BAC Information

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BAC

Clone NameB6Ng01-298K10
Chromosome10 (Build37)
Map Location 67,796,244 - 67,797,236
singlet/doubletsinglet
Overlap genenone
Upstream geneEgr2, Gm237, LOC100040081, LOC100039618, Zfp365, Plekhk1, Arid5b, LOC100040136
Downstream gene1700040L02Rik, EG665342, Tmem26, A930033H14Rik, Rhobtb1, LOC100040182
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298K10.g
ACCGA093704
length1,000
definitionB6Ng01-298K10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacacgtttccctgcaaaatgaggtatggcgggcaccgcttttcc
atctttttggctctaggatgttgctgtgagattggtcctactgaacactg
gagaccagggtgagatgaccttgaatacagtgaatgatggaaatatattg
agagttcacatgatagggagaaacctggatgaatccctgaatactgtgga
tgatggggaaagaatttgtggataaaggaaaataggtattctgggggtca
tctgaggctcacaattcctttggagatgactttcttcccctttggagcta
tattgatacggacggggaaatcttgagtggcatggggctcttctgggtta
aggtcctgtatgcttgcaccaccgctccaccccccaagccaaacatgagc
catgtggcaacagacactgtccaccatgtcctgccagctctagagcctgc
ttaattccctagcttccagctaattacctctttaaactcatcacatttct
ctggtaaacaaattcaataaaatggttcctctcaggcaaacatcattgat
aataccctcgtgtatgttatcctaaaactacaaacacacagaaacctcca
aatttgtctactgacatttgagagtcatgagattcgcttcatctatgcaa
gtctattttcaaagaacacatggaaatacaaggctgtcagaattgccagg
gatttcaatggtcttttggtttagcgccatctgatacttcaatcctctct
ataatatctctgccaagtgggtgttcaatctgtgttagagtatattcagt
gctagcaagcacccccccccccccagcccagagaaagatagtttcagcat
tgagtctatgggagtacgggacgggcaggctctaagatttactggccaat
gctactaattactagctcctgtggttgtatcggaattaataaaaaagccc
tctagatgttgcttccccccgttgctcttcaaaagtagaagggaataatg

quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_67796244_67797236
seq2: B6Ng01-298K10.g_69_1068

seq1  GAATTCACACGTTTTCCTGGAACATGAAGTATGGCGTGCAAGGCTTCCTG  50
      |||||||||||||| |||| || |||| |||||||| |||  ||||  | 
seq2  GAATTCACACGTTTCCCTGCAAAATGAGGTATGGCGGGCACCGCTT-TTC  49

seq1  AAAGCCCACAGCTCAATCCATGGTCATGTGAGATAAGGTCTATACTGAAC  100
       |        |||| |   ||| |  ||||||||  ||||  ||||||||
seq2  CATCTTTTTGGCTCTA-GGATGTTGCTGTGAGAT-TGGTC-CTACTGAAC  96

seq1  AGCTGAGACCTGCAGGAGATGACCTTGAATACAGTGCATGATGGAAAGAG  150
      |   |||||| |   ||||||||||||||||||||| |||||||||| | 
seq2  ACTGGAGACCAGGGTGAGATGACCTTGAATACAGTGAATGATGGAAATAT  146

seq1  ATTGTGAGTACAGTAGATAGTGAGAAACATGAATGAATCCATGAATACAG  200
      |||| |||| ||   ||||| ||||||| || |||||||| ||||||| |
seq2  ATTGAGAGTTCACATGATAGGGAGAAACCTGGATGAATCCCTGAATACTG  196

seq1  TGGATGATGGGGAAAGACCATGTGGATGAGGTGACAGATGTATTCTGGGG  250
      |||||||||||||||||   ||||||| | |  | | | |||||||||||
seq2  TGGATGATGGGGAAAGAATTTGTGGATAAAGGAAAATAGGTATTCTGGGG  246

seq1  CTCTTCAAAGGCTCAGAAATCATTTGAGGGTGACTTTCTTCCCCTTTGGA  300
       || ||  ||||||| || || ||||  | ||||||||||||||||||||
seq2  GTCATCTGAGGCTCACAATTCCTTTGGAGATGACTTTCTTCCCCTTTGGA  296

