MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-290C03
Chromosome	10 (Build37)
Map Location	52,806,854 - 52,807,190
singlet/doublet	singlet
Overlap gene	Slc35f1
Upstream gene	Ros1, Dcbld1, Gopc, LOC625811, EG668294, Nepn, D10Ertd438e, EG629689, Zfa
Downstream gene	Pln, EG432460, Mcm9, Asf1a, LOC100042554, 4930589M24Rik, Man1a
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ros1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19886 MGI:97999
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dcbld1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66686 MGI:1913936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gopc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94221 MGI:2149946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625811 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 117 ESTs, 8 Proteins pseudo : _no_value

name	EG668294 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668294 MGI:3645086
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins pseudo : _no_value

name	Nepn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66650 MGI:1913900
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D10Ertd438e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52014 MGI:1196365
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG629689 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629689 MGI:3644596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Zfa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22639 MGI:99153
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc35f1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215085 MGI:2139810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pln (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18821 MGI:97622
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG432460 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432460 MGI:3643175
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 46 ESTs, 3 Proteins

name	Mcm9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71567 MGI:1918817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asf1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66403 MGI:1913653
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042554 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	4930589M24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75906 MGI:1923156
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Man1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17155 MGI:104677
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ros1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326509 GeneID:19886 MGI:97999
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ros1 proto-oncogene transcript_id : NM_011282.2

name	Dcbld1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371872 GeneID:66686 MGI:1913936
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : discoidin, CUB and LCCL domain containing 1 transcript_id : NM_025705.2

name	Gopc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543484 GeneID:94221 MGI:2149946
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : golgi associated PDZ and coiled-coil motif containing transcript_id : NM_053187.2

name	Nepn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359018 GeneID:66650 MGI:1913900
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nephrocan transcript_id : NM_025684.2

name	D10Ertd438e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13384839 GeneID:52014 MGI:1196365
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 10, ERATO Doi 438, expressed transcript_id : NM_030250.1

name	EG629689 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82932618 GeneID:629689 MGI:3644596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG629689 transcript_id : XM_894604.1

name	Zfa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930732 GeneID:22639 MGI:99153
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein, autosomal transcript_id : NM_009540.3

name	Slc35f1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254331 GeneID:215085 MGI:2139810
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35, member F1 transcript_id : NM_178675.3

name	Pln (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560850 GeneID:18821 MGI:97622
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholamban transcript_id : NM_023129.3

name	EG432460 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388074 GeneID:432460 MGI:3643175
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 46 ESTs, 3 Proteins product : predicted gene, EG432460 transcript_id : XM_483898.4

name	Mcm9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86439952 GeneID:71567 MGI:1918817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : minichromosome maintenance complex component 9 transcript_id : NM_027830.2

name	Asf1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77020275 GeneID:66403 MGI:1913653
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ASF1 anti-silencing function 1 homolog A (S. cerevisiae) transcript_id : NM_025541.3

name	LOC100042554 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260762 GeneID:100042554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100042554 transcript_id : XM_001478420.1

name	4930589M24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487474 GeneID:75906 MGI:1923156
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930589M24 gene transcript_id : NM_001081428.1

name	Man1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802395 GeneID:17155 MGI:104677
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mannosidase 1, alpha transcript_id : NM_008548.3

name	Ros1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326510 CCDS:CCDS23838.1 GeneID:19886 MGI:97999
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : Ros1 proto-oncogene protein_id : NP_035412.2

name	Dcbld1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385162 CCDS:CCDS23839.1 GeneID:66686 MGI:1913936
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : discoidin, CUB and LCCL domain containing 1 protein_id : NP_079981.1

name	Gopc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543485 GeneID:94221 MGI:2149946
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS]; GO:0019717 - synaptosome [Evidence IDA] GO_function : GO:0042980 - cystic fibrosis transmembrane conductance regulator binding [Evidence ISS]; GO:0005478 - intracellular transporter activity [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0005083 - small GTPase regulator activity [Evidence IDA]; GO:0050430 - syntaxin-6 binding [Evidence ISS] GO_process : GO:0006914 - autophagy [Evidence IDA]; GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence ISS]; GO:0006893 - Golgi to plasma membrane transport [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : PDZ domain-containing protein PIST; PDZ protein interacting specifically with TC10 product : golgi associated PDZ and coiled-coil motif containing protein_id : NP_444417.2

name	Nepn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385148 CCDS:CCDS23840.1 GeneID:66650 MGI:1913900
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : nephrocan protein_id : NP_079960.1

name	D10Ertd438e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384840 CCDS:CCDS23841.1 GeneID:52014 MGI:1196365
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC52014 protein_id : NP_084526.1

name	EG629689 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82932619 GeneID:629689 MGI:3644596
definition	codon_start : 1 product : hypothetical protein protein_id : XP_899697.1

name	Zfa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113930733 CCDS:CCDS23842.1 GeneID:22639 MGI:99153
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : zinc finger protein ZFX; autosomal zinc finger protein product : zinc finger autosomal protein protein_id : NP_033566.3

