748
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Aldh1l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216188 MGI:2444680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A230046K03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319277 MGI:2441787
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Appl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216190 MGI:2384914
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1500009L16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69784 MGI:1917034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs

name	LOC100041225 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041225
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	C230099D08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320212 MGI:2443595
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC432482 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:432482
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs, 17 Proteins pseudo : _no_value

name	Nuak1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77976 MGI:1925226
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ckap4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216197 MGI:2444926
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcp11l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216198 MGI:2444679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Polr3b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70428 MGI:1917678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rfx4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71137 MGI:1918387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG625690 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625690 MGI:3643042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins

name	Hcfc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487040 GeneID:67933 MGI:1915183
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : host cell factor C2 transcript_id : NM_001081218.1

name	Nfyb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909330 GeneID:18045 MGI:97317
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear transcription factor-Y beta transcript_id : NM_010914.2

name	1700028I16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260967 GeneID:70003 MGI:1917253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : RIKEN cDNA 1700028I16 gene transcript_id : XM_001475840.1

name	Txnrd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110224446 GeneID:50493 MGI:1354175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin reductase 1 transcript_id : NM_001042523.1

name	Txnrd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110224441 GeneID:50493 MGI:1354175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin reductase 1 transcript_id : NM_001042513.1

name	Txnrd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110224443 GeneID:50493 MGI:1354175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin reductase 1 transcript_id : NM_015762.2

name	Txnrd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110224444 GeneID:50493 MGI:1354175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin reductase 1 transcript_id : NM_001042514.1

name	Eid3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125988413 GeneID:66341 MGI:1913591
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EP300 interacting inhibitor of differentiation 3 transcript_id : NM_025499.2

name	EG216185 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260969 GeneID:216185 MGI:3648850
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 41 ESTs, 7 Proteins product : predicted gene, EG216185 transcript_id : XM_122081.6

name	Chst11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76559941 GeneID:58250 MGI:1927166
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbohydrate sulfotransferase 11 transcript_id : NM_021439.2

name	Slc41a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349904 GeneID:338365 MGI:2442940
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 41, member 2 transcript_id : NM_177388.3

name	D10Wsu102e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46195802 GeneID:28109 MGI:106381
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 10, Wayne State University 102, expressed transcript_id : NM_026579.2

name	Aldh1l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956315 GeneID:216188 MGI:2444680
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldehyde dehydrogenase 1 family, member L2 transcript_id : NM_153543.1

name	A230046K03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126090571 GeneID:319277 MGI:2441787
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A230046K03 gene transcript_id : NM_001033375.2

name	Appl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803546 GeneID:216190 MGI:2384914
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 transcript_id : NM_145220.2

name	1500009L16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388505 GeneID:69784 MGI:1917034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs product : RIKEN cDNA 1500009L16 gene transcript_id : XM_899407.2

name	C230099D08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260972 GeneID:320212 MGI:2443595
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA C230099D08 gene transcript_id : XM_001476017.1

name	Nuak1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52138543 GeneID:77976 MGI:1925226
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NUAK family, SNF1-like kinase, 1 transcript_id : NM_001004363.1

name	Ckap4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62526117 GeneID:216197 MGI:2444926
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytoskeleton-associated protein 4 transcript_id : NM_175451.1

name	Tcp11l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130244 GeneID:216198 MGI:2444679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : t-complex 11 (mouse) like 2 transcript_id : NM_146008.2

name	Polr3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46195738 GeneID:70428 MGI:1917678
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (RNA) III (DNA directed) polypeptide B transcript_id : NM_027423.1

name	Rfx4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67906190 GeneID:71137 MGI:1918387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulatory factor X, 4 (influences HLA class II expression) transcript_id : NM_001024918.1

name	EG625690 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261075 GeneID:625690 MGI:3643042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins product : predicted gene, EG625690 transcript_id : XM_894484.3

name	Rfx4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892183 GeneID:71137 MGI:1918387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulatory factor X, 4 (influences HLA class II expression) transcript_id : NM_027689.3

name	Hcfc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487041 GeneID:67933 MGI:1915183
definition	codon_start : 1 product : host cell factor 2 protein_id : NP_001074687.1

