BAC Information

Click to search

BAC

Clone NameB6Ng01-279D21
Chromosome10 (Build37)
Map Location 23,574,476 - 23,722,900
singlet/doubletdoublet
Overlap geneVnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b
Upstream geneEya4, Rps12, 1110021L09Rik
Downstream geneTaar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7, Moxd1, LOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279D21.bB6Ng01-279D21.g
ACCGA079272GA079273
length1,0701,165
definitionB6Ng01-279D21.b B6Ng01-279D21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,574,476 - 23,575,552)(23,721,729 - 23,722,900)
sequence
gaattccaggagttctatctggtatgctgggcgtatccaattgtttgctt
gcaatagcaagggtcactatttgtatgttacctatgaggagaaaaagagg
gaggaaggctgtgtaattagtaattagggtacgtggaattacagccattt
gatggctggggagaggcctcagtccataaagtgcttgccttgaaagtgtg
gagccctgagtttgatcctcagaacccgtgtaaagaactgggacagatgc
acacatgacatcctggcagtggcaagttgggaggcagagacattctaatc
cctcgtgtttgctgccagccagtccatctttgcttggtgaatgaagtcca
gggccagtgagagatgctgtgtgagaggcagcaggaatggaggaaggaac
gaagaaatgacactcaggcttgtcatctgattccacacacgtacacctac
acacccacacccacaagtgcacccatgagcatactcgtacacacacatca
cacagtcacttgcattaagccatggcaacttgctgccagtagactacatt
atactgaaaattataataactagcaaatgtattcatgaagagtagtcttc
tttctaatatttgctacctgattttttttttttttttgcaaatcttcctc
cttataatattggcctttgatctgtcttgttgagtacatttttattcata
acatcacacgagggatgttcaaatattagaagccacatgttgcctcactc
cactcctttcgtagtctgcgataaaaataaagaccatttattccttctcc
ctgagatgtgtaccttctccctgagagccctctaaaatagaaaggaggct
gcatatcacatttttttttttttggatgtacttttgcttacgttcccact
gcacaagctccccatagagggtggcctgcagaggaccaactattttcggc
cactttgctacttgtttttgatcacagtttatagccacaaatctgtaata
tttctagttgcagtgtagcagtcctttctcatagagagttgctaacttcc
agtctgatagcgtctcaccc
gaattcatacctttactgggaggaagctttacaaagacatctgtctgcct
tgggctcaaactcagcggacagtcccaaggtccccagaggactctccact
ccccaggcaccctagcacgcccagaatcttaggatcactggtgagtggaa
cacaacatctgttcccacacaaccaggagagcctgcgtcagcatgaacag
ggacacaggaaccctgcccgaccagtggcttgggttccttcaggtcggca
ctagtctaccttctcggttttgaactcagtggacaaccccactgtcccca
gaggaggtatcacttccaaggcgctctaacacgcccaggatcttaggatc
ccaggatcttggtcacaccaggatctcagggtcccagaggcagcttgact
tcaaaaactttgacacacccagattctcaggatcacaggatctcggaatc
acaggatcacagagaaagctggactctgaggagttctgactcaactggga
ttacaggaaggacaggctccaattagatatattgaggggagggagcactt
gagataatgagatggcaggaggcaagcttaagaacagaagcaacagaaac
caaggttacttggcatcaacagaacccaactctcccatcatagcaagtcc
aggatacaccatcacaccagaaaagcaaaatatggatctcaagtcacttc
tcatgatgatgatggaggaccataagaaggacataaacaactcccttaaa
gaaatacaggagaacacaagtaaacagctagaagcccttaaggaggaaac
acaaaattcccttaaagaattacagaaaaatacatccaaacaggtgaaag
gaactgaacaaaaacaatgcaggatctaaaaatgggaagtagaaacaatt
aaaaaaaaaatcataaagggagaacaaagacatctgtcaccctaatgaag
tgagatttccaaactgtgtgtgttacctatttccccgtttagttcagtgt
tttcttccgacgcattattactttgcttttgtgcaccacctttgaaactt
ctataatcttagaaactaaaaatagtgaaggatcgttcacctataatcac
agtgaataaaagttaccatcttcaagtcactacctacacatataaggatt
ggtaagcttttagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_23574476_23575552
seq2: B6Ng01-279D21.b_44_1113