seq1  GCTATCTTGATGCAAACTGGTCTATCTTGAGCAAGATGGGGCTCTTCTGG  350
      ||||| ||||| |  || ||   ||||||||    |||||||||||||||
seq2  GCTATATTGATACGGACGGGGAAATCTTGAGTGGCATGGGGCTCTTCTGG  346

seq1  GTTTTGGTCAGGTATGCTTGCACCACCTCTCCACCCCCAAAGCCAAACAT  400
      |||  ||||  |||||||||||||||| |||||||||| |||||||||||
seq2  GTTAAGGTCCTGTATGCTTGCACCACCGCTCCACCCCCCAAGCCAAACAT  396

seq1  GAGCCATGTGGCAACAGACACTGTCCACCATGTCCTGCCAGCTCTAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATGTGGCAACAGACACTGTCCACCATGTCCTGCCAGCTCTAGAGC  446

seq1  CTGCTTAGTTCCCTAGCTTCCAGCTAATTACCTCTTTAAACTCATCACAT  500
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAATTCCCTAGCTTCCAGCTAATTACCTCTTTAAACTCATCACAT  496

seq1  TTCTCTGGTAAACAAATTCAATAAAATGGTTCCTCTCAGGCAAACATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGTAAACAAATTCAATAAAATGGTTCCTCTCAGGCAAACATCAT  546

seq1  TGATAATACCCTCGTGTATGTTATCCTAAAACTACAAACACACAGAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATACCCTCGTGTATGTTATCCTAAAACTACAAACACACAGAAACC  596

seq1  TCCAAATTTGTCTACTGACATTTGAGAGTCATGAGATTCGCTTCATCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATTTGTCTACTGACATTTGAGAGTCATGAGATTCGCTTCATCTAT  646

seq1  GCAAGTCTATTTTCAAAGAACACATGGAAATACAAGGCTGTCAGAATTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCTATTTTCAAAGAACACATGGAAATACAAGGCTGTCAGAATTGC  696

seq1  CAGGGATTTAAATGGTCTTTTGGTTTAGCGCCATCTGATACTTCAATCCT  750
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATTTCAATGGTCTTTTGGTTTAGCGCCATCTGATACTTCAATCCT  746

seq1  TTCTATAATATCTCTGCCAAGTGGGTGTTCAATCTGTGTTAGAGTATATT  800
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATAATATCTCTGCCAAGTGGGTGTTCAATCTGTGTTAGAGTATATT  796

seq1  CAGTGCTAGCAAGCA-CCCCCCCCCCCCAGCCCAGAGAAGGATAG-TTCA  848
      ||||||||||||||| ||||||||||||||||||||||| ||||| ||||
seq2  CAGTGCTAGCAAGCACCCCCCCCCCCCCAGCCCAGAGAAAGATAGTTTCA  846

seq1  GCATTGAGTCTAT-GGAGTACGGGACGGGCAGGCTCTAAGATTTACT-GC  896
      ||||||||||||| ||||||||||||||||||||||||||||||||| ||
seq2  GCATTGAGTCTATGGGAGTACGGGACGGGCAGGCTCTAAGATTTACTGGC  896

seq1  CAATGCTACTAATTACTAGCT-CTGT-GTTGT-TTGGAAATAATAAAAAA  943
      ||||||||||||||||||||| |||| ||||| | |||| ||||||||||
seq2  CAATGCTACTAATTACTAGCTCCTGTGGTTGTATCGGAATTAATAAAAAA  946

seq1  G-CCTCTAGATGTTGCTTCCCCCC-TTGCTCTTC-AAAGTAG-AGGGAAT  989
      | |||||||||||||||||||||| ||||||||| ||||||| |||||||
seq2  GCCCTCTAGATGTTGCTTCCCCCCGTTGCTCTTCAAAAGTAGAAGGGAAT  996

seq1  AATG  993
      ||||
seq2  AATG  1000