BAC Information

Click to search

BAC

Clone NameB6Ng01-294P21
Chromosome10 (Build37)
Map Location 54,775,236 - 54,776,318
singlet/doubletsinglet
Overlap genenone
Upstream geneMan1a, LOC100041898
Downstream geneLOC382460, LOC100041927, D630037F22Rik
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294P21.bB6Ng01-294P21.g
ACCGA090977GA090978
length1,0751,163
definitionB6Ng01-294P21.b B6Ng01-294P21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctaatttaactagaattagaatatatctgcagtctgttcag
ccactataatgttacttgcatatatatgatttcagagctgaccattagct
attagataacctgttattggggaatagtttcctcactgataaagattatc
tctcctcctctgaaaattctttagatacctgtaattatctgggtaatgat
gaggcctcatgagtgcacttccttcttccttaacatgtctataagtatct
ttcttggcagattttgatttggtgagacttcctgagactagcttctgaca
gttctgaagaaaaagctcacaacaaacttatggcacttgaaatatttctc
ccccctcttctccatgatccccacgatttaggtgcaagagtcacattgca
gatgtttcagttgaatacaaaacaatgacttgctcactgcattttaattg
gttgtgatttttagtaatatctccatctattacacagagacatttctttg
atgaaactttaatcttcaacttatctgtgggtatggtataagtacctagt
atgcagttatgagttatgttcatttagtaaagtagatattgtagattctt
ctccaagatccatgacttcactatcgctgagtagttgtttaggtttccag
tagtagatatcttttgggtggcatcaagtcctccattgctggtgggatta
caagcttgtacaaccactctggaattcagtctggtggttccacagaatat
tggacatagtactaatggaaaatccagcaataactctcctgggcatatat
ccagaagatgttccaactggtaagaaagtcacatgctccactatgttcat
agcagccttatttataatagccagaagctggaaagaacccagatgcctct
caacagaggaatggttacagaaatgtgtacatttacacaatggagtacta
catagctattaaaaataattatttatgaaattcctggccaaatggatgac
ctgaggcatcatcttgagtgagtactaaatcacaaagaattccacacaat
atgtactcactgatagttgatatta
gaattcccacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatcctcaatcatcagggaatggcaaatcaaaacaaccctgagat
tccacctcacaccaggcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaactggacatagtactaccagaggatccagcaatacctcccctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gaaaactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgactgaggtaacacattcacaaa
ggaacttacacaatatgtactcactgataagtggaatttagcccaaaacc
tgggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagacttaagtgtggacactatgcccctccttagaagtgggaa
taaaacacccataaaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaaaattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgaaagggcctagcaagc
actgaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggagagctagagaaagacccaagagctaaagggatctgcacctatagt
ggacacatatgaattacagttacccggagctctgactctagctgcatatg
tatccaaaggataggcttagttgcatcacttggaaagagagtccatgaca
tgccaacttatctgctcagtcaggctacgcagcccaaaatgaggattgtc
ctatgcatatcgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_54775236_54776318
seq2: B6Ng01-294P21.b_46_1120

seq1  GAATTCACTCTAATTTAACTAGAATTAGAATATATCTGCAGTCTGTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTAATTTAACTAGAATTAGAATATATCTGCAGTCTGTTCAG  50

seq1  CCACTATAATGTTACTTGCATATATATGATTTCAGAGCTGACCATTAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATAATGTTACTTGCATATATATGATTTCAGAGCTGACCATTAGCT  100

seq1  ATTAGATAACCTGTTATTGGGGAATAGTTTCCTCACTGATAAAGATTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATAACCTGTTATTGGGGAATAGTTTCCTCACTGATAAAGATTATC  150

seq1  TCTCCTCCTCTGAAAATTCTTTAGATACCTGTAATTATCTGGGTAATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCTCTGAAAATTCTTTAGATACCTGTAATTATCTGGGTAATGAT  200