name	Slc35f1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254332 CCDS:CCDS23843.1 GeneID:215085 MGI:2139810
definition	codon_start : 1 note : DUF6 containing protein product : solute carrier family 35, member F1 protein_id : NP_848790.2

name	Pln (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963503 GeneID:18821 MGI:97622
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0016529 - sarcoplasmic reticulum [Evidence IDA] GO_function : GO:0042030 - ATPase inhibitor activity [Evidence IEA]; GO:0005246 - calcium channel regulator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006874 - calcium ion homeostasis [Evidence IGI]; GO:0006816 - calcium ion transport [Evidence IEA]; GO:0002026 - cardiac inotropy [Evidence IGI]; GO:0048738 - cardiac muscle development [Evidence IGI]; GO:0045822 - negative regulation of heart contraction [Evidence IGI] codon_start : 1 product : phospholamban protein_id : NP_075618.1

name	EG432460 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51765614 GeneID:432460 MGI:3643175
definition	codon_start : 1 product : hypothetical protein protein_id : XP_483898.1

name	Mcm9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86439953 CCDS:CCDS23846.1 GeneID:71567 MGI:1918817
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0008094 - DNA-dependent ATPase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006270 - DNA replication initiation [Evidence IEA] codon_start : 1 note : mini-chromosome maintenance deficient 9; minichromosome maintenance deficient domain containing 1 product : minichromosome maintenance complex component 9 protein_id : NP_082106.2

name	Asf1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384964 CCDS:CCDS23847.1 GeneID:66403 MGI:1913653
definition	GO_component : GO:0016585 - chromatin remodeling complex [Evidence ISS] GO_function : GO:0042393 - histone binding [Evidence ISS] GO_process : GO:0006281 - DNA repair [Evidence ISS]; GO:0006334 - nucleosome assembly [Evidence ISS] codon_start : 1 product : ASF1 anti-silencing function 1 homolog A protein_id : NP_079817.1

name	LOC100042554 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260763 GeneID:100042554
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478470.1

name	4930589M24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487475 GeneID:75906 MGI:1923156
definition	codon_start : 1 product : hypothetical protein LOC75906 protein_id : NP_001074897.1

name	Man1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678788 CCDS:CCDS23848.1 GeneID:17155 MGI:104677
definition	GO_component : GO:0000139 - Golgi membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO:0004571 - mannosyl-oligosaccharide 1,2-alpha-mannosidase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : mannosyl-oligosaccharide alpha-1,2-mannosidase product : mannosidase, alpha, class 1A, member 1 protein_id : NP_032574.1

name	LOC625811 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260760 GeneID:625811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 117 ESTs, 8 Proteins product : similar to EWS pseudo : _no_value transcript_id : XR_033621.1

name	EG668294 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149260761 GeneID:668294 MGI:3645086
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins product : predicted gene, EG668294 pseudo : _no_value transcript_id : XR_033626.1

