BAC Information

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BAC

Clone NameB6Ng01-284D08
Chromosome10 (Build37)
Map Location 56,549,111 - 56,690,019
singlet/doubletdoublet
Overlap geneLOC100042628, EG629739
Upstream geneD630037F22Rik, 1700060H10Rik, EG629732, Gja1, EG668347, LOC100042622, LOC668355
Downstream geneLOC629742, LOC668363, Hsf2, Serinc1, LOC211619, LOC668374, Pkib, Ppia-ps10_506.1, Fabp7, Smpdl3a, EG664783
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284D08.bB6Ng01-284D08.g
ACCGA082970GA082971
length1,152965
definitionB6Ng01-284D08.b B6Ng01-284D08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,688,855 - 56,690,019)(56,549,111 - 56,549,816)
sequence
gaattccattcaaatagttgcaaaacagtccttaatacttcatcttgtct
attaatggtcagtttgtctctgcagtcaaacagaacaatcttgttttctc
taatgaaaagaaaattaagttaaatcttaaaagaaggggatttattgttt
gtcgttagacaatggacactagataccgcagagtaatgaaataaatacaa
ggagcaaagacagagaatttctcaagcatttctcacacagccatgcttca
gctggatgctcccccacaggcctgtcccttggcagaagagtgttctttag
ccttccatatgctgcactctctaagagatatacaatgcccgttaaaatag
taaaggtcccagaatgccgaagtcaagaaatccatctaatggcctttcca
tgctttataattctacaaagcttttcaagtatagtctctactataacttt
atagatttggtgagagggaatatgcctagagtactcctatacaaacacta
catgtgtgtcctagtgcactagaagtcaagccccaggaaaatggaatcac
ttagaggcaatcaaaacttttggtagaaaaacatgtctttgaatgctaag
agcacggaagaaagaaattatataggctgggaaccatgtactatggcatt
taggggagagtggagattcaaaagaatgggaaagaaatcaagaaatggga
agcaaagtctaataattcaatccactaggccatgtgttaacgtaatgttt
ctgatggaagtatacaggacttcataggctccagagtttttaagatgatg
ctatcttttactaaatcagtacctggtcaccctgctgcccaactggcttt
ggaaatctccacttctctgggattctagaggagagagtaggcaggctcac
aaggcttcttggacattgaatttctcttacaaaacaatagtttgttgaat
tctatgccaactaagcagatgggattacatttctctctcaatgtgcacaa
attaaaaaatttaagagaaaaagtatttggtagaccagctttctattttg
ctgatcagagcatttacgaaattgattgaaatgcctgctgaaccccatgc
acagccatgctgtcttcagaaccatccattgactgcaaatttctattagc
aa
gaattcctgccaggtggttgtatagcggcttcaatttctttggcagcaac
aactccactttatccatgagttggtggtagatggaccacagtccttgggc
actgggtgctgtgtcctcgttcctggctgacaacagagggtggctaggtc
actttctctctacagcgctggggcatccacctctgccctagggtgccctt
cccaggctcttgattgggagacttttaatgattgcatctatttccttaga
ggctatgggactgtttacatagtttatgtggtcctgatttatgtttggta
cctaacaaaacctgatttatgttttgtacctaaaacattgtccatttcat
ctagattttctagttttgttgagtataggcttttgtagtaggatctgata
atttttttgaatttcctcaattttttgttgttatgtctctcttttcattt
ctgatttgttaatttggatactgtctctgtgctctttatttagtttggct
aagtgtttatctatgttggtgattttctcaaagaactggctcttagtttt
gcagatttttttgtatagttctctttatttctacttgatgaacttcagtc
ctgagtttgattatttcctgcatctactcctcttgggtggatttgcttct
ttctgttctagagcattcagatgtgctgttcagatgataatacaagctct
tgctaatttctttatgaaggtactcaatgctgtgaattttcctcttagca
tgctttcattgtgttctgtaagtttgggtatactctgacttcattgttgt
taaattccagaaagtctttaattcttccttgagcaagttatcattgaata
gagaatttttcagtttccatgaatatgtgtgttttctgttatttttgttg
ttattgaagaccaatctttactctgggggtgatctggtagaatgcatggg
gtttaattgaatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_56688855_56690019
seq2: B6Ng01-284D08.b_46_1197 (reverse)

