BAC Information

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BAC

Clone NameB6Ng01-275I14
Chromosome10 (Build37)
Map Location 46,980,223 - 46,981,374
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041632
Downstream geneLOC668252, LOC100042387, LOC100041663, LOC100042398
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275I14.bB6Ng01-275I14.g
ACCGA076549GA076550
length1,2101,116
definitionB6Ng01-275I14.b B6Ng01-275I14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctccagtcacataaccaaccgcaaagaacaccaaatgcacaaaa
caaagaaggaatattaaaagcagtcagggaaaaatgtcaagtaacatata
aaggcaggcctaccagaataataccagacttctcaccagagactataaaa
gccagaagatcctgggcagatatcatacagaccctaagagaatataaaag
ctagcccaggctactatacccagcaaaactcccaattactatagattgag
aaagcaagatattccatgacaaaaccaaatttatacattatcttcacaca
aatccagcacaaccaaggataaaatacagaaaactccaatacaaggaagg
aaactacaccctagaaaaatcaagaaaataatgttcttttaacaaaccaa
aaagaagatagccacataaatataattccacatcaacaaaaataacaaga
agcaacaattatttttcgttaatatctcttaatataaatggactcctcaa
ttcccaagtaaaaagatatacactaacagactggatatgtaaacaggacc
caactttttcctacattcaggaaacatacctcagtgacaaaaacatatac
tacctcagagtaaagactgggaaaaaatttccaatcaaatgatctcaata
aacaagctggagtagccattctaatatagaataaaatcaacttcaaccaa
aagatatcaaaaaagataacgacactttacactcatcaattgaaaaatat
agcaagatttattctcaattctgagcatctatgctccaagtacaagggca
cccacattcataagagaaactttactaaagctcaaagcacacactgcata
tcacacaacaatgctgggagatttcaataccccattctcatcaatggaca
gattaaaggaaatagaaactaagagagatacagtgaaaacagcagaagtt
atgggaacaaatgaatttaacagatatctaaaggaatatttcatcattta
aacaaaaagaatatacggtcttctcagcactcatggcacttcctcaaact
gatgataatatcgaacacaaacagcatcatagaatacatgagacagaaat
atcttgcatcctatcagatacattgactaagctgtcttccattacacgaa
aggaaaaaatgaagacccacacagtttgcaaccttaaacacaattggtcc
ctctacctct
gaattcagttattgaagctggaaatttctttgtgctactagccccttttt
ctacattttccatcattttagagtaaatttttattttttatttatataga
gtttatattactgttgcctctgttccatcatacttaatgaaccatgattc
ttgctgttaaaaattaactatttttattattattgattcattacttatag
atcatcagtaaattttgatgaagttaaaagtgttgcatcattattttaca
tttttgatagctgtaattattttaaatgtctataagttattatgatatta
taaatatgttattcaaacaaatgtcttattttacctagattttttataat
attcatgatgtataagtttgcgtgtatataatgaataattcaaaagttaa
atcttatcagatcatattatgttagaatttttatgaggaatacctatttc
aattaatccacatggccaacagtatagtttaaaagaaacatgtgctttga
tttgctaagctataaccttttctgtattagaaaaatactttgacacaaac
actttacaaatgtcagcagaaaatctatactccatttcttcacattggtt
ttgtgacattgtgtttgctgatattcgacaagggataagttggcattgat
ttcctttggcactgctcttttctgttgtatgatgggaaattaaaggactg
aaatgaactgagcgtcttacaaccccagagtcactcaagtgagcaaagct
accacaggtaaaccagaattctctttgggtcttaaaggtcaattgaaact
gtaacaatagcacattcctttgaattggacgaattataaaaatattgaaa
tctgtgaagatagtaatattttgcataagctacaaaatgacttaaaatta
aacttgattttggttgtgtgtattatttcttaagtggccccaaaccttat
ctttgaaaatatatattcaattgatattgattccatccatcatgcatctc
atttgtaaacattgacggaccctcatagaaatgcacatattttagtgaca
gaatagagaattcgtgtactactaattgaaacgtacttaaaaaacgacta
tagtcattatctgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_46980223_46981374
seq2: B6Ng01-275I14.g_72_1187

seq1  GAATTCAGTTATTGAAGCTGGAAATTTCTTTGTGCTACTAGCCCCTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTATTGAAGCTGGAAATTTCTTTGTGCTACTAGCCCCTTTTT  50

seq1  CTACATTTTCCATCATTTTAGAGTAAATTTTTATTTTTTATTTATATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTTTCCATCATTTTAGAGTAAATTTTTATTTTTTATTTATATAGA  100

seq1  GTTTATATTACTGTTGCCTCTGTTCCATCATACTTAATGAACCATGATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATATTACTGTTGCCTCTGTTCCATCATACTTAATGAACCATGATTC  150