name	Nfyb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754850 GeneID:18045 MGI:97317
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS]; GO:0005667 - transcription factor complex [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : nuclear transcription factor-Y beta protein_id : NP_035044.1

name	1700028I16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260968 GeneID:70003 MGI:1917253
definition	codon_start : 1 product : hypothetical protein LOC70003 protein_id : XP_001475890.1

name	Eid3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125988414 GeneID:66341 MGI:1913591
definition	codon_start : 1 product : E1A-like inhibitor of differentiation 3 protein_id : NP_079775.2

name	Txnrd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110224447 GeneID:50493 MGI:1354175
definition	EC_number : 1.8.1.9 GO_component : GO:0005829 - cytosol [Evidence IDA] GO_function : GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016654 - oxidoreductase activity, acting on NADH or NADPH, disulfide as acceptor [Evidence IEA]; GO:0008430 - selenium binding [Evidence IEA]; GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IDA] GO_process : GO:0008283 - cell proliferation [Evidence IMP]; GO:0006118 - electron transport [Evidence IEA]; GO:0006125 - thioredoxin pathway [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; TR alpha product : thioredoxin reductase 1 isoform 1 protein_id : NP_001035988.1 transl_except : (pos:82358782..82358784,aa:Sec)

name	Txnrd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110224442 GeneID:50493 MGI:1354175
definition	EC_number : 1.8.1.9 GO_component : GO:0005829 - cytosol [Evidence IDA] GO_function : GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016654 - oxidoreductase activity, acting on NADH or NADPH, disulfide as acceptor [Evidence IEA]; GO:0008430 - selenium binding [Evidence IEA]; GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IDA] GO_process : GO:0008283 - cell proliferation [Evidence IMP]; GO:0006118 - electron transport [Evidence IEA]; GO:0006125 - thioredoxin pathway [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; TR alpha product : thioredoxin reductase 1 isoform 2 protein_id : NP_001035978.1 transl_except : (pos:82358782..82358784,aa:Sec)

name	Txnrd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110224445 GeneID:50493 MGI:1354175
definition	EC_number : 1.8.1.9 GO_component : GO:0005829 - cytosol [Evidence IDA] GO_function : GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016654 - oxidoreductase activity, acting on NADH or NADPH, disulfide as acceptor [Evidence IEA]; GO:0008430 - selenium binding [Evidence IEA]; GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IDA] GO_process : GO:0008283 - cell proliferation [Evidence IMP]; GO:0006118 - electron transport [Evidence IEA]; GO:0006125 - thioredoxin pathway [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 4; TR alpha product : thioredoxin reductase 1 isoform 2 protein_id : NP_001035979.1 transl_except : (pos:82358782..82358784,aa:Sec)

name	Txnrd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13569841 CCDS:CCDS24072.1 GeneID:50493 MGI:1354175
definition	EC_number : 1.8.1.9 GO_component : GO:0005829 - cytosol [Evidence IDA] GO_function : GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016654 - oxidoreductase activity, acting on NADH or NADPH, disulfide as acceptor [Evidence IEA]; GO:0008430 - selenium binding [Evidence IEA]; GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IDA] GO_process : GO:0008283 - cell proliferation [Evidence IMP]; GO:0006118 - electron transport [Evidence IEA]; GO:0006125 - thioredoxin pathway [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 3; TR alpha product : thioredoxin reductase 1 isoform 2 protein_id : NP_056577.2 transl_except : (pos:82358782..82358784,aa:Sec)

name	EG216185 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260970 GeneID:216185 MGI:3648850
definition	codon_start : 1 product : similar to TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor protein_id : XP_122081.4

name	Chst11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76559942 CCDS:CCDS24074.1 GeneID:58250 MGI:1927166
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0047756 - chondroitin 4-sulfotransferase activity [Evidence IEA]; GO:0008146 - sulfotransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0030206 - chondroitin sulfate biosynthesis [Evidence IDA] codon_start : 1 note : chondroitin 4-sulfotransferase product : carbohydrate sulfotransferase 11 protein_id : NP_067414.2

name	Slc41a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893565 CCDS:CCDS24075.1 GeneID:338365 MGI:2442940
definition	codon_start : 1 product : solute carrier family 41, member 2 protein_id : NP_796362.1

