BAC Information

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BAC

Clone NameB6Ng01-292B13
Chromosome10 (Build37)
Map Location 25,673,285 - 25,814,209
singlet/doubletdoublet
Overlap geneC030003D03Rik, LOC100040851
Upstream geneEG667479, LOC212399, Akap7, LOC665800, Epb4.1l2, 2010003K15Rik, EG667513, LOC667519, LOC628697
Downstream geneLOC15352, Samd3, L3mbtl3, LOC435208, LOC667572, LOC100040349, Arhgap18, Lama2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292B13.bB6Ng01-292B13.g
ACCGA088820GA088821
length997391
definitionB6Ng01-292B13.b B6Ng01-292B13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,813,227 - 25,814,209)(25,673,285 - 25,673,681)
sequence
gaattctactgcctcaacctctagagcagctagcataacagtcatatatc
attgcatctaatctgccctttcttttgtttatatttttataatcctttta
tttgttaaaaatgatattatctgctgtcttaagtgccttttaattattta
tatgccagctaggttaaaaatgccttttggggaagaaaggggtggggggg
aacaggaagagttggaagacacattctagagaggttagagtaactggcct
aaaaaccctacagtcacagaagcagaaagccagcacattcacagcgcagg
ctgttaactctctcttggacatctgttctttaaaagtgagccatgataga
gtcacaattctctaggaattgaactgctgagaactggaggtttactttta
gagactctggcctccccaggaatcattgggactcatgtgatctccagaac
tacactctgcaccccagagttcaccaggtgaaggccccaaaggctacaaa
tggccaagcatgatgcaatctctcctagtgacacatgctaataagcatga
aagacatctacaattcttccccgatcccagttctccttgttgtacaggta
tctccacagcactaaaagggcaaatgagagctatggtgctcaacacagtg
ttaggaaataccatgttgttaaaaaaaaaaaaaacaaacaaactaactgc
taaacccaccagagagtgaaggagaccctttaaaaggcctgggatccatc
caagaaacaagagacaagagcatgttggcaggcacaggaacagaggagca
gtatgacccagagaggcaagaaagaaaagagcaaggtcaaaaatgtatga
gaagaagcagaagactcttcaccctggaggcatttacagaaacattctca
aggggaggcacgggacagcattgacccagtagaatattttgaggaggagc
ttcagttgatttatgtctattaaagccctaaattgtgtcttcctccg
tgtacacgcccaatcgtctcatcatgcatgtaaagcacttgctgtccagt
caggtgtgaaagccagaaaaactccgaaaagaagcagaagctagagctgg
cggtcagtgtaatccgtgaagtgacagaactttttaaagcaagggtttga
aaacgtgaagaatcaaggatcatgtagacaaccttaaagtgaaggttggg
tctagaactaactcgattgcctgctcacaccagcatctccctccacaggg
atgtccaggctgtaggagggagaagtgggcagctttatagaaatgggatg
ctgagccagaacggaaaaggaggcagtgggaggacttggcaggtgggaag
ggaaggagaacgacagagaatgagggagagggagggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_25813227_25814209
seq2: B6Ng01-292B13.b_51_1047 (reverse)

seq1  CGGA-GAAGACACAATT--GGGCTTTAATAGACATAAATC-ACTG-AGCT  45
      |||| ||||||||||||  ||||||||||||||||||||| |||| ||||
seq2  CGGAGGAAGACACAATTTAGGGCTTTAATAGACATAAATCAACTGAAGCT  50

seq1  -CTCTTC-AAATA-TCTACTGGGTC-ATGCTGTCCCGTGCCT-CCCTTGA  90
       ||| || ||||| ||||||||||| |||||||||||||||| |||||||
seq2  CCTCCTCAAAATATTCTACTGGGTCAATGCTGTCCCGTGCCTCCCCTTGA  100

seq1  G-ATGTTTCTGTAAATGCCTCCAGGGTG-AGAGTCTTCTGCTTCTTCTCA  138
      | |||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAATGTTTCTGTAAATGCCTCCAGGGTGAAGAGTCTTCTGCTTCTTCTCA  150

seq1  TACATTTTTGACCTTGCTCTTTTCTTTCTTGCCTCTCTGGGTCATACTGC  188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTTGACCTTGCTCTTTTCTTTCTTGCCTCTCTGGGTCATACTGC  200

seq1  TCCTCTGTTCCTGTGCCTGCC-ACATGCTCTTGTCTCTTGTTTCTTGGAT  237
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCCTCTGTTCCTGTGCCTGCCAACATGCTCTTGTCTCTTGTTTCTTGGAT  250

seq1  GGATCCCAGGCCTTTT-AAGGGTCTCCTTCACTCTCTGGTGGGTTTAGCA  286
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGATCCCAGGCCTTTTAAAGGGTCTCCTTCACTCTCTGGTGGGTTTAGCA  300

seq1  GTTAGTTTGTTTGTTTTTTTTTTTTTTAACAACATGGTATTTCCTAACAC  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTTTGTTTGTTTTTTTTTTTTTTAACAACATGGTATTTCCTAACAC  350

