BAC Information

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BAC

Clone NameB6Ng01-280G18
Chromosome10 (Build37)
Map Location 17,767,523 - 17,768,706
singlet/doubletsinglet
Overlap gene3110003A17Rik
Upstream geneLOC627511, Cited2, Txlnb, LOC665321, Heca
Downstream geneReps1, LOC100039660, Ccdc28a, LOC627646, Nhsl1, Hebp2, EG627729, D10Bwg1379e, EG237300, Perp, Tnfaip3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280G18.bB6Ng01-280G18.g
ACCGA080152GA080153
length1,1791,126
definitionB6Ng01-280G18.b B6Ng01-280G18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccccagaaattgcccttaggagaagggagttgcctcacttacaag
tccaaggacagctgacacaagaactattcggagggcttaggagcctaacg
ttccctgaatagctttgggacattgggcttgatcaatcagttgattgtta
cagagtgtctctacctagctctggttgaactagacattgctatatagatc
aagctgacctcaaactcaccaagatctgcctgtgtctgcctcctaggtgc
tgggattcaaggtgtgtgccaccaggccatcttgtttagcaattttgaag
tgccacctcagctccagagatctcagggttgctggagacgtctgccactt
ctgcctcacagttttccctctgtccagttctgtgctttcttccttgttgc
tgttgttcctaacaatcaaggaacttcccatttccaagatcgctgtctca
agatttgtttcccaggaacctgacctaagttagtgacacacttctgcatt
cacttactgagttcctgctcgcaaccccttagacttattactgtaattat
tattacagcattgcaggactgaatattacataaacaaattatttcatcta
gctccactggagaagctgagctgctgctgcatcagactgatgctgggcta
taggtttgaaagccaagcaacagagctgcatccagctgctcagatgaaag
ggcagagtcaggtcaggacagtgatagatgaaggatgaaatgtccagaag
ggtaaacaagacaggcaggtagactgtatcaacaagcagacactgagcta
aagtccccggggctgtcagatcctcggacccttgacacacactccagatg
gtttagaaaacaggctggcggggccatcacaatgatggtgagataggaga
agcagttacggacaggcccagcagagcaatagctgtctgtaaacactcac
gatgtcagctgatgcgccacagatcaaagggccttctgctcgatgacctt
tagaatactgcgtgagtcctctggagagagcttctcagagcaaagaagtt
acccctttcacacgtattgttctctctctgtactgtagccatttgttgca
ttattttcaagtatatttttgcggcgtacagtcatatccagttgtgttcg
ggtacctattcctgaagacactgacaaat
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatattggatattagtccc
ctatccgatttgggataggtaatcctttcccaatctgttggtggcctttt
tgtcttattgacagtgtcttttgccttgcagaagctttgcaattttatga
ggttccatttatcgattctcgatcttacagcacaagccattgctgttcta
ttcaggaatttttcccctgtacccatatcttcaaggcttttcccctactt
tctcctctataagtttcagtgtctctggttttatgtggagttccttaatc
cactttgatttgaccttagtacaaggagataggaatggatcaattcgcat
ttttctacatgataaccaccagttgtgccagcaccatttgttgaaaatgc
tgtcttttttccactggatggttttagctcccttgtcaaagatcaagtga
ccataggtgtgtgggttcatctctgggtcttcaattctgttccattggtc
tacttgtctgtctctataccagtaccatgcagtttttatcacaattgctc
tgtagtacagctttaggtccggcatggtcattccaccagagtttctttta
tccttgagaagagtttttgctatcctaggttttttgttattccagatgaa
tctgccgattgccctttctaattcgttgaagaattgagttggaatttgga
tggggattgcattgaatctgtagattgcttttggcaagatagccattttt
acaatgttgattcctgccaatccatgagcatgggagatctttccatcttc
tgagatcaatgatactctgttatgcttgcagttcttctaagaaggctcca
cacaagcagcagactcagatgagatacagaccacccacagctcaacagaa
gatagagctttgggggactttttaggaagaacagggagaaggatttatgg
ggtctcaaaggggataagaaacctcctcagaagaaccaacagatatcaac
ttacctgacttcttgggggcttgcaagaatgaaccacccaaccagagcac
tccaactccatattgttatgcaggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_17767523_17768706
seq2: B6Ng01-280G18.b_47_1225 (reverse)

seq1  ATTTGTTCATGTCTTCTCAGGAATAGGGTCACCCAACACACACTGTGATA  50
      ||||||   |||||  ||||||||| |||  || |||||| |||| ||||
seq2  ATTTGTCAGTGTCT--TCAGGAATA-GGTACCCGAACACA-ACTG-GATA  45

seq1  TGACTGTCCCCCCCCAAAAATATACTTTAAAAATAATACAACAAATGGCT  100
      |||||||  | || ||||||||||| || |||||||| ||||||||||||
seq2  TGACTGT-ACGCCGCAAAAATATAC-TTGAAAATAATGCAACAAATGGCT  93

seq1  ACAGTAC--AGAGAGAACAATAGTGGTGAAA-GGGTAACTTCTTTGCTCC  147
      |||||||  |||||||||||||   |||||| |||||||||||||||| |
seq2  ACAGTACAGAGAGAGAACAATACGTGTGAAAGGGGTAACTTCTTTGCT-C  142

