BAC Information

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BAC

Clone NameB6Ng01-300F11
Chromosome10 (Build37)
Map Location 103,010,812 - 103,011,725
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697
Downstream geneLOC667701, EG627488, EG667692, EG667695, LOC100043292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300F11.bB6Ng01-300F11.g
ACCGA094943GA094944
length1,0441,183
definitionB6Ng01-300F11.b B6Ng01-300F11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttatgagccccattttttaatggggttgttcgatt
ttctgaagtcccccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaataatcctttcccaatttgttggtggtct
ttttgtcttactgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattcacgatcttacagtacaagccattactgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttcctcac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgactaaaaggctagtgtttaataatccaatcttcaag
tgtttctcagtatttctttttagtaaaaatgactttttatacaaaatatt
ctgaaaatgctttttcctttcataaattcttccaattcattctactaccc
ctctcatttggatccacatcctttctgttcctgcttagaaacaaatggcc
atctaagcagcataattaaaaaaaataagataaaacaacaacaacaaaaa
caaatcagaataggacacacagcgatacatatgttttcttacacaggtat
tccataaaatcgcagaggtatacacacacacactgcaaacacacacacac
acacacacacacacacacacacgacattctacataccagacataatcttt
cttacttccattgttgaaaagatatccaaattccccatggtaatctggat
caatctctcttcctaacactgttattccttttttattctgtcgatttaag
ggcattagaagccaaaatgaccaagaggaagtctggactttcagttcagt
ggtatgtttattgtggctcctggtatgagtgctcccctctctgaacccaa
atgtctaggtcagcagaattcaaggtcacaggaacaagaaataaactatt
cctcatgggtcactgggagtgatagtgaatggaactattccctt
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatatggagaaagaggaacactcctccattgttggtg
ggcttgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccatctggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaacaatgaatttatgaaattcctgggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaat
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggtccatgtaaagacttccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcaaaa
ggacccagatgtagctgtctcttgtgagactatgccggggccctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacaggctccca
atggaggagctagagaaagaacccaagatctaagggatctgcaaccctat
aggccgacacattatgactaccagtaccccgggagcctctgactctagct
gcatatgtatcaaaagatgactagtcgcatcactgaaagagaggtccatg
actcagcaacctttatatgtccagttacaggatccaagtctaacggcact
gctgctcaggcaattcggctgcacttcactgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103010812_103011725
seq2: B6Ng01-300F11.b_44_958

seq1  GAATTCTTTGTTCAGTTATGAGCCCCATTTTTTAATGGGGTTGTTCGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTATGAGCCCCATTTTTTAATGGGGTTGTTCGATT  50

seq1  TTCTGAAGTCCCCCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCCCCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100

seq1  CTATCTGATTTAGGATAGGTAATAATCCTTTCCCAATTTGTTGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAATAATCCTTTCCCAATTTGTTGGTGGTCT  150

seq1  TTTTGTCTTACTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTACTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200

seq1  TTAGGTCCCATTTGTCAATTCACGATCTTACAGTACAAGCCATTACTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCCCATTTGTCAATTCACGATCTTACAGTACAAGCCATTACTGTT  250

seq1  CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCTCAC  300

seq1  TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGA  350

seq1  TCCACTTAGATTTGACTAAAAGGCTAGTGTTTAATAATCCAATCTTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTAGATTTGACTAAAAGGCTAGTGTTTAATAATCCAATCTTCAAG  400

seq1  TGTTTCTCAGTATTTCTTTTTAGTAAAAATGACTTTTTATACAAAATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCAGTATTTCTTTTTAGTAAAAATGACTTTTTATACAAAATATT  450

seq1  CTGAAAATGCTTTTTCCTTTCATAAATTCTTCCAATTCATTCTACTACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATGCTTTTTCCTTTCATAAATTCTTCCAATTCATTCTACTACCC  500

seq1  CTCTCATTTGGATCCACATCCTTTCTGTTCCTGCTTAGAAACAAATGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATTTGGATCCACATCCTTTCTGTTCCTGCTTAGAAACAAATGGCC  550

seq1  ATCTAAGCAGCATAATTAAAAAAAATAAGATAAAACAACAACAACAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGCAGCATAATTAAAAAAAATAAGATAAAACAACAACAACAAAAA  600

seq1  CAAATCAGAATAGGACACACAGCGATACATATGTTTTCTTACACAGGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAGAATAGGACACACAGCGATACATATGTTTTCTTACACAGGTAT  650

seq1  TCCATAAAATCGCAGAGGTATACACACACACAC-ACAAACACACACACAC  699
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  TCCATAAAATCGCAGAGGTATACACACACACACTGCAAACACACACACAC  700

seq1  ACACACACACACACACACACACGACATTCTACATACCAGACATAATCTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACGACATTCTACATACCAGACATAATCTTT  750

seq1  CTTACTTCCATTGTTGAAAAGATATCCAAATTCCCCATGGTAATCTGGAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTCCATTGTTGAAAAGATATCCAAATTCCCCATGGTAATCTGGAT  800

seq1  CAATCTCTCTTCCTAACACTGTTATTCCTTTTTTATTCTGTCGATTTAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCTCTTCCTAACACTGTTATTCCTTTTTTATTCTGTCGATTTAAG  850

seq1  GGCATTAGAAGCCAAAATGACCAAGAGGAAGTCTGGACTTTCAGTTCAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTAGAAGCCAAAATGACCAAGAGGAAGTCTGGACTTTCAGTTCAGT  900

seq1  GGTATGTTTATTGTG  914
      |||||||||||||||
seq2  GGTATGTTTATTGTG  915