name	D10Wsu102e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:44662811 CCDS:CCDS24076.1 GeneID:28109 MGI:106381
definition	codon_start : 1 product : hypothetical protein LOC28109 protein_id : NP_080855.1

name	Aldh1l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956316 CCDS:CCDS24077.1 GeneID:216188 MGI:2444680
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0048037 - cofactor binding [Evidence IEA]; GO:0016155 - formyltetrahydrofolate dehydrogenase activity [Evidence IEA]; GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0009258 - 10-formyltetrahydrofolate catabolism [Evidence IEA]; GO:0009058 - biosynthesis [Evidence IEA]; GO:0006730 - one-carbon compound metabolism [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : aldehyde dehydrogenase 1 family, member L2 protein_id : NP_705771.1

name	A230046K03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126090572 GeneID:319277 MGI:2441787
definition	codon_start : 1 product : hypothetical protein LOC319277 protein_id : NP_001028547.2

name	Appl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21644587 CCDS:CCDS24078.1 GeneID:216190 MGI:2384914
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0010008 - endosome membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS]; GO:0016581 - NuRD complex [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0017137 - Rab GTPase binding [Evidence ISS] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0008283 - cell proliferation [Evidence ISS]; GO:0007165 - signal transduction [Evidence ISS] codon_start : 1 note : DIP13 beta product : Dip3 beta protein_id : NP_660255.1

name	1500009L16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83027529 GeneID:69784 MGI:1917034
definition	codon_start : 1 product : hypothetical protein LOC69784 protein_id : XP_904500.1

name	C230099D08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260973 GeneID:320212 MGI:2443595
definition	codon_start : 1 product : hypothetical protein LOC320212 protein_id : XP_001476067.1

name	Nuak1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138544 CCDS:CCDS24079.1 GeneID:77976 MGI:1925226
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : ZNUAK family, SNF1-like kinase, 1 protein_id : NP_001004363.1

name	Ckap4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62526118 CCDS:CCDS24080.1 GeneID:216197 MGI:2444926
definition	GO_component : GO:0009986 - cell surface [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS] [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : cytoskeleton-associated protein 4 protein_id : NP_780660.1

name	Tcp11l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122471 GeneID:216198 MGI:2444679
definition	codon_start : 1 product : t-complex 11 (mouse) like 2 protein_id : NP_666120.1

name	Polr3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46195739 CCDS:CCDS24081.1 GeneID:70428 MGI:1917678
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : RNA polymerase III subunit RPC2 homolog product : RNA polymerase III subunit RPC2 protein_id : NP_081699.1

name	Rfx4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67906191 CCDS:CCDS24082.1 GeneID:71137 MGI:1918387
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; winged-helix transcription factor RFX4 product : regulatory factor X, 4 isoform 1 protein_id : NP_001020089.1

name	EG625690 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261076 GeneID:625690 MGI:3643042
definition	codon_start : 1 product : similar to Ac2-210 protein_id : XP_899577.2

name	Rfx4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67906189 CCDS:CCDS24083.1 GeneID:71137 MGI:1918387
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; winged-helix transcription factor RFX4 product : regulatory factor X, 4 isoform 2 protein_id : NP_081965.2

name	LOC666748 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666748
definition	number : 1 pseudo : _no_value

name	LOC100041225 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041225
definition	number : 1 pseudo : _no_value

name	LOC432482 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261069 GeneID:432482
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs, 17 Proteins product : similar to nucleoside diphosphate kinase B pseudo : _no_value transcript_id : XR_034427.1

