BAC Information

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BAC

Clone NameB6Ng01-286A12
Chromosome10 (Build37)
Map Location 14,262,306 - 14,356,790
singlet/doubletdoublet
Overlap geneGpr126, LOC100039409
Upstream genePex3, Deadc1, Aig1, EG666859, Hivep2, LOC100039571
Downstream geneVta1, D230044M03Rik, EG666904, Nmbr, LOC666917, LOC637043
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286A12.bB6Ng01-286A12.g
ACCGA084330GA084331
length404998
definitionB6Ng01-286A12.b B6Ng01-286A12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,356,381 - 14,356,790)(14,262,306 - 14,263,309)
sequence
ttgggaccatcctaatcttgctctactactgtcaaaataaacttttaaaa
tactttctattcttctgttaaatgtaaatagcactttttgaagtgtttgg
caaagtaaaattagcagttatcactgagtgccttgtatttctcagaaatt
ctttgtacaatttaaaagtccatttttccatctaaagtttgttttatttg
aaactcatttatttctgttgaagtgtttggtttttaatatattaaaatgt
gtattcctttctaacacaagaaaacacaactcatttgaaaactgagaata
taggtgtacagtaaggagctggcataatattcatgaagccctaagttcca
tctctagtgcaaggaaaggaagtggggaggagggaagagagagggaagga
gacg
gaattcttagttgggagttggtacagcccttaaatgtcatcatttccaca
gagcagtatacatgataatgtcatctagctttgacaaggcaatgatgtca
tccaactaggcctgaacatggaaatatatatcttgccacaaatactacac
actttctgtttagtctaagtatgagatagtctctagaaacttcttcattc
ctcagaaatgtaaattctatataatatgtggacagttagaaacatattgg
gttgaaagacattatcatctgtttatttttaatatataaatgacatttct
ctcattatttccagaaatcagagcgacatttcacttaggcagtaacaaat
atgggcttctaatacttcccataagctaacagacaatggtctcattcacc
attcacattggaaaggcacaatgtcatgtaacttataaaagccataaatg
gaacagtatcttcatgcagtgtgagacccacaaaggccagccttcctaaa
tctcctcaatttctcagagcatgaaaaacctgcaattgtaataactccta
aatatatttataaagtctgtaatctcaaaccatgagggtaacaatataca
agtttgttctacacaagaaagaccctgccaagacccttaagtagcctgcg
tatttttatttactgaaattaaaatttgaaaaatataatttgtctcccat
ttcaacgtttttaacaagataatagaaatattttccttgggtagcttggc
attatctccatgtagtctaacttggctaaaatgggttaagctgtctcaaa
caactgcacagaaaatacgcataaccatcttgaaagagagaaaatatttc
cagcaaaagaatttggtaaagaaatttaaatcaaggacaaaagctttgaa
tgattgttgctcatgactcaacctgagagacataaatttaatcacactta
atccaaattgcgagagtgtatcatactggtgatcagtagtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_14356381_14356790
seq2: B6Ng01-286A12.b_47_456 (reverse)

seq1  CGTCTCCTTCCCTCTCTCTTCCCTCCTCCCCACTTCCTTTCCTTGCACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCCTTCCCTCTCTCTTCCCTCCTCCCCACTTCCTTTCCTTGCACTA  50

seq1  GAGATGGAACTTAGGGCTTCATGAATATTATGCCAGCTCCTTACTGTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGAACTTAGGGCTTCATGAATATTATGCCAGCTCCTTACTGTACA  100

seq1  CCTATATTCTCAGTTTTCAAATGAGTTGTGTTTTCTTGTGTTAGAAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATATTCTCAGTTTTCAAATGAGTTGTGTTTTCTTGTGTTAGAAAGGA  150

seq1  ATACACATTTTAATATATTAAAAACCAAACACTTCAACAGAAATAAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACATTTTAATATATTAAAAACCAAACACTTCAACAGAAATAAATGA  200

seq1  GTTTCAAATAAAACAAACTTTAGATGGAAAAATGGACTTTTAAATTGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAAATAAAACAAACTTTAGATGGAAAAATGGACTTTTAAATTGTAC  250

seq1  AAAGAATTTCTGAGAAATACAAGGCACTCAGTGATAACTGCTAATTTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATTTCTGAGAAATACAAGGCACTCAGTGATAACTGCTAATTTTAC  300

seq1  TTTGCCAAACACTTCAAAAAGTGCTATTTACATTTAACAGAAGAATAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAAACACTTCAAAAAGTGCTATTTACATTTAACAGAAGAATAGAA  350

seq1  AGTATTTTAAAAGTTTATTTTGACAGTAGTAGAGCAAGATTAGGATGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTAAAAGTTTATTTTGACAGTAGTAGAGCAAGATTAGGATGGTC  400

