BAC Information

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BAC

Clone NameB6Ng01-300H18
Chromosome10 (Build37)
Map Location 91,299,945 - 91,403,982
singlet/doubletdoublet
Overlap genenone
Upstream geneAnks1b, Apaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream geneLOC100041799, LOC667203, LOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300H18.bB6Ng01-300H18.g
ACCGA095049GA095050
length1,169997
definitionB6Ng01-300H18.b B6Ng01-300H18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,402,813 - 91,403,982)(91,299,945 - 91,300,651)
sequence
gaattccaaaatttatatatacatacaagtatttaaaaagaatttgatga
tagaggtactgaaggtgtgtaggagtgccgataaatgttggaatgttgat
aaataaataaagtggaaactaattggtattagaggtatggtaatgaaatt
aacacagaaatgacatacaattgactgtgtatttctccactttttatttg
gttgaaaatgaaaccaacagaacataaatcatctagataaacaaggaaat
atgttgtctaatgagtggacagtgctcatggacatgttagtattgggtat
gcttggatccagcaggtgattaatctatctctttatgcttgggatagctt
ttcttttttccatttcattctcaacgagtctttgagtaatagccctccgg
gcttcacaaacataggagaaagaaagcttttagtcttcagtagttcatta
attaattcatcaagtgttgaattaattccctttgtagcagtatatggaat
ataacactgaaaagaatacataagtttggttccttatggaggttacatct
agtcagagaaggaaagttaaaaataacagtaaaaacaaacacaatataaa
gtagtgataacctctaagaaaacagagcaagctgaaggaagggaagtaag
tgccgaagataaagttactgctaccacagaagttgcttgagcaaaatgat
tgggccaagtaaacacaaacagcaagtgttgccagaagatcagaaagcaa
acaaaaatccaggctcaggctcataaaagagcactcgtgaactggaaact
tctggggttttttttgagactccattgtgtcatgtgatgcctttctggaa
gctgttttatgagatgttttgctgtagcagacatgtgagaggatacatgg
gtgtttggaaagagtataagtagagcccaagagacaatggatgacattgc
attggtttaccttgcaatgctatactggtcttcattgacaaggctctaca
tcgtttgccttgctttgctggtcttcacctgatatttgctgccataattt
gtagaaagaaacatgccaaagaatttcttgtgccattccagtgcttcttg
acactttcatgacctagtgccattaacagagagtctgtggttacatttgg
gaatcaaacacccactacg
gaattctttcatgaattcacaggggcaaaggggtagtggagagtcctgaa
tgagatcccaaatgtagggtctgagtgtgtaaaatctgaaagagaatttt
tgcaattttatgaaattacggtaagctaaaaatattaagtgctgaaattc
agtgtccacaaagaggaaggttttttttaaagcaaaacaaaaattattac
taatactattgcatccagactgaagcttccccccccctctcttgttccca
gagtctctgcaccttttccaatccactcctcctctcccctctctcctcag
aaaagggcaggccacccacggatgtcaaccaaccttggtttatcaagttg
cagtaaaactaggcacctccctttgtattaaggctggataaggcaaccca
gtatgaggaaaaggatcctaaaagtggcaaaggagttagagatagctccc
actcccactgttaggaatccctcaaaaagaccaagctatacaactggaac
atatattcagatggcctaacagtcaggattcctgggtggaggtccagtct
ttgtgaacctgtatgagaatccaggttagttgattctatgaggttttttt
tttgtttgttttgttttgttttgtttttttgtgacccctctggctcttgt
aatccttcctcccctcttccataggattcccaagatctgcctaatgtttg
gctgtgggtgtctataggatgaagcctgtctgatgaccactgggctaggc
acctatctgtgagtataggggaatatcgctatattcatttcattgacatt
ttttttttctggttgtgtttggttttatcccaggtctctaggctatccag
cttctgggttctacccctccatgcagtgtcaggctaggctctcccttgtg
gcatgggactcaaactgaaccagtcattggttggccaccccccacaaatt
ctgtgccacttctttcctcagtcatcttgtagacacacatgggtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91402813_91403982
seq2: B6Ng01-300H18.b_49_1217 (reverse)

seq1  CGTAGTGGTTGTTTGAT--CCAAATGTAACCACA-AGGCTCTGTTAAATT  47
      |||||||| ||||||||  ||||||||||||||| |  |||||||||  |
seq2  CGTAGTGGGTGTTTGATTCCCAAATGTAACCACAGACTCTCTGTTAA--T  48