clone name	MSMg01-542P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169L13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-412I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494A18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-460K24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-179O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100A14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-273J01.b	B6Ng01-273J01.g
ACC	GA075106	GA075107
length	1,054	759
definition	B6Ng01-273J01.b	B6Ng01-273J01.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(83,345,048 - 83,346,097)	(83,196,800 - 83,197,556)
sequence	gaattctcaaggaattcagccattttccaagtctctctgccagtacatgg caaagtcgggatgccaagctcaagacaccccctcccccatctcagagtga atgccctcactgatgtgttacccttgccaagggagtcagggagcacatct atgagacaatgtcctccctggccttctccaagaatctgcaggcttccatc agctgtttctgtaaggaaggcaggacaagcagagagcaaatagcagaatg ctttgggttctaaaagtcaaatttctgccattcctgctttgggggtttgt gaaatccctggtgacctgtagcagatcccatgcattccaggagcgtgtaa tgaaaacaacctggtctccccaagtgactggaaaagagtgcagtggctgg ctctctcaaagtcaagagttgtgttatttctcagctccttgcagagagtc aagtcaggctgcctcccccagacgaaatgaggggccaccatggcgggcgc ccttcctttggcccagattcccatcctacaagcctccatgtgagaggccc ttgggaatggcttgttgtttggaatttaaacatccccacttcacctagac acagagaactattttttaggtatgccaagaattaaccagcgaggacgtcc gtttaattgtatgtgaaacagaagctaatagtatcagcaggctggccgcc ttcaccgatagcgtgaggcaagaagggctgtcagaaagtgatcaatggac gggctttgagcagacctacctggggtaaaagcactcatgtggccattgtt tcctacattcatcccttataggcaagaaacctaactttctgtctgcgttc actgtgtgagaggaacatctttgatctctcagatctgcaagaatcccaaa gggaagcaagcggtgggtttgattattatctttaaagtctagaattcctt aggtgagatttgggtatgaaattcatccaccgcagtgggggggaggtggg cgactgtgtccacgtctgggcctcatacgcgcagattattttcactaagg cagt	gaattctcttggctcatgtatgcaacctctcacattaaccagtgtgtgaa tttgaacaattctaagaacgttctgggcagcctgactcattcttcatact cactctgtatggaggagcatctgcctatgggatgcttccttctaagcatg gaagctaccgggataaggtggtgtcttgcatctaattggcttggtgggtt tgtttgtgttcttagaaatgtgagacatgtcagggagaatgtattcttcc caaatatgaattttactgtgtgtggctgtttgaatatacttgacccacag ggcgtggtacttttaggaggtgtggccttgttggagaaagtgtgtcactg tgggtgtgggctttgaagctccacccagtgaggaagactcagtttctcct ggctgcagttagatcaaagtgtagaactgtaaggtcctcctgcaccatgc ctgcctggatgctgccatgctccttccttgatgataatggactgaacctc tgaacctataagctagccccagttaattgttgtccttataagagttgcct tggtcacggtgcctgttcacagcagtaaaaccctaacttaggcatcatga gtttctttttaaaagtgaagcaattaatcaactaattaatttagtggtgg tggtaattgaaccaggccctcgtttatgccaggcaagtgatctaacacaa agccatgaaacctcaaccagtagaattttaaaaacttttgaacagcaccc gtgtgtgtg
