BAC Information

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BAC

Clone NameB6Ng01-282L21
Chromosome10 (Build37)
Map Location 101,696,628 - 101,697,766
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneMgat4c, LOC667652, Nts, Pamci, LOC382413, Cart1, Lrriq1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282L21.bB6Ng01-282L21.g
ACCGA081881GA081882
length1,1251,124
definitionB6Ng01-282L21.b B6Ng01-282L21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccatattgtacattatcatgcctctctcaaattcaggctattgt
ttaattgttttacacatgggtgcacccccacacacacacaaaatgaggtg
agccaactcagtgttgttcatacacataaatatttagtgctgacaacttg
gtattttataaccagttaaaatgcttttcccttgggtagactgcttttcc
ctctttcaaaagtcatcaatgtctgtaaatctttaaggagatggtacctg
aaagatttttttccacctacactggcatgtcaactggtgctttcattgtt
aagttctcatttaaacatccatattttggacatgcactgtttctgcttgc
ctgtcatatatagaagacacatttgtttacttgtttgttttcagtagata
tctcggtcctctgggtcttattatctttctttcccctcttttataaatgt
tctctggatcttagatataggacttgggtgctatgcctcctctatatttt
aataggatggttgctttggtttggtttggtttggttttgtaagatgggga
tactctggctgttctggaactcactctatagaccaagcaagctggcctga
aattcacatatctacctgtgtctagctcctgagtggtagagttaaaggaa
tgtgtcaacaccatctgtttttattaatggtctccttaaaatttttattt
tggattccttttagccaatttgtaaccttttgatgcttttctttgagagt
tgtattcagtttacccttttattgaatgccggtgttagtttcactatgtc
tctgtttagtttctgtttccattatctgtccatttatgagagttgggtgt
ggaagtctcccactatttattgtgtgaggtgcaatgtgtgctttgagctt
taataaactttattttatgaatgtgggtgtcctgtatttggagcatagat
attcagaattgtgctctaagatcatgagtctacaaatgggaactcctaaa
tgctatgcttctggtaaggcaaaggacactgtcataggacaaatggcaca
aacctgattgggaaagattcttttcagttttacgactgataaggctcata
tttcaatatatccaacaagctactc

gaattccaaacaataacaatatcaacaccatccagaaaatggtaggaaac
atacaagtcaaaaatttcctacagagctacaaaatgggctggtttataaa
aagtcccgcattgtagtgaaataaaaatatctatttacaagttgggaggt
ttctagtgtttttttttatcatatttgtatggtatataaatatatcatat
ttctatatttagagttatattcatatgcattatggatgtatatctatgtg
ccatatatatatcatgtgaacatagaattttcttataattggtatttcag
tatgctccctagaagtttcatcactattaacatatctgaattggacattt
cctctacttgcttttccccttgtctttcacatgtatagagactgcagcca
gttctcaagaaatcaagccctgaatgtaaagattgttgttaactaattat
tccttcattttgtacatacaccctatcaaaatgatgccctattttatcga
acataatgtgtcataaagcacatttcttggagaagaacgtgattgatgta
gtacacactaacactactacttagctgttattttcctttctttgtccatg
gctgagttgtcagttaaaataagtcagaataaatttttaactcttgatga
aagtgatttactgtgtagtgtttaccaaattaccttaatccaatgagaca
ggaaacagaagtataaaatacaataagcaaatatatttcaaactgacaac
agagaatattagaaccccaaattcattggaagcagtcactcaaatcttag
aaattatctgattggtcataatcttactccaaatggcccatttacaccat
aaccaaggaaaccctaaaagtgactgatcaagtactatcactttgcaggc
agaataacatactgggttccacagaggtcagtctattttttaaaaagagt
gcaacagatcttagattgtctctacaaaccctccatcagagatatcacat
ccaacatatctcacagtgttcccaaacacatacatgagaaaagtagcgtc
cagctactctgtgccaccttgagaaacgactatctcacatcttctcttaa
tttacagcagagtgagttacttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101696628_101697766
seq2: B6Ng01-282L21.g_63_1186

seq1  GAATTCCAAACAATAACAATATCAACACCATCCAGAAAATGGTAGGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACAATAACAATATCAACACCATCCAGAAAATGGTAGGAAAC  50

seq1  ATACAAGTCAAAAATTTCCTACAGAGCTACAAAATGGGCTGGTTTATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGTCAAAAATTTCCTACAGAGCTACAAAATGGGCTGGTTTATAAA  100

seq1  AAGTCCCGCATTGTAGTGAAATAAAAATATCTATTTACAAGTTGGGAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCGCATTGTAGTGAAATAAAAATATCTATTTACAAGTTGGGAGGT  150

