BAC Information

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BAC

Clone NameB6Ng01-276C04
Chromosome10 (Build37)
Map Location 38,596,535 - 38,597,561
singlet/doubletsinglet
Overlap geneLOC100040915
Upstream genenone
Downstream geneLama4, 1700025K23Rik, Tube1, EG624165, LOC100040964, Fyn, LOC629337, Traf3ip2, LOC667964, EG667970, E130307A14Rik, Rev3l, EG666304
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276C04.bB6Ng01-276C04.g
ACCGA076990GA076991
length1,0721,053
definitionB6Ng01-276C04.b B6Ng01-276C04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaggagattttaaatttctttatttcttctctgaccaacttatc
atgagtagagagttgttcagtttccacatgtatatgggctttccgggttt
tttaatttttttttttttctgttattgaagaccagccttaggccatggtg
atctgataggacacatggaattatttcaatcttcttgtattggtagaggg
ttgttttgtgaccaattatgtggttgattttggagaaggcaccatgaggt
gctgagaagaagatatattcttttgagggtgaaatgttctgtagaaatta
gttaaatccatttggttcataacttctattagtttccctctgtctctgtt
tactttctgtttcaatgacctgtccattggtaggagtggggtgttgaagt
ctgccactattattatgtggggttcaatgtgtgttttgagctttagtaaa
gtttcttttatgaatgagggtgctcttgcatttggagcacaaatttcaga
attgagactttctcttggtgtactttttctttggtgataatgaagttccc
ttctttgtctcacttgagaacttttggttgaaagtctattttattggcta
ttagaatgacaacttgaacttgtttcttaggaccatttgcttggaagaca
tttttccagtcttttactctgaggtagtgtctgtctttgttatttaggtg
tatttcttgtgtgcagcaaaatgctggatcctgtttgcatatccaatctg
tttgtctttttataggtgagttgagtccattaatattgagagatattaaa
gacagatgactgttagtttcctgctgtgtttgcttttgtaggtggcatta
tatgcaagtggttctctccttttggctttgttgtgagatgattgatatct
tgtccttcccttggttcaggtaccttccctttttgttgggagtttcctcg
tagggtcctctgtggggctagattggatagatagatactgtttgaatttg
ggttttgttctggatatctgtttctcatcctgtttgaatgaaaagtttca
ctgggaattagtagacctgagc
gaattcttctttatgtagatgaagcattcctaggcctccaccctagtcaa
taatgtatatccaccttgggattccctacccactccccaaatctataacc
acccttcatcaccctgaataaaattgagttgcctcactgaagcagacctt
agaagtcagtcaacacttccgtattcccagctgtcctgaaccggtccctt
gcctctgcccactttgtcctcaataaccggaggccaccagcccatggggc
tggtgggaaggatcacttgggtctcttaaaggagcaaaaatgagccccct
gagctgggggcaggggttgcatttgccaaagcactaactaaagagctctg
caaaccgcatactcgaatcacctggggatcttcaagaatattgaggttct
ggttagaccacaggccagagaagttgaactctgagtctaggatgcaaaca
gcagttttcttgttgctactcaggcaattccaaacactgattacctggag
aaactaggtctgcaagttctttgcttccagtgcttccagggcaacatggt
ttattattaagaagaacacaaggagcgttaaggaggacatagttcagaat
ttggcaagcttttcccatacagaactagagagtaaatatagtgttttagg
tttcataagacttgaagcaaaattgagcttaccaggtaaatgcttgtata
gcagaaagcaaacaaattccacaacttttgatgaaagatcaaacagtggt
cagtgagcagtttcatatataactttcatgtcatgaaaactacatctatt
ttgacttttaaagaccattttaaaatatacagcctattcttaccttgtag
ttcatacaaaattaggcagtaggctagatttgggctttgtgggctaaagc
tttttggcgtttgatatagataaccatattacctccaatccaaagacaag
gcaagaaatggacatctaagtaaaaaagtcaactacctttacctaacttt
gaaaaatcacagttttctccaggacagtccgcagatgtaaatacatgtca
aga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_38596535_38597561
seq2: B6Ng01-276C04.g_90_1116 (reverse)

seq1  TCTTGACATGTATTTACATCTGCGGACTGTCCTTGGAGAAAACTGTGATT  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCTTGACATGTATTTACATCTGCGGACTGTCC-TGGAGAAAACTGTGATT  49

