BAC Information

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BAC

Clone NameB6Ng01-280I16
Chromosome10 (Build37)
Map Location 36,401,855 - 36,402,547
singlet/doubletsinglet
Overlap geneHs3st5
Upstream geneLOC100041585, LOC667860
Downstream geneHdac2, Marcks, LOC100040846
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280I16.bB6Ng01-280I16.g
ACCGA080242GA080243
length1,167693
definitionB6Ng01-280I16.b B6Ng01-280I16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagaatgtcttttatttctttatttctgtcctgtcctatttttt
attcagtagagacctttacaatttccatgagtttgtaagttttctgctgt
tttgttggtgatatcgagctttgattcatggagatctgacagtgagttat
ttcaaatttttgtataagttgagacttgctttatgacagagcttgtgctc
aattttggagaaagttccacggggtgctcagaagaaagtgtattcttttg
tgttttggtgaacatttctgtaaatatctgttaggctcatttggtttata
atgtctgttagctccagtatttctctgtttagcttttggttggatgacct
gtccattggtgagattagggtactgaagtctcccactatcagtgtgtgag
gatcaaaatgtgatttaagctatagtagtgtttgttttgcaaaacatgag
tgcccccatgtttggggcctatatgttaagaatagaagtttcatcttggt
ggatttgtcctttgatgagtataatgtccttctccatctcttttgactgg
ttttatttatttagtttttagatgttaaaatatttacaccagcttaattt
ttaggtccatttgcttgtaatatctttttataaatttctaccttgaggta
atgtctatcctttgatgttgaggtgtgtttcttggatgcagcagaagaaa
ggatcctgcttttacatcagttctgtcagtttgtgtctttttattggggg
aattgagttcattgattttgagcgatattaatgactgtagtggctattcc
tggttgtcaacttgactatatttgggaatgaactacaatccagaattgaa
aggctcaccagtgaccctttatctggaggcttggagatccttatctggat
cttggtatggagatcttgagcccatagtggctatggatatcagaagattg
aattctccgagttcaaggaacacacctttaatcttgggctacaccttctg
cctggagaacaatataaggaccatgggagaaggagtctaagctctttgct
ctgcctcctttgccctgcttgctgtgtgtaagacctgattaactgcctaa
tctcttgaacttccattcacatgcttgcgactcgtagacccagtggtggt
gaaatgggggctgcgct

gaattcaatcaccctcccaaataaatacataaggagtaatacctaaagtt
tcctttggtttcacaatgtaacaatccagtcagatcaacctagaatgaaa
agccaattgagccttttgttttacagttgaaaactggctactcagaagat
actgacagactgtacatgttttgaggatgtatctaatttaaacaacacaa
aacaataatatattgtagaaattagaaagatgataaggaaataaaacact
atcaatcagagaagaagaaaatattataccagaagcacagttacagagaa
gaaactatgtctggaaactaaaattagaagaaattgaaatggaatgaagg
gtaagtgtaggtaaaatggtaggaaggtgggaaataagggagatttaaaa
atttgcctattgatgccatatctggatgattacagtgtccacttatgagt
aaactattttaatggcagaggaaaaccatcaaagcaattacattaaattg
gaaaatatatattttacaattgtaacattgtgtctccagcacagggaatg
taaaatagactgtattcattataaagcttaaaatcatgggggactgtggg
gaaggccttaagtgataccagagtatgtacagagttcatagaattgataa
agtacccaaatggcagcagaactcaacagcacagctagtgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_36401855_36402547
seq2: B6Ng01-280I16.g_65_757

seq1  GAATTCAATCACCCTCCCAAATAAATACATAAGGAGTAATACCTAAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCACCCTCCCAAATAAATACATAAGGAGTAATACCTAAAGTT  50

seq1  TCCTTTGGTTTCACAATGTAACAATCCAGTCAGATCAACCTAGAATGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGGTTTCACAATGTAACAATCCAGTCAGATCAACCTAGAATGAAA  100

seq1  AGCCAATTGAGCCTTTTGTTTTACAGTTGAAAACTGGCTACTCAGAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAATTGAGCCTTTTGTTTTACAGTTGAAAACTGGCTACTCAGAAGAT  150

seq1  ACTGACAGACTGTACATGTTTTGAGGATGTATCTAATTTAAACAACACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACAGACTGTACATGTTTTGAGGATGTATCTAATTTAAACAACACAA  200

seq1  AACAATAATATATTGTAGAAATTAGAAAGATGATAAGGAAATAAAACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAATATATTGTAGAAATTAGAAAGATGATAAGGAAATAAAACACT  250

seq1  ATCAATCAGAGAAGAAGAAAATATTATACCAGAAGCACAGTTACAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCAGAGAAGAAGAAAATATTATACCAGAAGCACAGTTACAGAGAA  300

seq1  GAAACTATGTCTGGAAACTAAAATTAGAAGAAATTGAAATGGAATGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTATGTCTGGAAACTAAAATTAGAAGAAATTGAAATGGAATGAAGG  350

seq1  GTAAGTGTAGGTAAAATGGTAGGAAGGTGGGAAATAAGGGAGATTTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTGTAGGTAAAATGGTAGGAAGGTGGGAAATAAGGGAGATTTAAAA  400

seq1  ATTTGCCTATTGATGCCATATCTGGATGATTACAGTGTCCACTTATGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCTATTGATGCCATATCTGGATGATTACAGTGTCCACTTATGAGT  450

seq1  AAACTATTTTAATGGCAGAGGAAAACCATCAAAGCAATTACATTAAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATTTTAATGGCAGAGGAAAACCATCAAAGCAATTACATTAAATTG  500

seq1  GAAAATATATATTTTACAATTGTAACATTGTGTCTCCAGCACAGGGAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATATATTTTACAATTGTAACATTGTGTCTCCAGCACAGGGAATG  550

seq1  TAAAATAGACTGTATTCATTATAAAGCTTAAAATCATGGGGGACTGTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGACTGTATTCATTATAAAGCTTAAAATCATGGGGGACTGTGGG  600

seq1  GAAGGCCTTAAGTGATACCAGAGTATGTACAGAGTTCATAGAATTGATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCCTTAAGTGATACCAGAGTATGTACAGAGTTCATAGAATTGATAA  650

seq1  AGTACCCAAATGGCAGCAGAACTCAACAGCACAGCTAGTGATA  693
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCCAAATGGCAGCAGAACTCAACAGCACAGCTAGTGATA  693


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