BAC Information

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BAC

Clone NameB6Ng01-300D23
Chromosome10 (Build37)
Map Location 76,740,313 - 76,740,578
singlet/doubletsinglet
Overlap genenone
Upstream geneDip2a, Pcnt, 2610028H24Rik, A130042E20Rik, Mcm3ap, Lss, 1700027D21Rik, Ftcd, Col6a2, Col6a1, Pcbp3, LOC100041099, Slc19a1, Col18a1, LOC665762, Pofut2
Downstream geneAdarb1, 1810008A18Rik, Itgb2, Pttg1ip, Sumo3, Ube2g2, LOC674243, LOC670895, Krtap12-1, A030009A09Rik, LOC100041250, LOC100041261, LOC634517, LOC100041281, LOC634504, LOC675294, LOC670880, LOC100040299, LOC675238, C330046G03Rik, EG544710, LOC100041351, 1700009J07Rik, Lrrc3, Trpm2, 1810043G02Rik, Pfkl, Aire, Dnmt3l, Icosl, D10Jhu81e, Pwp2, Tmem1, Agpat3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300D23.bB6Ng01-300D23.g
ACCGA094872GA094873
length1,186980
definitionB6Ng01-300D23.b B6Ng01-300D23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagacccatcttttaaggaggttatttgatt
ttctggagtccaccctctggagttctttatatatattggatattagtccc
ctatctgatttaagataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattggtggtgtcttttgtcttgcagaagctttgcagtttca
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgatgtt
ctattcaggaatatccccccgtgcccatatctttgaggcttttcaccact
ttctcctctgtaaatttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaacgagataggaatggatcaattccca
ttcttctacatgataacaaccatttgtgccagcaccatttgttgaaaatg
ctgtctttctttcactggatggttttagctcccttgtcaaagaccaagtg
accataggtgtgtgggttcatttctgggttttcaattctattccatttgt
ctacttgtctatcactataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaagtactttt
atccttgagaagagtttttgctttcttaggttttttgttattccagatga
atttgcagattgccctttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgttgattgcttttggcaagatagccatttt
tacaatgtttatcctgccaatccatgagcatgggagaccttttcatattc
tgagatcttctttaatttctttcttcagagacttgaaatttttatcatac
agatctttcatttccttagttagagtcatgccaaggtattttatattatt
tgtgactatgagaaggtgttgtttccctaatttctttctcagcctgttta
ttcttgtgtagagaatgccattgacttgttggagtttaatttttattatc
agctacttcactgaagctgtttattcaggttagagttctctggtggattt
ttagagttcactatatatactaatccatatcactgcaaagtgaaatgtgc
acttcatctttccgatggtatccccttggatattcc
gaattctcacaacaatgtcagggttgtttttggtctttgtcagaattttg
tgggggaagggagcaggagaattgctaatcttgttatggtaatttctctg
agaagagttaatattgttttggcagcttttaggctgaatcattttgactg
ctaaaactatgtttttacatttgtttagtcggccagctctgcactttgtc
tgttagtaccgtttggaaagtcattttcaacgggggaaggtactgggtgg
tcttgaattcattttggataataagtgggagaaccctgaatgtctatcag
ggcaagactttatagtaagcaagaggggagggtaagtgtgcaagcatcta
attggaaagctactgtggccttaaacataactggctggtgctgggagtca
tatcataaatttaatttctgctcccctctgcattggtggtcattaagcag
aggatgatcttgtaacctggggggggggcaggtttactgagtaaataatc
tggaaattctggtcttgttgagggtgaaatctgtaagaagtttaagggat
tatctgttcctaaaatgcagcagcacattagtgctgaggcaaatacaact
gaaggagggtatcaggttctaggccaagcaaggaaaacctggcaacattg
gacacataattccagttttagagtcatggaggatgcaagagtaaaagggt
tgtagaatcttcaaggataatcacccaaactgcatgcatgttggtaatgt
ctttggatagactcagaaagaacacagtgtaaatcagtgaaagtgataac
tggaatgcatcggagaaaaagaagttagagatgcaagagcagtaagatat
ctgtgaagaagatctgccagggagaagagaaccagctcaggaaaccaaag
ctataataatgaaaccatttgaaccttttgacacagttattatgatttgg
agtttgctgttgtgcttcagtcttattttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_76740313_76740578
seq2: B6Ng01-300D23.g_67_336 (reverse)

seq1  TATCCAAAATGAATTCAAGACCACCCAGTACCTTCCCCCTTCAAAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||| |  |||| ||
seq2  TATCCAAAATGAATTCAAGACCACCCAGTACCTTCCCCCGTTGAAAATGA  50

seq1  CTTTCCAAACTGTACTAGCAGGCAAAGTGCAGAGCCAGATAAGGAAGCTG  100
      |||||||||| |||||| ||| ||||||||||             |||||
seq2  CTTTCCAAACGGTACTAACAGACAAAGTGCAG-------------AGCTG  87

seq1  GCTGACTAAACAAATGTAAAAACATAGTTTTAGCAGTCAAAATGATTAAG  150
      || |||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCCGACTAAACAAATGTAAAAACATAGTTTTAGCAGTCAAAATGATTCAG  137

seq1  CCT-GAAGCTACCAAAATAATATTAGCTCTTCTCAGAGAAATAACCATAA  199
      |||  ||||| |||||| ||||||| |||||||||||||||| |||||||
seq2  CCTAAAAGCTGCCAAAACAATATTAACTCTTCTCAGAGAAATTACCATAA  187

seq1  CAAGATTAGCAATTCTCCTG----------------AATTCTGACAAAGA  233
      ||||||||||||||||||||                ||||||||||||||
seq2  CAAGATTAGCAATTCTCCTGCTCCCTTCCCCCACAAAATTCTGACAAAGA  237

seq1  CCACAAACCACCCTGACCTTGTTTCGAGAATTC  266
      ||| |||| |||||||| |||||  ||||||||
seq2  CCAAAAACAACCCTGACATTGTTGTGAGAATTC  270