clone name	MSMg01-509G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122F13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-236F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344I15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-102I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051E06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-290C03.b	B6Ng01-290C03.g
ACC	GA087350	GA087351
length	1,169	337
definition	B6Ng01-290C03.b	B6Ng01-290C03.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca gaaaactggatatagtactaccagaggatccagcaatacctctcctgggc atatatccagaagatgccccaactggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaggaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa ggaactcacaatatgtactcactgattagtggatattagcccaaaaccta ggatatccaagatataagatacaatttcctaaacacatgaaactcaagaa aaatgaagactgaagtgtggacactatgcccctccttagaagtgggaaca aaacctccttggaaggaggtacagagacaaagtttggagctgagataaaa agatggaccatgtagagactgccatatccggggatccatcccataatcag cttccaaatgctgacaccattgcatacactagcaagattatgctgaaagg accctgatatagctgtctcttgtcagagtatgcctgggcctatcaaacat agacgtggatgctcacagtcggctattggatggatcacatgggccccatt gaaggagctaggagaaagtaccagaagctaaagggatctgcacctattgg tggaacaacattatgactacagtatccggagctctgactctagcctgcat atgtatcaaagatggctagtccgcatcactggtaagagaaggccaattga acacgccaaccttttatatgccccagtaggagctatgacaaaaaggaatg gtgctatgggtgaatgttc	actgaaaaagaaagtgactgcaaagcattagaaatcaccagtccaccgaa ggatatgatttaccagataagaagacagaaagtttggaatcgagaacttg tgaacacagtcatcctatgatctaaatcaacagtgcccaaggcagtgagg caggcaggcaggcaggcagacagacagggagacaaaatgacaggtagaca ggcaggcaggcagacagacaggcaggcaggcggatggagggactgagggg gcagggaaagagagaaagaaggaagaaatgaagggaaaagaagtgaaaaa agaaagaaggaaggaagggagggagggagggagggag
quality values	Open. Hide. 58 34 39 35 58 62 62 39 28 62 62 62 62 41 39 62 47 32 32 56 47 62 62 62 62 62 62 62 62 62 41 59 25 29 34 28 34 33 46 59 59 59 59 62 62 62 62 54 59 59 62 62 59 59 62 62 62 54 54 62 62 62 62 62 62 59 62 62 59 59 62 62 59 59 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 62 54 62 62 54 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 43 62 62 62 62 62 62 62 62 62 54 62 62 62 62 58 42 54 58 58 54 58 58 58 58 58 58 58 58 58 45 54 58 58 58 41 49 54 58 54 58 54 58 58 58 58 58 52 58 54 58 54 45 58 58 54 54 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 52 58 58 58 54 51 58 54 58 54 58 58 53 42 54 45 58 58 58 58 58 58 49 58 58 49 49 58 58 58 35 58 42 41 49 51 58 45 40 58 48 49 34 49 50 52 58 53 54 40 49 50 50 51 54 58 58 47 58 53 53 58 51 52 49 58 52 58 58 58 58 58 50 58 58 42 50 51 58 58 58 58 49 47 51 54 54 37 51 32 50 58 49 58 50 53 54 53 58 58 47 31 52 54 49 50 49 58 58 31 31 41 43 37 50 43 49 49 31 58 53 32 52 43 31 39 38 50 36 47 58 58 50 40 58 52 50 51 52 40 49 51 32 47 30 54 51 30 49 35 33 41 39 50 49 30 37 53 29 54 41 42 53 54 53 53 51 51 31 44 52 52 54 31 37 42 29 54 54 54 54 53 32 29 52 51 31 40 38 35 40 51 53 52 33 53 53 35 37 38 53 26 51 31 53 40 41 41 51 25 52 46 47 26 33 32 47 26 53 36 51 36 31 53 41 40 34 32 34 43 45 53 39 32 34 23 49 34 32 45 31 45 45 31 31 36 32 46 30 32 29 33 31 31 45 25 31 30 41 37 36 23 37 26 35 31 20 12 31 37 32 33 31 42 30 41 47 32 31 43 27 10 46 32 32 31 33 29 25 32 28 31 32 42 32 31 28 32 42 31 41 32 23 29 27 24 46 22 34 30 31 36 38 31 31 23 47 26 26 32 30 31 35 31 31 46 31 18 21 32 32 25 29 33 32 26 27 25 29 23 31 22 25 32 32 35 34 25 32 19 15 13 13 34 27 22 21 18 25 5 8 26 32 22 32 24 21 23 19 21 9 43 7 13 34 34 29 20 17 21 21 17 23 19 23 29 11 32 27 22 15 6 11 10 25 40 19 18 32 24 22 6 4 4 17 21 11 21 28 15 30 13 15 40 15 9 22 24 27 28 15 17 9 17 14 22 14 24 11 21 10 16 18 19 6 5 3 20 17 13 18 14 24 27 12 34 6 6 11 4 3 10 13 16 16 21 15 3 6 25 8 18 7 5 6 9 13 6 6 4 5 12 12 7 7 23 15 10 4 10 7 20 21 16 16 21 10 18 17 9 8 19 7 11 13 3 3 11 5 7 7 4 3 3 5 22 8 5 6 8 10 2 1 4 15 10 11 7 12 21 5 13 3 10 4 5 7 7 9 7 8 7 8 5 5 14 6 7 15 5 6 17 17 8 7 4 7 7 11 6 10 20 24 16 9 5 3 2 3 3 3 2 3 3 2 1 3 5 12 7 17 28 17 9 2 9 3 13 8 12 10 5 3 2 3 3 1 15 22 12 7 4 3 3 4 1 2 1 3	Open. Hide. 41 59 62 59 32 30 29 27 27 25 28 28 28 45 46 54 33 29 54 62 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 59 59 62 59 62 59 62 62 62 59 59 62 59 54 20 54 62 59 62 54 59 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 59 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 59 54 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 43 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 46 46 49 54 62 62 62 54 62 62 35 47 62 62 24 10

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_52806854_52807190
seq2: B6Ng01-290C03.g_73_409

seq1  ACTGAAAAAGAAAGTGACTGCAAAGCATTAGAAATCACCAGTCCACCGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAAAAGAAAGTGACTGCAAAGCATTAGAAATCACCAGTCCACCGAA  50

seq1  GGATATGATTTACCAGATAAGAAGACAGAAAGTTTGGAATCGAGAACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGATTTACCAGATAAGAAGACAGAAAGTTTGGAATCGAGAACTTG  100

seq1  TGAACACAGTCATCCTATGATCTAAATCAACAGTGCCCAAGGCAGTGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACAGTCATCCTATGATCTAAATCAACAGTGCCCAAGGCAGTGAGG  150

seq1  CAGGCAGGCAGGCAGGCAGACAGACAGGGAGACAAAATGACAGGTAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGGCAGGCAGGCAGACAGACAGGGAGACAAAATGACAGGTAGACA  200

seq1  GGCAGGCAGGCAGACAGACAGGCAGGCAGGCGGATGGAGGGACTGAGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCAGGCAGACAGACAGGCAGGCAGGCGGATGGAGGGACTGAGGGG  250

seq1  GCAGGGAAAGAGAGAAAGAAGGAAGAAATGAAGGGAAAAGAAGTGAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGAAAGAGAGAAAGAAGGAAGAAATGAAGGGAAAAGAAGTGAAAAA  300

seq1  AGAAAGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAG  337
      |||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAG  337

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information