quality values	Open. Hide. 58 26 33 28 58 54 54 34 27 36 52 62 47 38 38 62 38 37 41 62 47 37 62 62 62 62 62 37 26 47 62 32 30 22 21 21 21 21 28 37 43 36 59 59 62 62 59 62 62 62 46 59 59 62 59 62 62 59 62 62 59 59 62 62 59 59 62 56 59 62 59 59 59 59 59 62 62 62 62 59 48 33 33 56 50 62 62 62 59 62 62 62 62 62 51 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 54 59 62 62 62 62 62 59 54 62 62 59 62 59 62 62 59 62 62 62 54 46 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 56 59 62 62 62 62 59 62 62 62 56 62 62 62 62 56 56 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 27 62 56 62 62 56 56 56 56 62 62 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 56 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 52 48 54 54 58 54 54 54 43 54 54 58 58 58 58 42 52 54 58 58 54 54 54 52 54 58 58 58 58 54 58 41 45 39 58 58 58 58 58 58 41 49 45 41 58 58 58 58 54 58 52 58 58 42 52 54 58 43 58 47 46 58 58 54 58 58 58 52 58 58 58 58 58 52 58 58 58 53 46 46 58 58 52 50 58 51 52 58 51 50 58 42 58 48 50 54 50 58 58 58 58 58 58 52 47 49 46 46 58 54 51 54 30 50 50 58 28 35 58 53 54 48 49 34 46 54 58 51 51 58 36 39 51 58 51 54 50 51 54 39 37 42 48 58 58 40 53 53 53 41 49 58 58 48 58 50 52 58 58 32 58 51 53 42 53 53 53 53 53 49 53 32 26 49 40 33 58 38 50 49 44 41 58 40 40 49 51 51 50 30 52 54 40 51 52 50 37 51 52 42 50 41 32 44 23 51 24 35 54 35 19 49 38 32 49 51 42 53 37 26 54 54 52 32 41 52 31 38 52 37 25 37 54 44 33 40 26 54 49 39 53 54 45 45 53 32 53 39 25 31 20 53 40 39 51 40 31 30 54 54 49 37 53 54 54 51 29 45 34 45 52 42 31 34 53 31 32 44 24 40 26 45 39 53 31 52 31 32 45 35 34 45 23 28 53 41 24 52 32 53 53 31 35 37 36 32 26 46 30 24 46 31 42 51 51 15 34 31 30 33 30 38 51 46 31 36 31 31 43 28 31 39 28 33 31 23 24 36 31 51 31 42 32 30 31 18 38 16 16 30 33 32 32 38 42 31 48 35 31 31 33 31 38 43 34 30 20 11 37 25 36 32 36 28 15 28 31 30 34 36 41 44 43 24 39 37 30 47 30 18 31 21 31 22 19 31 25 11 30 12 16 32 15 39 46 31 14 30 20 32 32 26 30 31 32 38 28 48 37 36 44 31 21 21 30 22 42 23 25 25 16 30 30 17 13 14 8 12 15 24 26 37 24 29 15 38 29 9 43 18 17 31 32 32 30 40 33 9 20 29 24 31 34 22 24 31 7 9 32 18 10 7 8 39 31 34 37 31 6 22 9 33 16 26 39 24 17 9 23 27 28 37 25 22 31 37 21 11 25 16 22 14 15 28 47 20 27 10 20 19 6 13 3 3 5 7 15 13 9 12 19 13 7 6 6 34 28 24 7 12 19 6 14 9 17 16 13 24 12 9	Open. Hide. 62 49 51 47 62 62 62 62 62 62 62 44 56 59 59 32 56 62 59 62 59 62 62 51 62 62 62 62 62 54 54 62 62 59 62 59 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 59 59 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 52 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 54 47 54 58 58 54 58 54 58 58 54 58 54 58 58 58 58 54 54 58 54 58 54 58 54 58 58 54 54 58 58 58 58 58 58 52 49 54 54 58 54 58 41 47 54 58 54 58 54 37 58 52 58 58 54 51 58 58 58 58 48 44 58 58 58 58 58 58 58 58 45 34 49 50 53 58 58 52 58 58 58 54 58 58 51 51 51 58 58 58 51 36 58 58 50 50 58 58 58 58 52 58 51 58 51 58 52 58 42 49 51 58 58 51 31 29 51 53 39 58 58 58 58 52 41 41 58 54 40 58 53 52 58 54 42 51 50 33 51 58 58 50 44 42 37 16 44 39 44 51 38 47 51 54 54 30 35 52 37 49 47 34 50 49 35 33 51 41 53 51 28 35 49 40 24 34 49 32 46 49 49 41 37 34 41 32 53 53 51 35 31 39 35 42 39 38 40 44 46 36 45 45 51 26 22 9 18 54 54 18 29 54 54 54 42 22 25 54 49 49 29 52 51 45 32 22 35 30 14 45 28 31 33 47 19 27 32 40 27 11

