BAC Information

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BAC

Clone NameB6Ng01-293C06
Chromosome10 (Build37)
Map Location 32,887,144 - 32,888,274
singlet/doubletsinglet
Overlap geneTrdn
Upstream geneTcba1, EG667761
Downstream geneA330019N05Rik, LOC100040686, EG215895, LOC100041399, Sult3a1, Rshl3, 2700019D07Rik, LOC672399, LOC666127, Rwdd1, 4732454E20Rik, BB146404, A630077B13Rik, Dse
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293C06.bB6Ng01-293C06.g
ACCGA089594GA089595
length7031,136
definitionB6Ng01-293C06.b B6Ng01-293C06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcagtaaagatatctggttctggtcttttttttcttccttcct
tttcttttctctttctttctttctttctttctttctttctttctttcttt
ctttcttccttccttccttccttccttcctctctctctctctctctctct
ctctctctctctctctctctctctctctctctctctctctctctctctct
ctctctctctttctttctgtgtgggggagtgactctctagcgcactatat
atatattcacgctagatgagactgggtgggtgtgagtgccaacttgacac
agctggagttagaaagtgtctgtctctctctttttcaaaatgactccggg
agattaaactgtcacgcatttttttatttatggatcaaaggggaaaagac
actttttggtgggaccatctctgggctggatatcttgtttctgtaagaaa
gcagaatatataagccatgggaagcttgcgagtatacaacataccaccat
agctcaacatgaaagagtgcgtgagagaggatctgacagagatcagtccg
gacttcctgagagatgaacagaagttagtatgtgtaagccaaatacacac
tttcctcaccacgtgcatcttgctcatgatgtttgtgcataaataacatt
gactaatgtctgagatttctgatctctatatgtgtgtttctttgagctag
tgt
gaattctattggactgcctatttgtaaggcatacttatctatttgtaaaa
acacaaaatacagatacagaaatttttaagaaattttctacactaacttt
tgaagatactgtaaagaagcagacaaatgggcttgtaacctagcctattg
cttgaaatattgacaacacctgaaaaaacaatattgaaagttaaatttga
tgactagctttatcacaggttatcagtgctctgtaataatgactatgaat
agagacagtataccatgttgtggtatgtggagtcctctcagaactctagg
gtgctgtaggaagctagacacctatatgccactatactcgtcttctcttt
ttgttttcctttaaaattgtagaatgcctttaaagactgcattcctgccc
atacttagaaggcacttaaaagttacatgtattgcaatgtaatgattaat
gcaaatgttgagctttaaaataaaattccagtgagaggaggctgttggcc
atgtgtctatcatctgagcatcatgaaagtagagatgggagcagcgatga
ggtcatgctcaactaaacagtaagaaatagtctaagaaaatttccagata
ttaaaatgtaaataaaattactgtgctactgcctttaaaacttaattaat
gatctctaagtgttaaatgttatatttgtaaaatataattttaaaaatac
tttttaacacatggaaatttctttcatattcttttcatctatactcaaag
aattttattgaatagcattagaatttaattttttgaaaatttaaagatta
catcataaattttacaaatatgtatatataataaattatttaatttattt
cctatagaacatcaagtatattaacctccatagataaaatatattgctaa
tatttatggttttgtattgaaaataaaatatcaaatactgtttccttatg
aggttaatgggactgtaaaattagatcacaagaaacttttaaagatgaat
cagcagtgagtgagcattaatgcttttacacaggatctagtttacttcca
agtacctgtgccagacagctcagaggctaagtataacttctagccttcag
agaatccagaaaaccctctttctcatctctaaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_32887144_32888274
seq2: B6Ng01-293C06.g_67_1202 (reverse)

seq1  ATCCTTAGAGATGAG-AAGAGGG-TTTCTG--ATCTCTTGAGGCTAG-AG  45
      ||||||||||||||| ||||||| ||||||   |||||  ||||||| ||
seq2  ATCCTTAGAGATGAGAAAGAGGGTTTTCTGGATTCTCTGAAGGCTAGAAG  50

seq1  TTATACTT-GCTTCTGAGCTGTCTGGCACAGGTACTTGGAAGTAAACTAG  94
      |||||||| || ||||||||||||||||||||||||||||||||||||||
seq2  TTATACTTAGCCTCTGAGCTGTCTGGCACAGGTACTTGGAAGTAAACTAG  100