seq1  TTCTAGTGTTTTTTTTTATCATATTTGTATGGTATATAAATATATCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTGTTTTTTTTTATCATATTTGTATGGTATATAAATATATCATAT  200

seq1  TTCTATATTTAGAGTTATATTCATATGCATTATGGATGTATATCTATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATTTAGAGTTATATTCATATGCATTATGGATGTATATCTATGTG  250

seq1  CCATATATATATCATGTGAACATAGAATTTTCTTATAATTGGTATTTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATATATATCATGTGAACATAGAATTTTCTTATAATTGGTATTTCAG  300

seq1  TATGCTCCCTAGAAGTTTCATCACTATTAACATATCTGAATTGGACATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTCCCTAGAAGTTTCATCACTATTAACATATCTGAATTGGACATTT  350

seq1  CCTCTACTTGCTTTTCCCCTTGTCTTTCACATGTATAGAGACTGCAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACTTGCTTTTCCCCTTGTCTTTCACATGTATAGAGACTGCAGCCA  400

seq1  GTTCTCAAGAAATCAAGCCCTGAATGTAAAGATTGTTGTTAACTAATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAAGAAATCAAGCCCTGAATGTAAAGATTGTTGTTAACTAATTAT  450

seq1  TCCTTCATTTTGTACATACACCCTATCAAAATGATGCCCTATTTTATCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCATTTTGTACATACACCCTATCAAAATGATGCCCTATTTTATCGA  500

seq1  ACATAATGTGTCATAAAGCACATTTCTTGGAGAAGAACGTGATTGATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATGTGTCATAAAGCACATTTCTTGGAGAAGAACGTGATTGATGTA  550

seq1  GTACACACTAACACTACTACTTAGCTGTTATTTTCCTTTCTTTGTCCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACACTAACACTACTACTTAGCTGTTATTTTCCTTTCTTTGTCCATG  600

seq1  GCTGAGTTGTCAGTTAAAATAAGTCAGAATAAATTTTTAACTCTTGATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTTGTCAGTTAAAATAAGTCAGAATAAATTTTTAACTCTTGATGA  650

seq1  AAGTGATTTACTGTGTAGTGTTTACCAAATTACCTTAATCCAATGAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATTTACTGTGTAGTGTTTACCAAATTACCTTAATCCAATGAGACA  700

seq1  GGAAACAGAAGTATAAAATACAATAAGCAAATATATTTCAAACTGACAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAGAAGTATAAAATACAATAAGCAAATATATTTCAAACTGACAAC  750

seq1  AGAGAATATTAGAACCCCAAATTCATTGGAAGCAGTCACTCAAATCTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATATTAGAACCCCAAATTCATTGGAAGCAGTCACTCAAATCTTAG  800

seq1  AAATTATCTGATTGGTCATAATCTTACTCCAAATGGCCCATTTACACCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATCTGATTGGTCATAATCTTACTCCAAATGGCCCATTTACACCAT  850

seq1  AACCAAGGAAACCCTAAAAGTGACTGATCAAGTACTATCACTTTGCAGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGGAAACCCTAAAAGTGACTGATCAAGTACTATCACTTTGCAGGC  900

seq1  AGAATAACATACTGGGTTCCACAGAGGTCAGTCTATTTTTTAAAAAGAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAACATACTGGGTTCCACAGAGGTCAGTCTATTTTTTAAAAAGAGT  950

seq1  GCAACAGATCTTAGATTGTCTCTACAAACCCCTCCATCAGGAGATATCAC  1000
      |||||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  GCAACAGATCTTAGATTGTCTCTACAAA-CCCTCCATCA-GAGATATCAC  998

seq1  AATCCCAACATATCTCACAGTGTTTCCCAAACACATACATGAGAAAAGTA  1050
      |   |||||||||||||||||| |||||||||||||||||||||||||||
seq2  A--TCCAACATATCTCACAGTG-TTCCCAAACACATACATGAGAAAAGTA  1045

seq1  GAAGGGCCAGCTACTCCTGTGCCACCTGGAGAAAGGACCTATTCTCACAT  1100
      |   | ||||||||| ||||||||||| |||||| || ||| ||||||||
seq2  G--CGTCCAGCTACT-CTGTGCCACCTTGAGAAACGA-CTA-TCTCACAT  1090

seq1  CTCTTCCTTATATTACAGCAGAGTTGGGAGTTTACTTAA  1139
      || |  ||||  ||||||||||||   ||| ||||||||
seq2  CT-TCTCTTAATTTACAGCAGAGT---GAG-TTACTTAA  1124


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