seq1  GAATTCCAGGAGTTCTATCTGGTATGCTGGGCGTATCCAATTGTTTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGAGTTCTATCTGGTATGCTGGGCGTATCCAATTGTTTGCTT  50

seq1  GCAATAGCAAGGGTCACTATTTGTATGTTACCTATGAGGAGAAAAAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAGCAAGGGTCACTATTTGTATGTTACCTATGAGGAGAAAAAGAGG  100

seq1  GAGGAAGGCTGTGTAATTAGTAATTAGGGTACGTGGAATTACAGCCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGCTGTGTAATTAGTAATTAGGGTACGTGGAATTACAGCCATTT  150

seq1  GATGGCTGGGGAGAGGCCTCAGTCCATAAAGTGCTTGCCTTGAAAGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTGGGGAGAGGCCTCAGTCCATAAAGTGCTTGCCTTGAAAGTGTG  200

seq1  GAGCCCTGAGTTTGATCCTCAGAACCCGTGTAAAGAACTGGGACAGATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCTGAGTTTGATCCTCAGAACCCGTGTAAAGAACTGGGACAGATGC  250

seq1  ACACATGACATCCTGGCAGTGGCAAGTTGGGAGGCAGAGACATTCTAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGACATCCTGGCAGTGGCAAGTTGGGAGGCAGAGACATTCTAATC  300

seq1  CCTCGTGTTTGCTGCCAGCCAGTCCATCTTTGCTTGGTGAATGAAGTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGTGTTTGCTGCCAGCCAGTCCATCTTTGCTTGGTGAATGAAGTCCA  350

seq1  GGGCCAGTGAGAGATGCTGTGTGAGAGGCAGCAGGAATGGAGGAAGGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGTGAGAGATGCTGTGTGAGAGGCAGCAGGAATGGAGGAAGGAAC  400

seq1  GAAGAAATGACACTCAGGCTTGTCATCTGATTCCACACACGTACACCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATGACACTCAGGCTTGTCATCTGATTCCACACACGTACACCTAC  450

seq1  ACACCCACACCCACAAGTGCACCCATGAGCATACTCGTACACACACATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCACACCCACAAGTGCACCCATGAGCATACTCGTACACACACATCA  500

seq1  CACAGTCACTTGCATTAAGCCATGGCAACTTGCTGCCAGTAGACTACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCACTTGCATTAAGCCATGGCAACTTGCTGCCAGTAGACTACATT  550

seq1  ATACTGAAAATTATAATAACTAGCAAATGTATTCATGAAGAGTAGTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAAAATTATAATAACTAGCAAATGTATTCATGAAGAGTAGTCTTC  600

seq1  TTTCTAATATTTGCTACCTGATTTTTTTTTTTTTTTTGCAAATCTTCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAATATTTGCTACCTGATTTTTTTTTTTTTTTTGCAAATCTTCCTC  650

seq1  CTTATAATATTGGCCTTTGATCTGTCTTGTTGAGTACATTTTTATTCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAATATTGGCCTTTGATCTGTCTTGTTGAGTACATTTTTATTCATA  700

seq1  ACATCACACGAGGGATGTTCAAATATTAGAAGCCACATGTTGCCTCACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACACGAGGGATGTTCAAATATTAGAAGCCACATGTTGCCTCACTC  750

seq1  CACTCCTTTCGTAGTCTGCGATAAAAATAAAGACCATTTATTCCTTCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTTTCGTAGTCTGCGATAAAAATAAAGACCATTTATTCCTTCTCC  800