seq1  CCAAGAATTC  410
      ||||||||||
seq2  CCAAGAATTC  410

seq1: chr10_14262306_14263309
seq2: B6Ng01-286A12.g_67_1064

seq1  GAATTCTTAGTTGGGAGTTGGTACAGCCCTTAAATGTCATCATTTCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGTTGGGAGTTGGTACAGCCCTTAAATGTCATCATTTCCACA  50

seq1  GAGCAGTATACATGATAATGTCATCTAGCTTTGACAAGGCAATGATGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTATACATGATAATGTCATCTAGCTTTGACAAGGCAATGATGTCA  100

seq1  TCCAACTAGGCCTGAACATGGAAATATATATCTTGCCACAAATACTACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTAGGCCTGAACATGGAAATATATATCTTGCCACAAATACTACAC  150

seq1  ACTTTCTGTTTAGTCTAAGTATGAGATAGTCTCTAGAAACTTCTTCATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTGTTTAGTCTAAGTATGAGATAGTCTCTAGAAACTTCTTCATTC  200

seq1  CTCAGAAATGTAAATTCTATATAATATGTGGACAGTTAGAAACATATTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAATGTAAATTCTATATAATATGTGGACAGTTAGAAACATATTGG  250

seq1  GTTGAAAGACATTATCATCTGTTTATTTTTAATATATAAATGACATTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAAGACATTATCATCTGTTTATTTTTAATATATAAATGACATTTCT  300

seq1  CTCATTATTTCCAGAAATCAGAGCGACATTTCACTTAGGCAGTAACAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTATTTCCAGAAATCAGAGCGACATTTCACTTAGGCAGTAACAAAT  350

seq1  ATGGGCTTCTAATACTTCCCATAAGCTAACAGACAATGGTCTCATTCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTTCTAATACTTCCCATAAGCTAACAGACAATGGTCTCATTCACC  400

seq1  ATTCACATTGGAAAGGCACAATGTCATGTAACTTATAAAAGCCATAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACATTGGAAAGGCACAATGTCATGTAACTTATAAAAGCCATAAATG  450

seq1  GAACAGTATCTTCATGCAGTGTGAGACCCACAAAGGCCAGCCTTCCTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTATCTTCATGCAGTGTGAGACCCACAAAGGCCAGCCTTCCTAAA  500

seq1  TCTCCTCAATTTCTCAGAGCATGAAAAACCTGCAATTGTAATAACTCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCAATTTCTCAGAGCATGAAAAACCTGCAATTGTAATAACTCCTA  550

seq1  AATATATTTATAAAGTCTGTAATCTCAAACCATGAGGGTAACAATATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTTATAAAGTCTGTAATCTCAAACCATGAGGGTAACAATATACA  600

seq1  AGTTTGTTCTACACAAGAAAGACCCTGCCAAGACCCTTAAGTAGCCTGCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTTCTACACAAGAAAGACCCTGCCAAGACCCTTAAGTAGCCTGCG  650

seq1  TATTTTTATTTACTGAAATTAAAATTTGAAAAATATAATTTGTCTCCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTATTTACTGAAATTAAAATTTGAAAAATATAATTTGTCTCCCAT  700

seq1  TTCAACGTTTTTAACAAGATAATAGAAATATTTTCCTTGGGTAGCTTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACGTTTTTAACAAGATAATAGAAATATTTTCCTTGGGTAGCTTGGC  750

seq1  ATTATCTCCATGTAGTCTAACTTGGCTAAAATGGGTTAAGCTGTCTCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTCCATGTAGTCTAACTTGGCTAAAATGGGTTAAGCTGTCTCAAA  800

seq1  CAACTGCACAGAAAATACGCATAACCATCTTGAAAGAGAGAAAATATTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCACAGAAAATACGCATAACCATCTTGAAAGAGAGAAAATATTTC  850

seq1  CAGCAAAAGAATTTGGTAAAGAAATTTAAATCAAGGACAAAAAGCTTTGA  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAGCAAAAGAATTTGGTAAAGAAATTTAAATCAAGGAC-AAAAGCTTTGA  899

seq1  ATGATTGTTTGCTCATGACTCAACCTGAGAAGACATAAATTTAATCACAC  950
      ||||||| ||||||||||||||||||||| ||||||||||||||||||||
seq2  ATGATTG-TTGCTCATGACTCAACCTGAG-AGACATAAATTTAATCACAC  947

seq1  TTAATCCAAATTGCGAGAGTGTTATCATTACTGGTTGATCAGTAGTGTGT  1000
      ||||||||||||||||||||| ||||| |||||| |||||||||||||||
seq2  TTAATCCAAATTGCGAGAGTG-TATCA-TACTGG-TGATCAGTAGTGTGT  994

seq1  GTGT  1004
      ||||
seq2  GTGT  998