BAC Information

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BAC

Clone NameB6Ng01-302O22
Chromosome10 (Build37)
Map Location 91,838,058 - 91,964,742
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041799, LOC667203
Downstream geneLOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854, Lta4h, Hal
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302O22.bB6Ng01-302O22.g
ACCGA096856GA096857
length1,128770
definitionB6Ng01-302O22.b B6Ng01-302O22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,838,058 - 91,839,177)(91,963,976 - 91,964,742)
sequence
gaattcataaatgataattgaaaagctagcagccattcccagctggcttc
aagacttcaatggtctgtaaccagcaaagaggatggtttttaaaaaggca
acgtgccagtcatgggctctgtctgactattgataaaatactgaccgcag
cattacagggaatcaatcaacaatgcaaagagctgaccaaaagacaaaca
tgggagtctggccttctatgcgagatacaggcttttgtgacagacatcac
atgtctgcacagattcgctttgcattgtaccagcttagacttccatcaga
aaaccatccttactaaggtcaacttcagaagttcagacatttttgagcct
aaaactctgcccaaagtttatatagaatgagaaaattccaagtttctaac
ctcaggctgtgataacttttacctatttttgcccacaaagagaatcattt
ctaaagccctaaagatacattcattgaacactttgtttcctaacatagta
gtaagtcaattagtagcttatatttccatctagttttgtctcattaccaa
ctatttcaggtacctatgttgagttatatgagtccaaaaatgaacagaga
aataaatctcctgactaatgctaattgggttttttatgcattaaaaagaa
agctgtataaatcgctggattaaataacaagcgattggtgctgttattcc
aattacggcacctctagaagaggaggaaagaagaaaaaaaaaacccaact
tctaagcctccactatacaacagcaagatgaattcaggttaatttattaa
tgcatttgatttagcatataatgagcttgtagctattgatgccacttaaa
ttcatttaactaatcagagttcagagtctttaaaaaaattaaactaactt
ttatgctaaaaggactcagaatcaaaagcaataaaaggaaacaatcggga
cagggtcatgactgggcagcttgcagaaatagtcaagaccatctctgtgt
ctggactaaaaaaaacctatcctttttttcctctgctattttcttttaga
tatgctgatctggaatgcaggaccccaaatggagagttaaggaaagactg
aaaggagctggagagtttgtacccacag

gaattcattcctgtgttcaaataagatgaaagtctgcaggtgtggttgga
agaaatattaaagtcgggggtcaaagagtaggtatgaattcacaagcaaa
gggagggagaatgacagtatagacattagcaagaagaaaaaataatgtga
agagttgacctcaccagtgtgggtaagatgggagtaggagccagcaatgg
gcaagtcataaagctttgtttctcaaactgagtcttctgttttcatctgg
atggctttggaaacaaggcaccttctgctcagcaaggggaaagctgggtt
gtaggtgtctgggagttcgaggcagtaggtaggactcaggtgattaagta
gtagaaagaactctttctttctgtctgtctcactgtctctgtctctgtct
ctgtctctgtctctgtctctgtctctctgtctctctgtctctctgtctct
ctgtctctctgtctctctctctctctctctctctctgggtgtgtataggt
gtgtgtgtaatataatattttagaaggcaaaatctacagaggtggaagaa
ttgctgaagctgaatatgttgtaaggacttcctccacgtggttggtatct
ttgcctgcacacaaatgacctatagcaggagaatcaggcttggggggggg
gggagagatgacaacttgtggacacttctgcactgggactattttaccca
ggccccttaaccttggactcctggggaaaacaaggtgacagttcagctta
taaagtctcaaacaacagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91838058_91839177
seq2: B6Ng01-302O22.b_47_1174

seq1  GAATTCATAAATGATAATTGAAAAGCTAGCAGCCATTCCCAGCTGGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAATGATAATTGAAAAGCTAGCAGCCATTCCCAGCTGGCTTC  50

seq1  AAGACTTCAATGGTCTGTAACCAGCAAAGAGGATGGTTTTTAAAAAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTCAATGGTCTGTAACCAGCAAAGAGGATGGTTTTTAAAAAGGCA  100

seq1  ACGTGCCAGTCATGGGCTCTGTCTGACTATTGATAAAATACTGACCGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGCCAGTCATGGGCTCTGTCTGACTATTGATAAAATACTGACCGCAG  150

seq1  CATTACAGGGAATCAATCAACAATGCAAAGAGCTGACCAAAAGACAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAGGGAATCAATCAACAATGCAAAGAGCTGACCAAAAGACAAACA  200

seq1  TGGGAGTCTGGCCTTCTATGCGAGATACAGGCTTTTGTGACAGACATCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGTCTGGCCTTCTATGCGAGATACAGGCTTTTGTGACAGACATCAC  250