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_83345048_83346097
seq2: B6Ng01-273J01.b_49_1102 (reverse)

seq1  ACTGCC-TAGTGAAAAT-ATCTGCGCCTTAATGAGGCCCAGACGTGGACA  48
      |||||| |||||||||| |||||||| |  ||||||||||||||||||||
seq2  ACTGCCTTAGTGAAAATAATCTGCGCGT--ATGAGGCCCAGACGTGGACA  48

seq1  CAGTCGCCCACCT--CCCCCACTGC-GTGGATGAATTTCATA-CCAAATC  94
      |||||||||||||  |||||||||| |||||||||||||||| |||||||
seq2  CAGTCGCCCACCTCCCCCCCACTGCGGTGGATGAATTTCATACCCAAATC  98

seq1  TCACCTAAGGAATTCTAGACTTTAAAGATAATAATCAAAACCACCGCTTG  144
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCACCTAAGGAATTCTAGACTTTAAAGATAATAATCAAACCCACCGCTTG  148

seq1  CTTCCCTTTGGGATTCTTGCAGATCTGAGAGATCAAAGATGTTCCTCTCA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTTGGGATTCTTGCAGATCTGAGAGATCAAAGATGTTCCTCTCA  198

seq1  CACAGTGAACGCAGACAGAAAGTTAGGTTTCTTGCCTATAAGGGATGAAT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGAACGCAGACAGAAAGTTAGGTTTCTTGCCTATAAGGGATGAAT  248

seq1  GTAGGAAACAATGGCCACATGAGTGCTTTTACCCCAGGTAGGTCTGCTCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAAACAATGGCCACATGAGTGCTTTTACCCCAGGTAGGTCTGCTCA  298

seq1  AAGCCCGTCCATTGATCACTTTCTGACAGCCCTTCTTGCCTCACGCTATC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCGTCCATTGATCACTTTCTGACAGCCCTTCTTGCCTCACGCTATC  348

seq1  GGTGAAGGCGGCCAGCCTGCTGATACTATTAGCTTCTGTTTCACATACAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGGCGGCCAGCCTGCTGATACTATTAGCTTCTGTTTCACATACAA  398

seq1  TTAAACGGACGTCCTCGCTGGTTAATTCTTGGCATACCTAAAAAATAGTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACGGACGTCCTCGCTGGTTAATTCTTGGCATACCTAAAAAATAGTT  448

seq1  CTCTGTGTCTAGGTGAAGTGGGGATGTTTAAATTCCAAACAACAAGCCAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTCTAGGTGAAGTGGGGATGTTTAAATTCCAAACAACAAGCCAT  498

seq1  TCCCAAGGGCCTCTCACATGGAGGCTTGTAGGATGGGAATCTGGGCCAAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGGGCCTCTCACATGGAGGCTTGTAGGATGGGAATCTGGGCCAAA  548

seq1  GGAAGGGCGCCCGCCATGGTGGCCCCTCATTTCGTCTGGGGGAGGCAGCC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGCGCCCGCCATGGTGGCCCCTCATTTCGTCTGGGGGAGGCAGCC  598

seq1  TGACTTGACTCTCTGCAAGGAGCTGAGAAATAACACAACTCTTGACTTTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGACTCTCTGCAAGGAGCTGAGAAATAACACAACTCTTGACTTTG  648

seq1  AGAGAGCCAGCCACTGCACTCTTTTCCAGTCACTTGGGGAGACCAGGTTG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCCAGCCACTGCACTCTTTTCCAGTCACTTGGGGAGACCAGGTTG  698

seq1  TTTTCATTACACGCTCCTGGAATGCATGGGATCTGCTACAGGTCACCAGG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTACACGCTCCTGGAATGCATGGGATCTGCTACAGGTCACCAGG  748

seq1  GATTTCACAAACCCCCAAAGCAGGAATGGCAGAAATTTGACTTTTAGAAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCACAAACCCCCAAAGCAGGAATGGCAGAAATTTGACTTTTAGAAC  798

seq1  CCAAAGCATTCTGCTATTTGCTCTCTGCTTGTCCTGCCTTCCTTACAGAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCATTCTGCTATTTGCTCTCTGCTTGTCCTGCCTTCCTTACAGAA  848

seq1  ACAGCTGATGGAAGCCTGCAGATTCTTGGAGAAGGCCAGGGAGGACATTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGATGGAAGCCTGCAGATTCTTGGAGAAGGCCAGGGAGGACATTG  898

seq1  TCTCATAGATGTGCTCCCTGACTCCCTTGGCAAGGGTAACACATCAGTGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATAGATGTGCTCCCTGACTCCCTTGGCAAGGGTAACACATCAGTGA  948