seq1  GGCACTAGTTCATGAAAGTGTCAAGAAGCAACTGGAATGGCACAAGAAAT  97
      |||||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  GGCACTAGGTCATGAAAGTGTCAAGAAGC-ACTGGAATGGCACAAGAAAT  97

seq1  TCTTTGGCATGTTTCTTTCTACAAATTTATGGCAAGCAAATATCA-GTGA  146
      ||||||||||||||||||||||||| ||||||| ||||||||||| ||||
seq2  TCTTTGGCATGTTTCTTTCTACAAA-TTATGGC-AGCAAATATCAGGTGA  145

seq1  AGACCAGCAAAGCAAGGCAAACGATGTAAGAGCCTTGTCAATGAAGACCA  196
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGACCAGCAAAGCAAGGCAAACGATGT-AGAGCCTTGTCAATGAAGACCA  194

seq1  GTATAGCATTGCAAGGTAAACCAATGCAATGTCATCCATTGTCTCTTGGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGCATTGCAAGGTAAACCAATGCAATGTCATCCATTGTCTCTTGGG  244

seq1  CTCTACTTATACTCTTTCCAAACA-CCATGTATCCTCTCACATGTCTGCT  295
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTCTACTTATACTCTTTCCAAACACCCATGTATCCTCTCACATGTCTGCT  294

seq1  ACAGCAAAACATCTCATAAAACAGCTTCCAGAAAGGCATCACATGACACA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAAACATCTCATAAAACAGCTTCCAGAAAGGCATCACATGACACA  344

seq1  ATGGAGTCTCAAAAAAAACCCCAGAAGTTTCCAGTTCACGAGTGCTCTTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTCTCAAAAAAAACCCCAGAAGTTTCCAGTTCACGAGTGCTCTTT  394

seq1  TATGAGCCTGAGCCTGGATTTTTGTTTGCTTTCTGATCTTCTGGCAACAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGCCTGAGCCTGGATTTTTGTTTGCTTTCTGATCTTCTGGCAACAC  444

seq1  TTGCTGTTTGTGTTTACTTGGCCCAATCATTTTGCTCAAGCAACTTCTGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTTTGTGTTTACTTGGCCCAATCATTTTGCTCAAGCAACTTCTGT  494

seq1  GGTAGCAGTAACTTTATCTTCGGCACTTACTTCCCTTCCTTCAGCTTGCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCAGTAACTTTATCTTCGGCACTTACTTCCCTTCCTTCAGCTTGCT  544

seq1  CTGTTTTCTTAGAGGTTATCACTACTTTATATTGTGTTTGTTTTTACTGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCTTAGAGGTTATCACTACTTTATATTGTGTTTGTTTTTACTGT  594

seq1  TATTTTTAACTTTCCTTCTCTGACTAGATGTAACCTCCATAAGGAACCAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAACTTTCCTTCTCTGACTAGATGTAACCTCCATAAGGAACCAA  644

seq1  ACTTATGTATTCTTTTCAGTGTTATATTCCATATACTGCTACAAAGGGAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATGTATTCTTTTCAGTGTTATATTCCATATACTGCTACAAAGGGAA  694

seq1  TTAATTCAACACTTGATGAATTAATTAATGAACTACTGAAGACTAAAAGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCAACACTTGATGAATTAATTAATGAACTACTGAAGACTAAAAGC  744

seq1  TTTCTTTCTCCTATGTTTGTGAAGCCCGGAGGGCTATTACTCAAAGACTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTCCTATGTTTGTGAAGCCCGGAGGGCTATTACTCAAAGACTC  794

seq1  GTTGAGAATGAAATGGAAAAAAGAAAAGCTATCCCAAGCATAAAGAGATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAATGAAATGGAAAAAAGAAAAGCTATCCCAAGCATAAAGAGATA  844

seq1  GATTAATCACCTGCTGGATCCAAGCATACCCAATACTAACATGTCCATGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATCACCTGCTGGATCCAAGCATACCCAATACTAACATGTCCATGA  894

seq1  GCACTGTCCACTCATTAGACAACATATTTCCTTGTTTATCTAGATGATTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTCCACTCATTAGACAACATATTTCCTTGTTTATCTAGATGATTT  944