seq1  TGTGTTGAGCACCATAGCTCTCATTTGCCCTTTTAGTGCTGTGGAGATAC  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGAGCACCATAGCTCTCATTTGCCCTTTTAGTGCTGTGGAGATAC  400

seq1  CTGTACAACAAGGAGAACTGGGATCGGGGAAGAATTGTAGATGTCTTTCA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACAACAAGGAGAACTGGGATCGGGGAAGAATTGTAGATGTCTTTCA  450

seq1  TGCTTATTAGCATGTGTCACTAGGAGAGATTGCATCATGCTTGGCCATTT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATTAGCATGTGTCACTAGGAGAGATTGCATCATGCTTGGCCATTT  500

seq1  GTAGCCTTTGGGGCCTTCACCTGGTGAACTCTGGGGTGCAGAGTGTAGTT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTTTGGGGCCTTCACCTGGTGAACTCTGGGGTGCAGAGTGTAGTT  550

seq1  CTGGAGATCACATGAGTCCCAATGATTCCTGGGGAGGCCAGAGTCTCTAA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGATCACATGAGTCCCAATGATTCCTGGGGAGGCCAGAGTCTCTAA  600

seq1  AAGTAAACCTCCAGTTCTCAGCAGTTCAATTCCTAGAGAATTGTGACTCT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAACCTCCAGTTCTCAGCAGTTCAATTCCTAGAGAATTGTGACTCT  650

seq1  ATCATGGCTCACTTTTAAAGAACAGATGTCCAAGAGAGAGTTAACAGCCT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGCTCACTTTTAAAGAACAGATGTCCAAGAGAGAGTTAACAGCCT  700

seq1  GCGCTGTGAATGTGCTGGCTTTCTGCTTCTGTGACTGTAGGGTTTTTAGG  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTGTGAATGTGCTGGCTTTCTGCTTCTGTGACTGTAGGGTTTTTAGG  750

seq1  CCAGTTACTCTAACCTCTCTAGAATGTGTCTTCCAACTCTTCCTGTTCCC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTACTCTAACCTCTCTAGAATGTGTCTTCCAACTCTTCCTGTTCCC  800

seq1  CCCCACCCCTTTCTTCCCCAAAAGGCATTTTTAACCTAGCTGGCATATAA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCTTTCTTCCCCAAAAGGCATTTTTAACCTAGCTGGCATATAA  850

seq1  ATAATTAAAAGGCACTTAAGACAGCAGATAATATCATTTTTAACAAATAA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAAAAGGCACTTAAGACAGCAGATAATATCATTTTTAACAAATAA  900

seq1  AAGGATTATAAAAATATAAACAAAAGAAAGGGCAGATTAGATGCAATGAT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTATAAAAATATAAACAAAAGAAAGGGCAGATTAGATGCAATGAT  950

seq1  ATATGACTGTTATGCTAGCTGCTCTAGAGGTTGAGGCAGTAGAATTC  983
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACTGTTATGCTAGCTGCTCTAGAGGTTGAGGCAGTAGAATTC  997

seq1: chr10_25673285_25673681
seq2: B6Ng01-292B13.g_63_459

seq1  GAATTCTGTACACGCCCAATCGTCTCATCATGCATGTAAAGCACTTGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTACACGCCCAATCGTCTCATCATGCATGTAAAGCACTTGCTG  50

seq1  TCCAGTCAGGTGTGAAAGCCAGAAAAACTCCGAAAAGAAGCAGAAGCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCAGGTGTGAAAGCCAGAAAAACTCCGAAAAGAAGCAGAAGCTAG  100

seq1  AGCTGGCGGTCAGTGTAATCCGTGAAGTGACAGAACTTTTTAAAGCAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCGGTCAGTGTAATCCGTGAAGTGACAGAACTTTTTAAAGCAAGG  150

seq1  GTTTGAAAACGTGAAGAATCAAGGATCATGTAGACAACCTTAAAGTGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAAACGTGAAGAATCAAGGATCATGTAGACAACCTTAAAGTGAAG  200

seq1  GTTGGGTCTAGAACTAACTCGATTGCCTGCTCACACCAGCATCTCCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGTCTAGAACTAACTCGATTGCCTGCTCACACCAGCATCTCCCTCC  250

seq1  ACAGGGATGTCCAGGCTGTAGGAGGGAGAAGTGGGCAGCTTTATAGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGATGTCCAGGCTGTAGGAGGGAGAAGTGGGCAGCTTTATAGAAAT  300

seq1  GGGATGCTGAGCCAGAACGGAAAAGGAGGCAGTGGGAGGACTTGGCAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCTGAGCCAGAACGGAAAAGGAGGCAGTGGGAGGACTTGGCAGGT  350

seq1  GGGAAGGGAAGGAGAACGACAGAGAATGAGGGAGAGGGAGGGGGAGG  397
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGGAAGGAGAACGACAGAGAATGAGGGAGAGGGAGGGGGAGG  397