seq1  TTGCTGTTAAAAATTAACTATTTTTATTATTATTGATTCATTACTTATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTTAAAAATTAACTATTTTTATTATTATTGATTCATTACTTATAG  200

seq1  ATCATCAGTAAATTTTGATGAAGTTAAAAGTGTTGCATCATTATTTTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCAGTAAATTTTGATGAAGTTAAAAGTGTTGCATCATTATTTTACA  250

seq1  TTTTTGATAGCTGTAATTATTTTAAATGTCTATAAGTTATTATGATATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGATAGCTGTAATTATTTTAAATGTCTATAAGTTATTATGATATTA  300

seq1  TAAATATGTTATTCAAACAAATGTCTTATTTTACCTAGATTTTTTATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATGTTATTCAAACAAATGTCTTATTTTACCTAGATTTTTTATAAT  350

seq1  ATTCATGATGTATAAGTTTGCGTGTATATAATGAATAATTCAAAAGTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGATGTATAAGTTTGCGTGTATATAATGAATAATTCAAAAGTTAA  400

seq1  ATCTTATCAGATCATATTATGTTAGAATTTTTATGAGGAATACCTATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATCAGATCATATTATGTTAGAATTTTTATGAGGAATACCTATTTC  450

seq1  AATTAATCCACATGGCCAACAGTATAGTTTAAAAGAAACATGTGCTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATCCACATGGCCAACAGTATAGTTTAAAAGAAACATGTGCTTTGA  500

seq1  TTTGCTAAGCTATAACCTTTTCTGTATTAGAAAAATACTTTGACACAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAAGCTATAACCTTTTCTGTATTAGAAAAATACTTTGACACAAAC  550

seq1  ACTTTACAAATGTCAGCAGAAAATCTATACTCCATTTCTTCACATTGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACAAATGTCAGCAGAAAATCTATACTCCATTTCTTCACATTGGTT  600

seq1  TTGTGACATTGTGTTTGCTGATATTCGACAAGGGATAAGTTGGCATTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACATTGTGTTTGCTGATATTCGACAAGGGATAAGTTGGCATTGAT  650

seq1  TTCCTTTGGCACTGCTCTTTTCTGTTGTATGATGGGAAATTAAAGGACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGGCACTGCTCTTTTCTGTTGTATGATGGGAAATTAAAGGACTG  700

seq1  AAATGAACTGAGCGTCTTACAACCCCAGAGTCACTCAAGTGAGCAAAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAACTGAGCGTCTTACAACCCCAGAGTCACTCAAGTGAGCAAAGCT  750

seq1  ACCACAGGTAAACCAGAATTCTCTTTGGGTCTTAAAGGTCAATTGAAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGGTAAACCAGAATTCTCTTTGGGTCTTAAAGGTCAATTGAAACT  800

seq1  GTAACAATAGCACATTCCTTTGAATTGGACGAATTATAAAAATATTGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAATAGCACATTCCTTTGAATTGGACGAATTATAAAAATATTGAAA  850

seq1  TCTGTGAAGATAGTAATATTTTGCATAAGCTACAAAAATGACTTAAAATT  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCTGTGAAGATAGTAATATTTTGCATAAGCTAC-AAAATGACTTAAAATT  899

seq1  AAAACTTGATTTTGGTTGTGTGTATTATTTCTTAAAGTGGCCCCAAACC-  949
       |||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  -AAACTTGATTTTGGTTGTGTGTATTATTTCTT-AAGTGGCCCCAAACCT  947

seq1  TATCTTTGAAAATATATATTCAAATTGAATATTGATTTCCATCCATCATG  999
      ||||||||||||||||||||| ||||| ||||||| ||||||||||||||
seq2  TATCTTTGAAAATATATATTC-AATTG-ATATTGA-TTCCATCCATCATG  994

seq1  CATCTCAATTTGTAAACAATTGAAGGGACCCTCATAGAAAATGCAACCAT  1049
      |||||| |||||||||| |||| | |||||||||||| |||||||  |||
seq2  CATCTC-ATTTGTAAAC-ATTG-ACGGACCCTCATAG-AAATGCA--CAT  1038

seq1  ATTTAAGTTGACAGGAAAATTAGAAGAAATTTCGTGTACTTACTACATTG  1099
      |||| || ||||||   |||    ||| | ||||||||| ||||| ||||
seq2  ATTTTAG-TGACAG---AAT----AGAGAATTCGTGTAC-TACTA-ATTG  1078

seq1  AAAAAAGGGTACTTAAAAAAAAAAGGAACCTATTATGTTACAATTATCTG  1149
      |||     ||||||||||||         | | |||  |   ||||||||
seq2  AAA----CGTACTTAAAAAA---------CGACTATAGT--CATTATCTG  1113

seq1  AAT  1152
      |||
seq2  AAT  1116