BAC Information

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BAC

Clone NameB6Ng01-282I20
Chromosome10 (Build37)
Map Location 56,579,305 - 56,579,981
singlet/doubletsinglet
Overlap genenone
Upstream geneD630037F22Rik, 1700060H10Rik, EG629732, Gja1, EG668347, LOC100042622, LOC668355
Downstream geneLOC100042628, EG629739, LOC629742, LOC668363, Hsf2, Serinc1, LOC211619, LOC668374, Pkib, Ppia-ps10_506.1, Fabp7, Smpdl3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282I20.bB6Ng01-282I20.g
ACCGA081738GA081739
length6791,183
definitionB6Ng01-282I20.b B6Ng01-282I20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctcataagggacaaataagagcacgggaaatctaatcataaa
agcagaatactaaaaaatgatgtaagccaacaaaaaaaatttgaaaagct
aagcagataaaaatccaaaagtcaaatatgaactaagaaagccccaaaat
acaatttaatgtggcgggagggggggggggacatcaattttcaagtaggt
ggcccttactacctatccaaatccaaaggtggagagttcttaaaattttg
cttccaatgagcagagtataaaagaggagagtgagaggaagaaaaatttt
tcagtggagaaatctgagctacattgcctaacctgggtgatggaacagca
gcacagccaggagtcatgtacagtctaacagtaaggaaaacacaacacac
tgaggtccagccgtactttgtaaaacacctatcagcatcccttaaaaaca
ccaagagcttgccatctaagggtcaaactgtgacaaaacaagagaaggtt
gagaggggagaccaagtaaatgtaatatggaatcctgggtagaatttcag
accaacaacaacaaagaaggactttagtggggaaaaaaaacaaaaaacaa
aaataccctttgtgtcatctgaattaaatctgagatttagccattatata
tgtgccaggattggttttcttacggcgac
gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccagctaattggtcaagaaaaaagccaaaagcggctggcgaaggccagt
ttgctgattggcctcagggcagtcggcttcaaggtccgccctatgcggag
tccccgccctgcgtagtgcgtcagcaatgcgcagagaggcagtgcgcaga
gaggcagtgcgcagactcattcattcccagagaggaacaaaggaaaatac
aacaggcatttccggtctttgaaggagccgagggtgggcgtgtccacgct
ccggtagaatacttacaaattaaagaaattgccgagtcggtccgtaaata
cggaaccaatgctaattttaccttggtgcagttagacaggctcgctggca
tggcactaactcctgctgactggcaaacggttgtaaaagccgctctccct
agtatgggcaaatatatggaatggagagcgctttggcacgaagctgcaca
agcgcaggcccgagcaaacgcagctgctttgactccagagcagagagatt
ggacttttgacttgttaacgggtcagggagcttattctgctgatcagaca
aactaccattggggagcttatgcccagatttcttccacggctattagggc
ctggaaggcgctctctcgagcaggtgaaaccactggtcagttaacaaaga
taatccagggacctcaggaatccttctcagattttgtggccagaatgaca
gaggcagcagagcgtatttttggagagtcagagcaagctgcgcctctgat
agaacagctaatctatgagcaagccacaaaggagtgccgagcggccatag
ccccaagaaagaacaaaggcttacaagactggctcaggttctgtcgagag
cttgggggacctctcagcaatgcaggtttagcggctgccatccttcaatc
ccaaaaccgcttcatggagcagaaatgatcggaggacatgttttaactgc
agaaagccttgggcattttaagaaagattgcagagctcagataacaagga
gggaccttctccactctttgctctaagtgtggccatggttaatcatagag
cttgacagtgtcgcctctgtgaggaattagcaagtcttccaacttgaatg
tcaatcaacctatgttgtccataaaacgggtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_56579305_56579981
seq2: B6Ng01-282I20.b_45_723 (reverse)

seq1  GTCGCCGTAAG-AAACCAATCCTGGCACATTACTAATGGCTAAATCTCAG  49
      ||||||||||| ||||||||||||||||||   |||||||||||||||||
seq2  GTCGCCGTAAGAAAACCAATCCTGGCACATATATAATGGCTAAATCTCAG  50

seq1  ATTTTATTCAGATGACAC-AAGGGTATTTTTGTTTTTTGTTTTTTTTCCC  98
      |||| ||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATTTAATTCAGATGACACAAAGGGTATTTTTGTTTTTTGTTTTTTTTCCC  100

seq1  CACTAAAGTCCTTCTTTGTTGTTGTTGGTCTGAAATTCTACCCAGGATTC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAGTCCTTCTTTGTTGTTGTTGGTCTGAAATTCTACCCAGGATTC  150

seq1  CATATTACATTTACTTGGTCTCCCCTCTCAACCTTCTCTTGTTTTGTCAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTACATTTACTTGGTCTCCCCTCTCAACCTTCTCTTGTTTTGTCAC  200

seq1  AGTTTGACCCTTAGATGGCAAGCTCTTGGTGTTTTTAAGGGATGCTGATA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGACCCTTAGATGGCAAGCTCTTGGTGTTTTTAAGGGATGCTGATA  250

seq1  GGTGTTTTACAAAGTACGGCTGGACCTCAGTGTGTTGTGTTTTCCTTACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTTACAAAGTACGGCTGGACCTCAGTGTGTTGTGTTTTCCTTACT  300

seq1  GTTAGACTGTACATGACTCCTGGCTGTGCTGCTGTTCCATCACCCAGGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGACTGTACATGACTCCTGGCTGTGCTGCTGTTCCATCACCCAGGTT  350

seq1  AGGCAATGTAGCTCAGATTTCTCCACTGAAAAATTTTTCTTCCTCTCACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATGTAGCTCAGATTTCTCCACTGAAAAATTTTTCTTCCTCTCACT  400

seq1  CTCCTCTTTTATACTCTGCTCATTGGAAGCAAAATTTTAAGAACTCTCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTTTATACTCTGCTCATTGGAAGCAAAATTTTAAGAACTCTCCA  450

seq1  CCTTTGGATTTGGATAGGTAGTAAGGGCCACCTACTTGAAAATTGATGTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGATTTGGATAGGTAGTAAGGGCCACCTACTTGAAAATTGATGTC  500

seq1  CCCCCCCCCCTCCCGCCACATTAAATTGTATTTTGGGGCTTTCTTAGTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCTCCCGCCACATTAAATTGTATTTTGGGGCTTTCTTAGTTC  550

seq1  ATATTTGACTTTTGGATTTTTATCTGCTTAGCTTTTCAAATTTTTTTTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGACTTTTGGATTTTTATCTGCTTAGCTTTTCAAATTTTTTTTGT  600

seq1  TGGCTTACATCATTTTTTAGTATTCTGCTTTTATGATTAGATTTCCCGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTACATCATTTTTTAGTATTCTGCTTTTATGATTAGATTTCCCGTG  650

seq1  CTCTTATTTGTCCCTTATGAGAAGAATTC  677
      |||||||||||||||||||||||||||||
seq2  CTCTTATTTGTCCCTTATGAGAAGAATTC  679