seq1  TTTCAAAGTTAGGT-AAGGTAGTTGACTTTTTTACTTAGATGTCCATTTC  99
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGTTAGGTAAAGGTAGTTGACTTTTTTACTTAGATGTCCATTTC  99

seq1  TTGCCTTGTCTTTGGATTGGAGGTAATATGGTTATCTATATCAAACGCCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTGTCTTTGGATTGGAGGTAATATGGTTATCTATATCAAACGCCA  149

seq1  AAAAGCTTTAGCCCACAAAGCCCAAATCTAGCCTACTGCCTAATTTTGTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTTAGCCCACAAAGCCCAAATCTAGCCTACTGCCTAATTTTGTA  199

seq1  TGAACTACAAGGTAAGAATAGGCTGTATATTTTAAAATGGTCTTTAAAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTACAAGGTAAGAATAGGCTGTATATTTTAAAATGGTCTTTAAAAG  249

seq1  TCAAAATAGATGTAGTTTTCATGACATGAAAGTTATATATGAAACTGCTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAGATGTAGTTTTCATGACATGAAAGTTATATATGAAACTGCTC  299

seq1  ACTGACCACTGTTTGATCTTTCATCAAAAGTTGTGGAATTTGTTTGCTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCACTGTTTGATCTTTCATCAAAAGTTGTGGAATTTGTTTGCTTT  349

seq1  CTGCTATACAAGCATTTACCTGGTAAGCTCAATTTTGCTTCAAGTCTTAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATACAAGCATTTACCTGGTAAGCTCAATTTTGCTTCAAGTCTTAT  399

seq1  GAAACCTAAAACACTATATTTACTCTCTAGTTCTGTATGGGAAAAGCTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTAAAACACTATATTTACTCTCTAGTTCTGTATGGGAAAAGCTTG  449

seq1  CCAAATTCTGAACTATGTCCTCCTTAACGCTCCTTGTGTTCTTCTTAATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTCTGAACTATGTCCTCCTTAACGCTCCTTGTGTTCTTCTTAATA  499

seq1  ATAAACCATGTTGCCCTGGAAGCACTGGAAGCAAAGAACTTGCAGACCTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCATGTTGCCCTGGAAGCACTGGAAGCAAAGAACTTGCAGACCTA  549

seq1  GTTTCTCCAGGTAATCAGTGTTTGGAATTGCCTGAGTAGCAACAAGAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCCAGGTAATCAGTGTTTGGAATTGCCTGAGTAGCAACAAGAAAA  599

seq1  CTGCTGTTTGCATCCTAGACTCAGAGTTCAACTTCTCTGGCCTGTGGTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTTTGCATCCTAGACTCAGAGTTCAACTTCTCTGGCCTGTGGTCT  649

seq1  AACCAGAACCTCAATATTCTTGAAGATCCCCAGGTGATTCGAGTATGCGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAACCTCAATATTCTTGAAGATCCCCAGGTGATTCGAGTATGCGG  699

seq1  TTTGCAGAGCTCTTTAGTTAGTGCTTTGGCAAATGCAACCCCTGCCCCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGAGCTCTTTAGTTAGTGCTTTGGCAAATGCAACCCCTGCCCCCA  749

seq1  GCTCAGGGGGCTCATTTTTGCTCCTTTAAGAGACCCAAGTGATCCTTCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGGGGCTCATTTTTGCTCCTTTAAGAGACCCAAGTGATCCTTCCC  799

seq1  ACCAGCCCCATGGGCTGGTGGCCTCCGGTTATTGAGGACAAAGTGGGCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCCCCATGGGCTGGTGGCCTCCGGTTATTGAGGACAAAGTGGGCAG  849

seq1  AGGCAAGGGACCGGTTCAGGACAGCTGGGAATACGGAAGTGTTGACTGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGGGACCGGTTCAGGACAGCTGGGAATACGGAAGTGTTGACTGAC  899

seq1  TTCTAAGGTCTGCTTCAGTGAGGCAACTCAATTTTATTCAGGGTGATGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGGTCTGCTTCAGTGAGGCAACTCAATTTTATTCAGGGTGATGAA  949

seq1  GGGTGGTTATAGATTTGGGGAGTGGGTAGGGAATCCCAAGGTGGATATAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTTATAGATTTGGGGAGTGGGTAGGGAATCCCAAGGTGGATATAC  999

seq1  ATTATTGACTAGGGTGGAGGCCTAGGAA  1027
      ||||||||||||||||||||||||||||
seq2  ATTATTGACTAGGGTGGAGGCCTAGGAA  1027