seq1  TGAGAAAGCTCTCT-CAGA-GACTCACGCAGTTATCTAAAGGTCATCGAG  195
      |||| ||||||||| |||| ||||||||||||  ||||||||||||||||
seq2  TGAG-AAGCTCTCTCCAGAGGACTCACGCAGTATTCTAAAGGTCATCGAG  191

seq1  CAGAAGG-CCTTTGATCTGTGGCGCATCAGCTGACATCGTGAGTGTTTAC  244
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGCCCTTTGATCTGTGGCGCATCAGCTGACATCGTGAGTGTTTAC  241

seq1  AGACAGCTATTGCTCTTGCTGGGGCCTGTCCTTAACTGCTTCTCCTATCT  294
      ||||||||||||||| |||| |||||||||| ||||||||||||||||||
seq2  AGACAGCTATTGCTC-TGCT-GGGCCTGTCCGTAACTGCTTCTCCTATCT  289

seq1  CACCATCATTGTGATGGCCCCGCCAGCCTGTTTTCTAAACCATCTGGAGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCATTGTGATGGCCCCGCCAGCCTGTTTTCTAAACCATCTGGAGT  339

seq1  GTGTGTCAAGGGTCCGAGGATCTGACAGCCCCGGGGACTTTAGCTCAGTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCAAGGGTCCGAGGATCTGACAGCCCCGGGGACTTTAGCTCAGTG  389

seq1  TCTGCTTGTTGATACAGTCTACCTGCCTGTCTTGTTTACCCTTCTGGACA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTGTTGATACAGTCTACCTGCCTGTCTTGTTTACCCTTCTGGACA  439

seq1  TTTCATCCTTCATCTATCACTGTCCTGACCTGACTCTGCCCTTTCATCTG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCCTTCATCTATCACTGTCCTGACCTGACTCTGCCCTTTCATCTG  489

seq1  AGCAGCTGGATGCAGCTCTGTTGCTTGGCTTTCAAACCTATAGCCCAGCA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTGGATGCAGCTCTGTTGCTTGGCTTTCAAACCTATAGCCCAGCA  539

seq1  TCAGTCTGATGCAGCAGCAGCTCAGCTTCTCCAGTGGAGCTAGATGAAAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTGATGCAGCAGCAGCTCAGCTTCTCCAGTGGAGCTAGATGAAAT  589

seq1  AATTTGTTTATGTAATATTCAGTCCTGCAATGCTGTAATAATAATTACAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTTTATGTAATATTCAGTCCTGCAATGCTGTAATAATAATTACAG  639

seq1  TAATAAGTCTAAGGGGTTGCGAGCAGGAACTCAGTAAGTGAATGCAGAAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGTCTAAGGGGTTGCGAGCAGGAACTCAGTAAGTGAATGCAGAAG  689

seq1  TGTGTCACTAACTTAGGTCAGGTTCCTGGGAAACAAATCTTGAGACAGCG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCACTAACTTAGGTCAGGTTCCTGGGAAACAAATCTTGAGACAGCG  739

seq1  ATCTTGGAAATGGGAAGTTCCTTGATTGTTAGGAACAACAGCAACAAGGA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGAAATGGGAAGTTCCTTGATTGTTAGGAACAACAGCAACAAGGA  789

seq1  AGAAAGCACAGAACTGGACAGAGGGAAAACTGTGAGGCAGAAGTGGCAGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCACAGAACTGGACAGAGGGAAAACTGTGAGGCAGAAGTGGCAGA  839

seq1  CGTCTCCAGCAACCCTGAGATCTCTGGAGCTGAGGTGGCACTTCAAAATT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCCAGCAACCCTGAGATCTCTGGAGCTGAGGTGGCACTTCAAAATT  889

seq1  GCTAAACAAGATGGCCTGGTGGCACACACCTTGAATCCCAGCACCTAGGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAACAAGATGGCCTGGTGGCACACACCTTGAATCCCAGCACCTAGGA  939

seq1  GGCAGACACAGGCAGATCTTGGTGAGTTTGAGGTCAGCTTGATCTATATA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACACAGGCAGATCTTGGTGAGTTTGAGGTCAGCTTGATCTATATA  989

seq1  GCAATGTCTAGTTCAACCAGAGCTAGGTAGAGACACTCTGTAACAATCAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTCTAGTTCAACCAGAGCTAGGTAGAGACACTCTGTAACAATCAA  1039

seq1  CTGATTGATCAAGCCCAATGTCCCAAAGCTATTCAGGGAACGTTAGGCTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGATCAAGCCCAATGTCCCAAAGCTATTCAGGGAACGTTAGGCTC  1089

seq1  CTAAGCCCTCCGAATAGTTCTTGTGTCAGCTGTCCTTGGACTTGTAAGTG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCCTCCGAATAGTTCTTGTGTCAGCTGTCCTTGGACTTGTAAGTG  1139

seq1  AGGCAACTCCCTTCTCCTAAGGGCAATTTCTGGGGAATTC  1184
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACTCCCTTCTCCTAAGGGCAATTTCTGGGGAATTC  1179