BAC Information

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BAC

Clone NameB6Ng01-288I01
Chromosome10 (Build37)
Map Location 97,410,930 - 97,559,831
singlet/doubletdoublet
Overlap genenone
Upstream gene4930556N09Rik, EG667407, Dcn, Lum, Kera, Epyc, 4921510H08Rik
Downstream geneEG667438, EG432494, Atp2b1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288I01.bB6Ng01-288I01.g
ACCGA086147GA086148
length265996
definitionB6Ng01-288I01.b B6Ng01-288I01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,559,567 - 97,559,831)(97,410,930 - 97,411,913)
sequence
gaattcactggagaaatggaagagcctgcatttcagcaacacacactggt
ttccttccctcccatctcaggggtagactcttctctccaagtcacttcat
tctgtagtacgttcaaggagcaacatcatggatttttatctttattatac
cgtgaacaaacagaacttcattcctagccttttgtagagaaagatgaaca
atctgggacaaagatttccaattgtgtgtgtgggagagagagagagagag
agagagggagagaga
gaattcaaagggattccatgcttgtgttataaatcagttattaaacccca
tggctgaggatgtcatagactcctcagtgttgacagggatagaaggaaca
taagagggattgataggtgagagtaaccaaaatgctttatatacatgctt
gaaattctcaaacgacagtatcattaataaaaactacaaaacttaaacca
agcaaaaatatcccagaaaataaatgtaaatataatataatcaccaaaat
atagaaatactttagtgcgggcatgaatactgtcttgaaagtacagtttc
atccccaattactctaccaaacagatatgagtcaaattccatttaaaaat
ctcagataaaaatatcttgttccaaaaagtgttattgtaaagactcaaat
gattaagacaataaattaactatgggaaagctccaagtgtaatgaaagga
accatctgcacgatggctttcctgatgcctaagatttataatcaatgcag
tcatctcaaaaaacagatcaacttaataatctttctataaaagattgaat
agaagattccaaggagaagaagaagagatagcaaccacagaaaattcttc
agaccttattcttgattaaggaatcttaaaagagatagagagataatcaa
aaccatgtttctcaaccctcatccacaaagcgacattattataaagaaca
atgattcccttcttccaacaaaacagagagaaagcattacatacatgtga
cagttaaggaaactgatcatagatcatatagtggtcccatatctatgtat
gtttttctcccctttctctgaaaatgagggactgtagtagaaaatattcc
ttcttactgacctttgtgatgtttattattgtacaccacatcaaatcaaa
aattaaatttagaagtaaggaaagggaggggaaaaagggaaggaagaaag
gaaaggaagggaatggaaggaaggaaggaatggaagggaaggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97559567_97559831
seq2: B6Ng01-288I01.b_41_305 (reverse)

seq1  TCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCCCACACACACAATTGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCCCACACACACAATTGGAA  50

seq1  ATCTTTGTCCCAGATTGTTCATCTTTCTCTACAAAAGGCTAGGAATGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGTCCCAGATTGTTCATCTTTCTCTACAAAAGGCTAGGAATGAAG  100

seq1  TTCTGTTTGTTCACGGTATAATAAAGATAAAAATCCATGATGTTGCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTGTTCACGGTATAATAAAGATAAAAATCCATGATGTTGCTCCT  150

seq1  TGAACGTACTACAGAATGAAGTGACTTGGAGAGAAGAGTCTACCCCTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACGTACTACAGAATGAAGTGACTTGGAGAGAAGAGTCTACCCCTGAG  200

seq1  ATGGGAGGGAAGGAAACCAGTGTGTGTTGCTGAAATGCAGGCTCTTCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGGGAAGGAAACCAGTGTGTGTTGCTGAAATGCAGGCTCTTCCAT  250

seq1  TTCTCCAGTGAATTC  265
      |||||||||||||||
seq2  TTCTCCAGTGAATTC  265

seq1: chr10_97410930_97411913
seq2: B6Ng01-288I01.g_69_1064

seq1  GAATTCAAAGGGATTCCATGCTTGTGTTATAAATCAGTTATTAAACCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGGATTCCATGCTTGTGTTATAAATCAGTTATTAAACCCCA  50