seq1  GGGCATTCACTCTGAGATGGGGGAGGGGGTGTCTTGAGCTTGGCATCCCG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATTCACTCTGAGATGGGGGAGGGGGTGTCTTGAGCTTGGCATCCCG  998

seq1  ACTTTGCCATGTACTGGCAGAGAGACTTGGAAAATGGCTGAATTCCTTGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGCCATGTACTGGCAGAGAGACTTGGAAAATGGCTGAATTCCTTGA  1048

seq1  GAATTC  1050
      ||||||
seq2  GAATTC  1054

seq1: chr10_83196800_83197556
seq2: B6Ng01-273J01.g_70_828

seq1  GAATTCTCTTGGCTCATGTATGCAACCTCTCACATTAACCAGTGTGTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGGCTCATGTATGCAACCTCTCACATTAACCAGTGTGTGAA  50

seq1  TTTGAACAATTCTAAGAACGTTCTGGGCAGCCTGACTCATTCTTCATACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACAATTCTAAGAACGTTCTGGGCAGCCTGACTCATTCTTCATACT  100

seq1  CACTCTGTATGGAGGAGCATCTGCCTATGGGATGCTTCCTTCTAAGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGTATGGAGGAGCATCTGCCTATGGGATGCTTCCTTCTAAGCATG  150

seq1  GAAGCTACCGGGATAAGGTGGTGTCTTGCATCTAATTGGCTTGGTGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTACCGGGATAAGGTGGTGTCTTGCATCTAATTGGCTTGGTGGGTT  200

seq1  TGTTTGTGTTCTTAGAAATGTGAGACATGTCAGGGAGAATGTATTCTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGTTCTTAGAAATGTGAGACATGTCAGGGAGAATGTATTCTTCC  250

seq1  CAAATATGAATTTTACTGTGTGTGGCTGTTTGAATATACTTGACCCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATGAATTTTACTGTGTGTGGCTGTTTGAATATACTTGACCCACAG  300

seq1  GGCGTGGTACTTTTAGGAGGTGTGGCCTTGTTGGAGAAAGTGTGTCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGGTACTTTTAGGAGGTGTGGCCTTGTTGGAGAAAGTGTGTCACTG  350

seq1  TGGGTGTGGGCTTTGAAGCTCCACCCAGTGAGGAAGACTCAGTTTCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTGGGCTTTGAAGCTCCACCCAGTGAGGAAGACTCAGTTTCTCCT  400

seq1  GGCTGCAGTTAGATCAAAGTGTAGAACTGTAAGGTCCTCCTGCACCATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAGTTAGATCAAAGTGTAGAACTGTAAGGTCCTCCTGCACCATGC  450

seq1  CTGCCTGGATGCTGCCATGCTCCTTCCTTGATGATAATGGACTGAACCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGGATGCTGCCATGCTCCTTCCTTGATGATAATGGACTGAACCTC  500

seq1  TGAACCTATAAGCTAGCCCCAGTTAATTGTTGTCCTTATAAGAGTTGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTATAAGCTAGCCCCAGTTAATTGTTGTCCTTATAAGAGTTGCCT  550

seq1  TGGTCACGGTGCCTGTTCACAGCAGTAAAACCCTAACTTAGGCATCATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACGGTGCCTGTTCACAGCAGTAAAACCCTAACTTAGGCATCATGA  600

seq1  GTTTCTTTTTAAAAGTGAAGCAATTAATCAACTAATTAATTTAGTGGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTTTAAAAGTGAAGCAATTAATCAACTAATTAATTTAGTGGTGG  650

seq1  TGGTAATTGAACCAGGCCCTCGTTTATGCCAGGCAAGTGATCTAACACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATTGAACCAGGCCCTCGTTTATGCCAGGCAAGTGATCTAACACAA  700

seq1  AGCCATGAAACCTCAACCAGTAGAA-TTTAAAAACTTTTGAACAGCA-CC  748
      ||||||||||||||||||||||||| ||||||||||||||||||||| ||
seq2  AGCCATGAAACCTCAACCAGTAGAATTTTAAAAACTTTTGAACAGCACCC  750

seq1  GTGTGTGTG  757
      |||||||||
seq2  GTGTGTGTG  759

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information