seq1  ATGTTCTGTTGGTTTCATTTTCAACCAAATAAAAAGTGGAGAAATACACA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTGTTGGTTTCATTTTCAACCAAATAAAAAGTGGAGAAATACACA  994

seq1  GTCAATTGTATGTCATTTCTGTGTTAATTTCATTACCATACCTCTAATAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTGTATGTCATTTCTGTGTTAATTTCATTACCATACCTCTAATAC  1044

seq1  CAATTAGTTTCCACTTTATTTATTTATCAACATTCCAACATTTATCGGCA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGTTTCCACTTTATTTATTTATCAACATTCCAACATTTATCGGCA  1094

seq1  CTCCTACACACCTTCAGTACCTCTATCATCAAATTCTTTTTAAATACTTG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACACACCTTCAGTACCTCTATCATCAAATTCTTTTTAAATACTTG  1144

seq1  TATGTATATATAAATTTTGGAATTC  1170
      |||||||||||||||||||||||||
seq2  TATGTATATATAAATTTTGGAATTC  1169

seq1: chr10_91299945_91300651
seq2: B6Ng01-300H18.g_68_774

seq1  GAATTCTTTCATGAATTCACAGGGGCAAAGGGGTAGTGGAGAGTCCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCATGAATTCACAGGGGCAAAGGGGTAGTGGAGAGTCCTGAA  50

seq1  TGAGATCCCAAATGTAGGGTCTGAGTGTGTAAAATCTGAAAGAGAATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCCCAAATGTAGGGTCTGAGTGTGTAAAATCTGAAAGAGAATTTT  100

seq1  TGCAATTTTATGAAATTACGGTAAGCTAAAAATATTAAGTGCTGAAATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTTTATGAAATTACGGTAAGCTAAAAATATTAAGTGCTGAAATTC  150

seq1  AGTGTCCACAAAGAGGAAGGTTTTTTTTAAAGCAAAACAAAAATTATTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCACAAAGAGGAAGGTTTTTTTTAAAGCAAAACAAAAATTATTAC  200

seq1  TAATACTATTGCATCCAGACTGAAGCTTCCCCCCCCCTCTCTTGTTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTATTGCATCCAGACTGAAGCTTCCCCCCCCCTCTCTTGTTCCCA  250

seq1  GAGTCTCTGCACCTTTTCCAATCCACTCCTCCTCTCCCCTCTCTCCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCTGCACCTTTTCCAATCCACTCCTCCTCTCCCCTCTCTCCTCAG  300

seq1  AAAAGGGCAGGCCACCCACGGATGTCAACCAACCTTGGTTTATCAAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGCAGGCCACCCACGGATGTCAACCAACCTTGGTTTATCAAGTTG  350

seq1  CAGTAAAACTAGGCACCTCCCTTTGTATTAAGGCTGGATAAGGCAACCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAACTAGGCACCTCCCTTTGTATTAAGGCTGGATAAGGCAACCCA  400

seq1  GTATGAGGAAAAGGATCCTAAAAGTGGCAAAGGAGTTAGAGATAGCTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGGAAAAGGATCCTAAAAGTGGCAAAGGAGTTAGAGATAGCTCCC  450

seq1  ACTCCCACTGTTAGGAATCCCTCAAAAAGACCAAGCTATACAACTGGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCACTGTTAGGAATCCCTCAAAAAGACCAAGCTATACAACTGGAAC  500

seq1  ATATATTCAGATGGCCTAACAGTCAGGATTCCTGGGTGGAGGTCCAGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTCAGATGGCCTAACAGTCAGGATTCCTGGGTGGAGGTCCAGTCT  550

seq1  TTGTGAACCTGTATGAGAATCCAGGTTAGTTGATTCTATGAGGTTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAACCTGTATGAGAATCCAGGTTAGTTGATTCTATGAGGTTTTTTT  600

seq1  TTTGTTTGTTTTGTTTTGTTTTGTTTTTTTGTGACCCCTCTGGCTCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTTGTTTTGTTTTGTTTTTTTGTGACCCCTCTGGCTCTTGT  650

seq1  AATCCTTCCTCCCCTCTTCCATAGGATTCCCAAGATCTGCCTAATGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTCCTCCCCTCTTCCATAGGATTCCCAAGATCTGCCTAATGTTTG  700

seq1  GCTGTGG  707
      |||||||
seq2  GCTGTGG  707