seq1  GAGGCCTCATGAGTGCACTTCCTTCTTCCTTAACATGTCTATAAGTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCTCATGAGTGCACTTCCTTCTTCCTTAACATGTCTATAAGTATCT  250

seq1  TTCTTGGCAGATTTTGATTTGGTGAGACTTCCTGAGACTAGCTTCTGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGCAGATTTTGATTTGGTGAGACTTCCTGAGACTAGCTTCTGACA  300

seq1  GTTCTGAAGAAAAAGCTCACAACAAACTTATGGCACTTGAAATATTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAAGAAAAAGCTCACAACAAACTTATGGCACTTGAAATATTTCTC  350

seq1  CCCCCTCTTCTCCATGATCCCCACGATTTAGGTGCAAGAGTCACATTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCTTCTCCATGATCCCCACGATTTAGGTGCAAGAGTCACATTGCA  400

seq1  GATGTTTCAGTTGAATACAAAACAATGACTTGCTCACTGCATTTTAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTCAGTTGAATACAAAACAATGACTTGCTCACTGCATTTTAATTG  450

seq1  GTTGTGATTTTTAGTAATATCTCCATCTATTACACAGAGACATTTCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGATTTTTAGTAATATCTCCATCTATTACACAGAGACATTTCTTTG  500

seq1  ATGAAACTTTAATCTTCAACTTATCTGTGGGTATGGTATAAGTACCTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACTTTAATCTTCAACTTATCTGTGGGTATGGTATAAGTACCTAGT  550

seq1  ATGCAGTTATGAGTTATGTTCATTTAGTAAAGTAGATATTGTAGATTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTTATGAGTTATGTTCATTTAGTAAAGTAGATATTGTAGATTCTT  600

seq1  CTCCAAGATCCATGACTTCACTATCGCTGAGTAGTTGTTTAGGTTTCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGATCCATGACTTCACTATCGCTGAGTAGTTGTTTAGGTTTCCAG  650

seq1  TAGTAGATATCTTTTGGGTGGCATCAAGTCCTCCATTGCTGGTGGGATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGATATCTTTTGGGTGGCATCAAGTCCTCCATTGCTGGTGGGATTA  700

seq1  CAAGCTTGTACAACCACTCTGGAATTCAGTCTGGTGGTTCCACAGAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTGTACAACCACTCTGGAATTCAGTCTGGTGGTTCCACAGAATAT  750

seq1  TGGACATAGTACTAATGGAAAATCCAGCAATAACTCTCCTGGGCATATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATAGTACTAATGGAAAATCCAGCAATAACTCTCCTGGGCATATAT  800

seq1  CCAGAAGATGTTCCAACTGGTAAGAAAGTCACATGCTCCACTATGTTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGATGTTCCAACTGGTAAGAAAGTCACATGCTCCACTATGTTCAT  850

seq1  AGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCTCT  900

seq1  CAACAGAGGAATGGTTACAGAAATGTGGTACATTTACACAATGGAGTACT  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAACAGAGGAATGGTTACAGAAATGT-GTACATTTACACAATGGAGTACT  949

seq1  ACATAGCTATTAAAAATAATTAATTTATGAAATTCCTAGGCAAATGGATT  1000
      ||||||||||||||||||||| ||||||||||||||| | |||||||| |
seq2  ACATAGCTATTAAAAATAATT-ATTTATGAAATTCCTGGCCAAATGGA-T  997

seq1  GACCTGGAGGGCATCATCCTGAGTGAGGTAACTAAATCACAAAAGAATT-  1049
      ||||||   ||||||||| ||||||||   |||||||||| |||||||| 
seq2  GACCTG--AGGCATCATCTTGAGTGAG--TACTAAATCAC-AAAGAATTC  1042

seq1  CACACAATATGTACTCACTGATAAGTGGATATTA  1083
      |||||||||||||||||||||| ||| |||||||
seq2  CACACAATATGTACTCACTGAT-AGTTGATATTA  1075