seq1  TTGCTTAATAGAAATTTTCAGTCAATGGGATTGGTGTCTGGAGCCAGGCA  50
      |||| |||||||||||| ||||||||||   |||| |||| || || |||
seq2  TTGC-TAATAGAAATTTGCAGTCAATGG--ATGGT-TCTGAAGACA-GCA  45

seq1  TGCCTGGTGGCACTGGGTTTCAGCCAAGCATTTCAAACCATTTCCGTAAA  100
      || |||   ||| |||| ||||| || ||||||||| | |||| ||||||
seq2  TGGCTG--TGCA-TGGGGTTCAG-CAGGCATTTCAATCAATTT-CGTAAA  90

seq1  TGCTTCTGATCCAGCAAAATAGAAAGCTGGTTCTTACCAAATACTTTTTC  150
      ||| |||||| ||||||||||||||||||||   ||||||||||||||||
seq2  TGC-TCTGAT-CAGCAAAATAGAAAGCTGGT--CTACCAAATACTTTTTC  136

seq1  TCTTTAATTTTTTAATTTGTGCACATTGAGAGAGAAATGTAAT-CCATCT  199
      |||| |||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCTTAAATTTTTTAATTTGTGCACATTGAGAGAGAAATGTAATCCCATCT  186

seq1  GCTTAGTTGGCATAGAATTCAACAAACTATTGTTTTGTAAGAGAAATTCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGTTGGCATAGAATTCAACAAACTATTGTTTTGTAAGAGAAATTCA  236

seq1  ATGTCCAAGAAGCCTTGTGAGCCTGCCTACTCTCTCCTCTAGAATCCCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCAAGAAGCCTTGTGAGCCTGCCTACTCTCTCCTCTAGAATCCCAG  286

seq1  AGAAGTGGAGATTTCCAAAGCCAGTTGGGCAGCAGGGTGACCAGGTACTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGGAGATTTCCAAAGCCAGTTGGGCAGCAGGGTGACCAGGTACTG  336

seq1  ATTTAGTAAAAGATAGCATCATCTTAAAAACTCTGGAGCCTATGAAGTCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTAAAAGATAGCATCATCTTAAAAACTCTGGAGCCTATGAAGTCC  386

seq1  TGTATACTTCCATCAGAAACATTACGTTAACACATGGCCTAGTGGATTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACTTCCATCAGAAACATTACGTTAACACATGGCCTAGTGGATTGA  436

seq1  ATTATTAGACTTTGCTTCCCATTTCTTGATTTCTTTCCCATTCTTTTGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAGACTTTGCTTCCCATTTCTTGATTTCTTTCCCATTCTTTTGAA  486

seq1  TCTCCACTCTCCCCTAAATGCCATAGTACATGGTTCCCAGCCTATATAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACTCTCCCCTAAATGCCATAGTACATGGTTCCCAGCCTATATAAT  536

seq1  TTCTTTCTTCCGTGCTCTTAGCATTCAAAGACATGTTTTTCTACCAAAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTCCGTGCTCTTAGCATTCAAAGACATGTTTTTCTACCAAAAG  586

seq1  TTTTGATTGCCTCTAAGTGATTCCATTTTCCTGGGGCTTGACTTCTAGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTGCCTCTAAGTGATTCCATTTTCCTGGGGCTTGACTTCTAGTG  636

seq1  CACTAGGACACACATGTAGTGTTTGTATAGGAGTACTCTAGGCATATTCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGACACACATGTAGTGTTTGTATAGGAGTACTCTAGGCATATTCC  686

seq1  CTCTCACCAAATCTATAAAGTTATAGTAGAGACTATACTTGAAAAGCTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACCAAATCTATAAAGTTATAGTAGAGACTATACTTGAAAAGCTTT  736

seq1  GTAGAATTATAAAGCATGGAAAGGCCATTAGATGGATTTCTTGACTTCGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAATTATAAAGCATGGAAAGGCCATTAGATGGATTTCTTGACTTCGG  786

seq1  CATTCTGGGACCTTTACTATTTTAACGGGCATTGTATATCTCTTAGAGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGGGACCTTTACTATTTTAACGGGCATTGTATATCTCTTAGAGAG  836

seq1  TGCAGCATATGGAAGGCTAAAGAACACTCTTCTGCCAAGGGACAGGCCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCATATGGAAGGCTAAAGAACACTCTTCTGCCAAGGGACAGGCCTG  886

seq1  TGGGGGAGCATCCAGCTGAAGCATGGCTGTGTGAGAAATGCTTGAGAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAGCATCCAGCTGAAGCATGGCTGTGTGAGAAATGCTTGAGAAAT  936

