BAC Information

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BAC

Clone NameB6Ng01-299B03
Chromosome10 (Build37)
Map Location 50,638,035 - 50,792,073
singlet/doubletdoublet
Overlap geneSim1
Upstream geneLOC629652, Ascc3
Downstream geneLOC268300, LOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik, Vgll2, Ros1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299B03.bB6Ng01-299B03.g
ACCGA094013GA094014
length233670
definitionB6Ng01-299B03.b B6Ng01-299B03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,791,841 - 50,792,073)(50,638,035 - 50,638,704)
sequence
tctcagtaccactgatctgtgctctggtctctggtcctatctagtccctg
atgatgttatatagttcctcattttccctcaatgtctcagattttatctt
ttctattcctctgtgtatttatataaaatgtattaaatataacatcccca
gggactcttcagcttagttctttatccagcagataaatacagaggcccag
ttgacaaccacaagcggggaagggggagggatg

gaattcctttggtgctgaacagcaatatgaaagtgtaagctgaataaacc
ctttcttccccaacttggttcttggtcatgatgtttgtgcaggaatgcaa
accctgactaagacagcatcttacccttatatgaggatttgtttatttat
cctttatatgaggatgaaggttcagttggttgagaaaaaatcagaggggg
agaattgagttaagtgaggaaggcctgtggtggtcagcccatccaactcc
aagatggggtttaatgtgaattcatgatggaaaactaaaaagctgccttg
acatcactttttcagaactgtctgttcagatattaatattttgcttttaa
agcatagtgatgatattttttatcagagatatttaatgaacaacatataa
tgttccctttaagccttattaaagacatttacaatattattgtaataata
gagctccaatattttttctgtgttcttgcatctctcttgattacagatat
gttattgctgctgctcatttcatttctactaccaagttttatatttatgg
gctaaatcagatgttagagaattggtaaaacaagccatcctgtttatcag
attttacacaaattaccttttgtatttgggtatgtccagatgtgtgtgtg
tgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_50791841_50792073
seq2: B6Ng01-299B03.b_51_283 (reverse)

seq1  CATCCCTCCCCCTTCCCCGCTTGTGGTTGTCAACTGGGCCTCTGTATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTCCCCCTTCCCCGCTTGTGGTTGTCAACTGGGCCTCTGTATTTA  50

seq1  TCTGCTGGATAAAGAACTAAGCTGAAGAGTCCCTGGGGATGTTATATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGGATAAAGAACTAAGCTGAAGAGTCCCTGGGGATGTTATATTTA  100

seq1  ATACATTTTATATAAATACACAGAGGAATAGAAAAGATAAAATCTGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTTATATAAATACACAGAGGAATAGAAAAGATAAAATCTGAGAC  150

seq1  ATTGAGGGAAAATGAGGAACTATATAACATCATCAGGGACTAGATAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGGGAAAATGAGGAACTATATAACATCATCAGGGACTAGATAGGAC  200

seq1  CAGAGACCAGAGCACAGATCAGTGGTACTGAGA  233
      |||||||||||||||||||||||||||||||||
seq2  CAGAGACCAGAGCACAGATCAGTGGTACTGAGA  233


seq1: chr10_50638035_50638704
seq2: B6Ng01-299B03.g_69_738

seq1  GAATTCCTTTGGTGCTGAACAGCAATATGAAAGTGTAAGCTGAATAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGGTGCTGAACAGCAATATGAAAGTGTAAGCTGAATAAACC  50

seq1  CTTTCTTCCCCAACTTGGTTCTTGGTCATGATGTTTGTGCAGGAATGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCCCCAACTTGGTTCTTGGTCATGATGTTTGTGCAGGAATGCAA  100

seq1  ACCCTGACTAAGACAGCATCTTACCCTTATATGAGGATTTGTTTATTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGACTAAGACAGCATCTTACCCTTATATGAGGATTTGTTTATTTAT  150

seq1  CCTTTATATGAGGATGAAGGTTCAGTTGGTTGAGAAAAAATCAGAGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATATGAGGATGAAGGTTCAGTTGGTTGAGAAAAAATCAGAGGGGG  200

seq1  AGAATTGAGTTAAGTGAGGAAGGCCTGTGGTGGTCAGCCCATCCAACTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGAGTTAAGTGAGGAAGGCCTGTGGTGGTCAGCCCATCCAACTCC  250

seq1  AAGATGGGGTTTAATGTGAATTCATGATGGAAAACTAAAAAGCTGCCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGGGTTTAATGTGAATTCATGATGGAAAACTAAAAAGCTGCCTTG  300

seq1  ACATCACTTTTTCAGAACTGTCTGTTCAGATATTAATATTTTGCTTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACTTTTTCAGAACTGTCTGTTCAGATATTAATATTTTGCTTTTAA  350

seq1  AGCATAGTGATGATATTTTTTATCAGAGATATTTAATGAACAACATATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGTGATGATATTTTTTATCAGAGATATTTAATGAACAACATATAA  400

seq1  TGTTCCCTTTAAGCCTTATTAAAGACATTTACAATATTATTGTAATAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCTTTAAGCCTTATTAAAGACATTTACAATATTATTGTAATAATA  450

seq1  GAGCTCCAATATTTTTTCTGTGTTCTTGCATCTCTCTTGATTACAGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCAATATTTTTTCTGTGTTCTTGCATCTCTCTTGATTACAGATAT  500

seq1  GTTATTGCTGCTGCTCATTTCATTTCTACTACCAAGTTTTATATTTATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGCTGCTGCTCATTTCATTTCTACTACCAAGTTTTATATTTATGG  550

seq1  GCTAAATCAGATGTTAGAGAATTGGTAAAACAAGCCATCCTGTTTATCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAATCAGATGTTAGAGAATTGGTAAAACAAGCCATCCTGTTTATCAG  600

seq1  ATTTTACACAAATTACCTTTTGTATTTGGGTATGTCCAGATGTGTGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACACAAATTACCTTTTGTATTTGGGTATGTCCAGATGTGTGTGTG  650

seq1  TGTGTGTGTGTGTGTGTGTG  670
      ||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTG  670


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