seq1  CTGAGATGTGTACCTTCTCCCTGAGAGCCCTCTAAAATAGAAAGGAGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATGTGTACCTTCTCCCTGAGAGCCCTCTAAAATAGAAAGGAGGCT  850

seq1  GCATATCACA-TTTTTTTTTTTTGGATGTACTTTTGCTTACGTTCCCACT  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCATATCACATTTTTTTTTTTTTGGATGTACTTTTGCTTACGTTCCCACT  900

seq1  GCACAAGCTCCCCATAGAGGGTGGCCTGCAGAGGACCAACTATTTTCGGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAGCTCCCCATAGAGGGTGGCCTGCAGAGGACCAACTATTTTCGGC  950

seq1  CAC-TTGCTACTTTGTTTTTGATCACAGTTTATAGCCACAAATCTGTAAT  998
      ||| ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGCTAC-TTGTTTTTGATCACAGTTTATAGCCACAAATCTGTAAT  999

seq1  A-TTCTAGGTGCAGTGGTAGGCAAGGCCCTTCTCATAGAGGAGTTTGCTA  1047
      | |||||| |||||| ||||   || || |||||||||| ||| ||||||
seq2  ATTTCTAGTTGCAGT-GTAG--CAGTCCTTTCTCATAGA-GAG-TTGCTA  1044

seq1  ACTTTCAAGTCCTTGTATAGCGTCTCACCC  1077
      || ||| ||||  || ||||||||||||||
seq2  AC-TTCCAGTC--TG-ATAGCGTCTCACCC  1070

seq1: chr10_23721729_23722900
seq2: B6Ng01-279D21.g_67_1231 (reverse)

seq1  TCCTAAAGCCTTA-CAATCCTTATATGTTTAAGTTAGTGATTTGAAGATG  49
      |||||||  |||| |||||||||||||| | || |||||| |||||||||
seq2  TCCTAAAAGCTTACCAATCCTTATATGTGT-AGGTAGTGACTTGAAGATG  49

seq1  GTAATTTTTATTCACTGTGATTTATAAGTTGGACGATTCTTCACTTATTT  99
      |||| ||||||||||||||| |||| || || ||||| |||||| |||||
seq2  GTAACTTTTATTCACTGTGA-TTAT-AGGTGAACGATCCTTCAC-TATTT  96

seq1  TTTTAAGGTTTCTAAAGATTATAGAAGTTTTCAAAGGT-GTGCACAAAAG  148
      ||     |||||| ||||||||||||| |||||||||| |||||||||||
seq2  TT----AGTTTCT-AAGATTATAGAAG-TTTCAAAGGTGGTGCACAAAAG  140

seq1  CAAAGTTAATAATGCGTTCGGAAGAAAACACTGAACTAAACGGGGAAATA  198
      ||||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  CAAAG-TAATAATGCG-TCGGAAGAAAACACTGAACTAAACGGGGAAATA  188

seq1  GGTAACCACACACAGTTTGGAAATCTCACTTCATTAGGGTGACAGATGTC  248
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAA-CACACACAGTTTGGAAATCTCACTTCATTAGGGTGACAGATGTC  237

seq1  TTTG-TCTCCCTTTATGA-TTTTTTTTTAATTGTTTCTACTT-CCATTTT  295
      |||| ||||||||||||| ||||||||||||||||||||||| |||||||
seq2  TTTGTTCTCCCTTTATGATTTTTTTTTTAATTGTTTCTACTTCCCATTTT  287

seq1  TAGATCCTGCATTGTTTTTGTTCAGTTCC-TTCACCTGTTTGGATGTATT  344
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TAGATCCTGCATTGTTTTTGTTCAGTTCCTTTCACCTGTTTGGATGTATT  337

seq1  TTTCTGTAATTCTTTAAGGGAATTTTGTGTTTCCTCCTTAAGGGCTTCTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTAATTCTTTAAGGGAATTTTGTGTTTCCTCCTTAAGGGCTTCTA  387

