BAC Information

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BAC

Clone NameB6Ng01-284L23
Chromosome10 (Build37)
Map Location 104,354,172 - 104,510,333
singlet/doubletdoublet
Overlap geneLOC100042383
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneTmtc2, EG627573, BC067068, Ccdc59, EG667758
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284L23.bB6Ng01-284L23.g
ACCGA083373GA083374
length905922
definitionB6Ng01-284L23.b B6Ng01-284L23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,354,172 - 104,355,063)(104,509,413 - 104,510,333)
sequence
gaattccagatagtttttagtttctttctttacttctttatttcttccct
gacaaaatgatcattaataagagcgttgctcattttccatgagtatgtag
tctttctgttgtttctgttgttgttgttgaagtctggctttattccatga
tggtctgataagatacaaggggttattacaaccttattttacttgttgat
gcttgccttgtggtcttatatattgtcagttttaaagaaggttccatgaa
gtggtgagggtaaggtatattcttttgtgtttgtttgtttgtttgtttat
tggagaaaggttctgtatctatctgttaggtccatttggttcataacatg
ttagtcacagaaagcctctaaatgcagtaaaatgttaaataacatggcat
gtgcaagatcttgtagcactcatccctaaatagatgtctccatcctatct
attccctcaagagtaaggaatctatattttagaggaggcagaaagtatgc
ctctatggaatcagcttttattccatttaaatttaagtataaatgctgag
tagatgattttataaatgaagtgcctgctgagcaagaatgaagactagaa
atctgaccccaagaaagcatgtaaatgcaagcattgcgtggtaacataac
tgtaaagccaagacctagaaggatctagataggggagggcaggccagtta
actttgataggctagcttcaggttcagccatcgaatccttacctcaattc
tatgataacacggagagaaatagagtgaaaccccgaacctcacgttggaa
cttctacacacatgttgtatctcatgccatgcacatgtgaacacatacac
gttataccatatacaaaacagccaaatccaaatatataattttgacattt
aattt

gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagaacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgatatagttaaaccttttaatgggtgattcactttaca
agcaaaggaaagaaaaagaaatttggagctagttggacttttctaataaa
cagagggtcacataaacattagtgtggcacattttgttgaaggataatga
acagtgaatatgacctagaatttaattttgtactaaatgtagctgggtcc
tagcaagtgaggtatttttcccccttatttatgtttcaagtgtaaatgtt
tccttcaccttgttttatgagggagttccacaatccactcacccactact
acctccccaccttcgaattcccctacactgaggcattgagccttcacagg
accaaggccctctccttccactgatgccagacaaggccatcctctgctat
atatacagctggagccatggctccctccatgtgtaataatgtactctttg
gttgatggctaagtccctgggagctctgggggttctggttgtttgatatt
attgttcttttgtatgggggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104354172_104355063
seq2: B6Ng01-284L23.b_43_947

seq1  GAATTCCAGATAGTTTTTAGTTTCTTTCTTTACTTCTTTATTTCTTCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATAGTTTTTAGTTTCTTTCTTTACTTCTTTATTTCTTCCCT  50

seq1  GACAAAATGATCATTAATAAGAGCGTTGCTCATTTTCCATGAGTATGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAATGATCATTAATAAGAGCGTTGCTCATTTTCCATGAGTATGTAG  100

seq1  TCTTTCTGTTGTTTCTGTTGTTGTTGTTGAAGTCTGGCTTTATTCCATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGTTGTTTCTGTTGTTGTTGTTGAAGTCTGGCTTTATTCCATGA  150

seq1  TGGTCTGATAAGATACAAGGGGTTATTACAACCTTATTTTACTTGTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGATAAGATACAAGGGGTTATTACAACCTTATTTTACTTGTTGAT  200

seq1  GCTTGCCTTGTGGTCTTATATATTGTCAGTTTTAAAGAAGGTTCCATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCCTTGTGGTCTTATATATTGTCAGTTTTAAAGAAGGTTCCATGAA  250

seq1  GTGGTGAGGGTAAGGTATATTCTTTTGTGTTTGTTTGTTTGTTTGTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGAGGGTAAGGTATATTCTTTTGTGTTTGTTTGTTTGTTTGTTTAT  300

seq1  TGGAGAAAGGTTCTGTATCTATCTGTTAGGTCCATTTGGTTCATAACATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAAGGTTCTGTATCTATCTGTTAGGTCCATTTGGTTCATAACATG  350

seq1  TTAGTCACAGAAAGCCTCTAAATGCAGTAAAATGTTAAATAACATGGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCACAGAAAGCCTCTAAATGCAGTAAAATGTTAAATAACATGGCAT  400

seq1  GTGCAAGATCTTGTAGCACTCATCCCTAAATAGATGTCTCCATCCTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAGATCTTGTAGCACTCATCCCTAAATAGATGTCTCCATCCTATCT  450