seq1  TCTCTGTCTTTGCTCCTTGTATTTATTTCATTACTCTGCGGTATCTAGTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCTTTGCTCCTTGTATTTATTTCATTACTCTGCGGTATCTAGTG  986

seq1  TCCATTGTCTAACGACAAACAATAAATCCCCTTCTTTTAAGATTTAACTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGTCTAACGACAAACAATAAATCCCCTTCTTTTAAGATTTAACTT  1036

seq1  AATTTTCTTTTCATTAGAGAAAACAAGATTGTTCTGTTTGACTGCAGAGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTTTTCATTAGAGAAAACAAGATTGTTCTGTTTGACTGCAGAGA  1086

seq1  CAAACTGACCATTAATAGACAAGATGAAGTATTAAGGACTGTTTTGCAAC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGACCATTAATAGACAAGATGAAGTATTAAGGACTGTTTTGCAAC  1136

seq1  TATTTGAATGGAATTC  1165
      ||||||||||||||||
seq2  TATTTGAATGGAATTC  1152

seq1: chr10_56549111_56549816
seq2: B6Ng01-284D08.g_63_768

seq1  GAATTCCTGCCAGGTGGTTGTATAGCGGCTTCAATTTCTTTGGCAGCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCCAGGTGGTTGTATAGCGGCTTCAATTTCTTTGGCAGCAAC  50

seq1  AACTCCACTTTATCCATGAGTTGGTGGTAGATGGACCACAGTCCTTGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCACTTTATCCATGAGTTGGTGGTAGATGGACCACAGTCCTTGGGC  100

seq1  ACTGGGTGCTGTGTCCTCGTTCCTGGCTGACAACAGAGGGTGGCTAGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTGCTGTGTCCTCGTTCCTGGCTGACAACAGAGGGTGGCTAGGTC  150

seq1  ACTTTCTCTCTACAGCGCTGGGGCATCCACCTCTGCCCTAGGGTGCCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTCTCTACAGCGCTGGGGCATCCACCTCTGCCCTAGGGTGCCCTT  200

seq1  CCCAGGCTCTTGATTGGGAGACTTTTAATGATTGCATCTATTTCCTTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCTCTTGATTGGGAGACTTTTAATGATTGCATCTATTTCCTTAGA  250

seq1  GGCTATGGGACTGTTTACATAGTTTATGTGGTCCTGATTTATGTTTGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGGGACTGTTTACATAGTTTATGTGGTCCTGATTTATGTTTGGTA  300

seq1  CCTAACAAAACCTGATTTATGTTTTGTACCTAAAACATTGTCCATTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACAAAACCTGATTTATGTTTTGTACCTAAAACATTGTCCATTTCAT  350

seq1  CTAGATTTTCTAGTTTTGTTGAGTATAGGCTTTTGTAGTAGGATCTGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTTTCTAGTTTTGTTGAGTATAGGCTTTTGTAGTAGGATCTGATA  400

seq1  ATTTTTTTGAATTTCCTCAATTTTTTGTTGTTATGTCTCTCTTTTCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTGAATTTCCTCAATTTTTTGTTGTTATGTCTCTCTTTTCATTT  450

seq1  CTGATTTGTTAATTTGGATACTGTCTCTGTGCTCTTTATTTAGTTTGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTGTTAATTTGGATACTGTCTCTGTGCTCTTTATTTAGTTTGGCT  500

seq1  AAGTGTTTATCTATGTTGGTGATTTTCTCAAAGAACTGGCTCTTAGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTATCTATGTTGGTGATTTTCTCAAAGAACTGGCTCTTAGTTTT  550

seq1  GCAGATTTTTTTGTATAGTTCTCTTTATTTCTACTTGATGAACTTCAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATTTTTTTGTATAGTTCTCTTTATTTCTACTTGATGAACTTCAGTC  600

seq1  CTGAGTTTGATTATTTCCTGCATCTACTCCTCTTGGGTGGATTTGCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTTGATTATTTCCTGCATCTACTCCTCTTGGGTGGATTTGCTTCT  650

seq1  TTCTGTTCTAGAGCATTCAGATGTGCTGTTCAGATGATAATACAAGCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTCTAGAGCATTCAGATGTGCTGTTCAGATGATAATACAAGCTCT  700

seq1  TGCTAA  706
      ||||||
seq2  TGCTAA  706