seq1  TGGCTGAGGATGTCATAGACTCCTCAGTGTTGACAGGGATAGAAGGAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGAGGATGTCATAGACTCCTCAGTGTTGACAGGGATAGAAGGAACA  100

seq1  TAAGAGGGATTGATAGGTGAGAGTAACCAAAATGCTTTATATACATGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGGATTGATAGGTGAGAGTAACCAAAATGCTTTATATACATGCTT  150

seq1  GAAATTCTCAAACGACAGTATCATTAATAAAAACTACAAAACTTAAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCTCAAACGACAGTATCATTAATAAAAACTACAAAACTTAAACCA  200

seq1  AGCAAAAATATCCCAGAAAATAAATGTAAATATAATATAATCACCAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAATATCCCAGAAAATAAATGTAAATATAATATAATCACCAAAAT  250

seq1  ATAGAAATACTTTAGTGCGGGCATGAATACTGTCTTGAAAGTACAGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATACTTTAGTGCGGGCATGAATACTGTCTTGAAAGTACAGTTTC  300

seq1  ATCCCCAATTACTCTACCAAACAGATATGAGTCAAATTCCATTTAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAATTACTCTACCAAACAGATATGAGTCAAATTCCATTTAAAAAT  350

seq1  CTCAGATAAAAATATCTTGTTCCAAAAAGTGTTATTGTAAAGACTCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATAAAAATATCTTGTTCCAAAAAGTGTTATTGTAAAGACTCAAAT  400

seq1  GATTAAGACAATAAATTAACTATGGGAAAGCTCCAAGTGTAATGAAAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGACAATAAATTAACTATGGGAAAGCTCCAAGTGTAATGAAAGGA  450

seq1  ACCATCTGCACGATGGCTTTCCTGATGCCTAAGATTTATAATCAATGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTGCACGATGGCTTTCCTGATGCCTAAGATTTATAATCAATGCAG  500

seq1  TCATCTCAAAAAACAGATCAACTTAATAATCTTTCTATAAAAGATTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCAAAAAACAGATCAACTTAATAATCTTTCTATAAAAGATTGAAT  550

seq1  AGAAGATTCCAAGGAGAAGAAGAAGAGATAGCAACCACAGAAAATTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATTCCAAGGAGAAGAAGAAGAGATAGCAACCACAGAAAATTCTTC  600

seq1  AGACCTTATTCTTGATTAAGGAATCTTAAAAGAGATAGAGAGATAATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTATTCTTGATTAAGGAATCTTAAAAGAGATAGAGAGATAATCAA  650

seq1  AACCATGTTTCTCAACCCTCATCCACAAAGCGACATTATTATAAAGAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGTTTCTCAACCCTCATCCACAAAGCGACATTATTATAAAGAACA  700

seq1  ATGATTCCCTTCTTCCAACAAAACAGAGAGAAAGCATTACATACATGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCCCTTCTTCCAACAAAACAGAGAGAAAGCATTACATACATGTGA  750

seq1  CAGTTAAGGAAACTGATCATAGATCATATAGTGGTCCCATATCTATGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAAGGAAACTGATCATAGATCATATAGTGGTCCCATATCTATGTAT  800

seq1  GTTTTTCTCCCCTTTCTCTGAAAATGAGGGACTGTAGTAGAAAATATTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCTCCCCTTTCTCTGAAAATGAGGGACTGTAGTAGAAAATATTCC  850

seq1  TTCTTACTGACCTTTGTGATGTT--ATATTGTACACCACATCAAATCAAA  898
      |||||||||||||||||||||||   ||||||||||||||||||||||||
seq2  TTCTTACTGACCTTTGTGATGTTTATTATTGTACACCACATCAAATCAAA  900

seq1  AAT--AAATTAGAAGT-AGGAAA-GGAGGGGAAAAA-GGAAGGAAGAAAG  943
      |||  || |||||||| |||||| |||||||||||| |||||||||||||
seq2  AATTAAATTTAGAAGTAAGGAAAGGGAGGGGAAAAAGGGAAGGAAGAAAG  950

seq1  G-AAGGAAGG--AAGGAAGGAAGGAAGGAA-GGAA-GGAAGGAAGG  984
      | ||||||||  | |||||||||||||||| |||| ||||||||||
seq2  GAAAGGAAGGGAATGGAAGGAAGGAAGGAATGGAAGGGAAGGAAGG  996