seq1  ATTCCTGTGTAAAAGCATTTAATGCTCACTCACTGCTGATTCATCTTT-A  143
      | ||||||||||||||| |||||||||||||||||||||||||||||| |
seq2  A-TCCTGTGTAAAAGCA-TTAATGCTCACTCACTGCTGATTCATCTTTAA  148

seq1  AAGTTTCTTGTGATCTAATTTTACAGTCCCATTAACCTCATAAGGAAACA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCTTGTGATCTAATTTTACAGTCCCATTAACCTCATAAGGAAACA  198

seq1  GTATTTGATATTTTATTTTCAATACAAAACCATAAATATTAGCAATATAT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGATATTTTATTTTCAATACAAAACCATAAATATTAGCAATATAT  248

seq1  TTTATCTATGGAGGTTAATATACTTGATGTTCTATAGGAAATAAATTAAA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTATGGAGGTTAATATACTTGATGTTCTATAGGAAATAAATTAAA  298

seq1  TAATTTATTATATATACATATTTGTAAAATTTATGATGTAATCTTTAAAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATTATATATACATATTTGTAAAATTTATGATGTAATCTTTAAAT  348

seq1  TTTCAAAAAATTAAATTCTAATGCTATTCAATAAAATTCTTTGAGTATAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAAAATTAAATTCTAATGCTATTCAATAAAATTCTTTGAGTATAG  398

seq1  ATGAAAAGAATATGAAAGAAATTTCCATGTGTTAAAAAGTATTTTTAAAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGAATATGAAAGAAATTTCCATGTGTTAAAAAGTATTTTTAAAA  448

seq1  TTATATTTTACAAATATAACATTTAACACTTAGAGATCATTAATTAAGTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTACAAATATAACATTTAACACTTAGAGATCATTAATTAAGTT  498

seq1  TTAAAGGCAGTAGCACAGTAATTTTATTTACATTTTAATATCTGGAAATT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGCAGTAGCACAGTAATTTTATTTACATTTTAATATCTGGAAATT  548

seq1  TTCTTAGACTATTTCTTACTGTTTAGTTGAGCATGACCTCATCGCTGCTC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGACTATTTCTTACTGTTTAGTTGAGCATGACCTCATCGCTGCTC  598

seq1  CCATCTCTACTTTCATGATGCTCAGATGATAGACACATGGCCAACAGCCT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTACTTTCATGATGCTCAGATGATAGACACATGGCCAACAGCCT  648

seq1  CCTCTCACTGGAATTTTATTTTAAAGCTCAACATTTGCATTAATCATTAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCACTGGAATTTTATTTTAAAGCTCAACATTTGCATTAATCATTAC  698

seq1  ATTGCAATACATGTAACTTTTAAGTGCCTTCTAAGTATGGGCAGGAATGC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAATACATGTAACTTTTAAGTGCCTTCTAAGTATGGGCAGGAATGC  748

seq1  AGTCTTTAAAGGCATTCTACAATTTTAAAGGAAAACAAAAAGAGAAGACG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTAAAGGCATTCTACAATTTTAAAGGAAAACAAAAAGAGAAGACG  798

seq1  AGTATAGTGGCATATAGGTGTCTAGCTTCCTACAGCACCCTAGAGTTCTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGTGGCATATAGGTGTCTAGCTTCCTACAGCACCCTAGAGTTCTG  848

seq1  AGAGGACTCCACATACCACAACATGGTATACTGTCTCTATTCATAGTCAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACTCCACATACCACAACATGGTATACTGTCTCTATTCATAGTCAT  898

seq1  TATTACAGAGCACTGATAACCTGTGATAAAGCTAGTCATCAAATTTAACT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAGAGCACTGATAACCTGTGATAAAGCTAGTCATCAAATTTAACT  948

seq1  TTCAATATTGTTTTTTCAGGTGTTGTCAATATTTCAAGCAATAGGCTAGG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATATTGTTTTTTCAGGTGTTGTCAATATTTCAAGCAATAGGCTAGG  998

seq1  TTACAAGCCCATTTGTCTGCTTCTTTACAGTATCTTCAAAAGTTAGTGTA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGCCCATTTGTCTGCTTCTTTACAGTATCTTCAAAAGTTAGTGTA  1048

seq1  GAAAATTTCTTAAAAATTTCTGTATCTGTATTTTGTGTTTTTACAAATAG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTTCTTAAAAATTTCTGTATCTGTATTTTGTGTTTTTACAAATAG  1098

seq1  ATAAGTATGCCTTACAAATAGGCAGTCCAATAGAATTC  1131
      ||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTATGCCTTACAAATAGGCAGTCCAATAGAATTC  1136