seq1  GCTGTTTACTTGTGTTCTCCTGTATTTCTTTAAGGGAGTTGTTTATGTCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTACTTGTGTTCTCCTGTATTTCTTTAAGGGAGTTGTTTATGTCC  437

seq1  TTCTTATGGTCCTCCATCATCATCATGAGAAGTGACTTGAGATCCATATT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATGGTCCTCCATCATCATCATGAGAAGTGACTTGAGATCCATATT  487

seq1  TTGCTTTTCTGGTGTGATGGTGTATCCTGGACTTGCTATGATGGGAGAGT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTCTGGTGTGATGGTGTATCCTGGACTTGCTATGATGGGAGAGT  537

seq1  TGGGTTCTGTTGATGCCAAGTAACCTTGGTTTCTGTTGCTTCTGTTCTTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCTGTTGATGCCAAGTAACCTTGGTTTCTGTTGCTTCTGTTCTTA  587

seq1  AGCTTGCCTCCTGCCATCTCATTATCTCAAGTGCTCCCTCCCCTCAATAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCCTCCTGCCATCTCATTATCTCAAGTGCTCCCTCCCCTCAATAT  637

seq1  ATCTAATTGGAGCCTGTCCTTCCTGTAATCCCAGTTGAGTCAGAACTCCT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATTGGAGCCTGTCCTTCCTGTAATCCCAGTTGAGTCAGAACTCCT  687

seq1  CAGAGTCCAGCTTTCTCTGTGATCCTGTGATTCCGAGATCCTGTGATCCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCCAGCTTTCTCTGTGATCCTGTGATTCCGAGATCCTGTGATCCT  737

seq1  GAGAATCTGGGTGTGTCAAAGTTTTTGAAGTCAAGCTGCCTCTGGGACCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCTGGGTGTGTCAAAGTTTTTGAAGTCAAGCTGCCTCTGGGACCC  787

seq1  TGAGATCCTGGTGTGACCAAGATCCTGGGATCCTAAGATCCTGGGCGTGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCCTGGTGTGACCAAGATCCTGGGATCCTAAGATCCTGGGCGTGT  837

seq1  TAGAGCGCCTTGGAAGTGATACCTCCTCTGGGGACAGTGGGGTTGTCCAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCGCCTTGGAAGTGATACCTCCTCTGGGGACAGTGGGGTTGTCCAC  887

seq1  TGAGTTCAAAACCGAGAAGGTAGACTAGTGCCGACCTGAAGGAACCCAAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCAAAACCGAGAAGGTAGACTAGTGCCGACCTGAAGGAACCCAAG  937

seq1  CCACTGGTCGGGCAGGGTTCCTGTGTCCCTGTTCATGCTGACGCAGGCTC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGTCGGGCAGGGTTCCTGTGTCCCTGTTCATGCTGACGCAGGCTC  987

seq1  TCCTGGTTGTGTGGGAACAGATGTTGTGTTCCACTCACCAGTGATCCTAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTTGTGTGGGAACAGATGTTGTGTTCCACTCACCAGTGATCCTAA  1037

seq1  GATTCTGGGCGTGCTAGGGTGCCTGGGGAGTGGAGAGTCCTCTGGGGACC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGGGCGTGCTAGGGTGCCTGGGGAGTGGAGAGTCCTCTGGGGACC  1087

seq1  TTGGGACTGTCCGCTGAGTTTGAGCCCAAGGCAGACAGATGTCTTTGTAA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGACTGTCCGCTGAGTTTGAGCCCAAGGCAGACAGATGTCTTTGTAA  1137

seq1  AGCTTCCTCCCAGTAAAGGTATGAATTC  1172
      ||||||||||||||||||||||||||||
seq2  AGCTTCCTCCCAGTAAAGGTATGAATTC  1165