seq1  ATTCCCTCAAGAGTAAGGAATCTATATTTTAGAGGAGGCAGAAAGTATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTCAAGAGTAAGGAATCTATATTTTAGAGGAGGCAGAAAGTATGC  500

seq1  CTCTATGGAATCAGCTTTTATTCCATTTAAATTTAAGTATAAATGCTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGGAATCAGCTTTTATTCCATTTAAATTTAAGTATAAATGCTGAG  550

seq1  TAGATGATTTTATAAATGAAGTGCCTGCTGAGCAAGAATGAAGACTAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGATTTTATAAATGAAGTGCCTGCTGAGCAAGAATGAAGACTAGAA  600

seq1  ATCTGACCCCAAGAAAGCATGTAAATGCAAGCATTGCGTGGTAACATAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACCCCAAGAAAGCATGTAAATGCAAGCATTGCGTGGTAACATAAC  650

seq1  TGTAAAGCCAAGACCTAGAAGGATCTAGATAGGGGAGGGCAGGCCAGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGCCAAGACCTAGAAGGATCTAGATAGGGGAGGGCAGGCCAGTTA  700

seq1  AC-TTGATAGGCTAGCTTCAGGTTCAGCCATCG-ATCC-TACCTCAA-TC  746
      || |||||||||||||||||||||||||||||| |||| |||||||| ||
seq2  ACTTTGATAGGCTAGCTTCAGGTTCAGCCATCGAATCCTTACCTCAATTC  750

seq1  TATGATAACACGGAGAGAAATAGAGTGAAACCCCGAACCTCACGTTGGAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAACACGGAGAGAAATAGAGTGAAACCCCGAACCTCACGTTGGAA  800

seq1  CTTCTACACACATGTTG-ATCCCATGCCATGCACATGTGAACACATACAC  845
      ||||||||||||||||| ||| ||||||||||||||||||||||||||||
seq2  CTTCTACACACATGTTGTATCTCATGCCATGCACATGTGAACACATACAC  850

seq1  G-TATACCATATAC-AAACAGCC-AATCCAAATATATAATTTTG-----T  887
      | |||||||||||| |||||||| ||||||||||||||||||||     |
seq2  GTTATACCATATACAAAACAGCCAAATCCAAATATATAATTTTGACATTT  900

seq1  AATTT  892
      |||||
seq2  AATTT  905


seq1: chr10_104509413_104510333
seq2: B6Ng01-284L23.g_67_988 (reverse)

seq1  AACCCCCATAC-AAAGAACAATAATATCAAACAACCAGAACCCCCAGAGC  49
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCATACAAAAGAACAATAATATCAAACAACCAGAACCCCCAGAGC  50

seq1  TCCCAGGGACTTAGCCATCAACCAAAGAGTACATTATTACACATGGAGGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGACTTAGCCATCAACCAAAGAGTACATTATTACACATGGAGGG  100

seq1  AGCCATGGCTCCAGCTGTATATATAGCAGAGGATGGCCTTGTCTGGCATC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGGCTCCAGCTGTATATATAGCAGAGGATGGCCTTGTCTGGCATC  150

seq1  AGTGGAAGGAGAGGGCCTTGGTCCTGTGAAGGCTCAATGCCTCAGTGTAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAGGAGAGGGCCTTGGTCCTGTGAAGGCTCAATGCCTCAGTGTAG  200

seq1  GGGAATTCGAAGGTGGGGAGGTAGTAGTGGGTGAGTGGATTGTGGAACTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTCGAAGGTGGGGAGGTAGTAGTGGGTGAGTGGATTGTGGAACTC  250

seq1  CCTCATAAAACAAGGTGAAGGAAACATTTACACTTGAAACATAAATAAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATAAAACAAGGTGAAGGAAACATTTACACTTGAAACATAAATAAGG  300

seq1  GGGAAAAATACCTCACTTGCTAGGACCCAGCTACATTTAGTACAAAATTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAATACCTCACTTGCTAGGACCCAGCTACATTTAGTACAAAATTA  350

seq1  AATTCTAGGTCATATTCACTGTTCATTATCCTTCAACAAAATGTGCCACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAGGTCATATTCACTGTTCATTATCCTTCAACAAAATGTGCCACA  400

seq1  CTAATGTTTATGTGACCCTCTGTTTATTAGAAAAGTCCAACTAGCTCCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTTTATGTGACCCTCTGTTTATTAGAAAAGTCCAACTAGCTCCAA  450

seq1  ATTTCTTTTTCTTTCCTTTGCTTGTAAAGTGAATCACCCATTAAAAGGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTTTCTTTCCTTTGCTTGTAAAGTGAATCACCCATTAAAAGGTT  500

seq1  TAACTATATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGT  550

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  600

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  650

seq1  CAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTTCTGTAAGATCG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTTCTGTAAGATCG  700

seq1  AGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  750

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  800

seq1  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  850

seq1  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGG  900

seq1  CTCAGAACTGAACAAAGAATTC  921
      ||||||||||||||||||||||
seq2  CTCAGAACTGAACAAAGAATTC  922


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