seq1  ATGTCTGCACAGATTCGCTTTGCATTGTACCAGCTTAGACTTCCATCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGCACAGATTCGCTTTGCATTGTACCAGCTTAGACTTCCATCAGA  300

seq1  AAACCATCCTTACTAAGGTCAACTTCAGAAGTTCAGACATTTTTGAGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATCCTTACTAAGGTCAACTTCAGAAGTTCAGACATTTTTGAGCCT  350

seq1  AAAACTCTGCCCAAAGTTTATATAGAATGAGAAAATTCCAAGTTTCTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTGCCCAAAGTTTATATAGAATGAGAAAATTCCAAGTTTCTAAC  400

seq1  CTCAGGCTGTGATAACTTTTACCTATTTTTGCCCACAAAGAGAATCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCTGTGATAACTTTTACCTATTTTTGCCCACAAAGAGAATCATTT  450

seq1  CTAAAGCCCTAAAGATACATTCATTGAACACTTTGTTTCCTAACATAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCCCTAAAGATACATTCATTGAACACTTTGTTTCCTAACATAGTA  500

seq1  GTAAGTCAATTAGTAGCTTATATTTCCATCTAGTTTTGTCTCATTACCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTCAATTAGTAGCTTATATTTCCATCTAGTTTTGTCTCATTACCAA  550

seq1  CTATTTCAGGTACCTATGTTGAGTTATATGAGTCCAAAAATGAACAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCAGGTACCTATGTTGAGTTATATGAGTCCAAAAATGAACAGAGA  600

seq1  AATAAATCTCCTGACTAATGCTAATTGGGTTTTTTATGCATTAAAAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATCTCCTGACTAATGCTAATTGGGTTTTTTATGCATTAAAAAGAA  650

seq1  AGCTGTATAAATCGCTGGATTAAATAACAAGCGATTGGTGCTGTTATTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTATAAATCGCTGGATTAAATAACAAGCGATTGGTGCTGTTATTCC  700

seq1  AATTACGGCACCTCTAGAAGAGGAGGAAAGAAG-AAAAAAAAACCCAACT  749
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATTACGGCACCTCTAGAAGAGGAGGAAAGAAGAAAAAAAAAACCCAACT  750

seq1  TCTAAGCCTCCACTATACAACAGCAAGATGAATTCAGGTTAATTTATTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCCTCCACTATACAACAGCAAGATGAATTCAGGTTAATTTATTAA  800

seq1  TGCATTTGATTTAGCATATAATGAGCTTGTAGCTATTGATGCCACTTAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTGATTTAGCATATAATGAGCTTGTAGCTATTGATGCCACTTAAA  850

seq1  TTCATTTAACTAATCAGAGTTCAGAGTCTTTAAAAAAATTAAACTAAC-T  898
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTCATTTAACTAATCAGAGTTCAGAGTCTTTAAAAAAATTAAACTAACTT  900

seq1  TTATGCTAAAAGGACTCAGAATCAAAAGCA--TAAAGGAAACAATC-GGA  945
      ||||||||||||||||||||||||||||||   ||||||||||||| |||
seq2  TTATGCTAAAAGGACTCAGAATCAAAAGCAATAAAAGGAAACAATCGGGA  950

seq1  CA-GGTCATGACTGGGCAGCTTGCAGAAATAGTCAAGACCATCTCTGTGT  994
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCATGACTGGGCAGCTTGCAGAAATAGTCAAGACCATCTCTGTGT  1000

seq1  CTGGACT-AAAAAAACCTATCC-TTTTTTCCTCTTGCTATTT--CTTTAG  1040
      ||||||| |||||||||||||| |||||||||| ||||||||   |||||
seq2  CTGGACTAAAAAAAACCTATCCTTTTTTTCCTC-TGCTATTTTCTTTTAG  1049

seq1  ATATGCTGATCT-GAATGCAGGAACCCCAATGGAGGAGTTAGGGAAAGGA  1089
      |||||||||||| |||||||||| ||| |||||| |||||| ||||| ||
seq2  ATATGCTGATCTGGAATGCAGGACCCCAAATGGA-GAGTTAAGGAAA-GA  1097

seq1  CTG-AAGGAGCTGAAGGAGTTTGTAACCACAG  1120
      ||| ||||||||| | ||||||||| ||||||
seq2  CTGAAAGGAGCTGGA-GAGTTTGTACCCACAG  1128


seq1: chr10_91963976_91964742
seq2: B6Ng01-302O22.g_64_833 (reverse)

seq1  ATCTGCTGTTTGAGACTTTAGTAAGCAGAACTGTCACCTTG-TTTCCCCA  49
      ||||| |||||||||||||| ||||| |||||||||||||| ||||||||
seq2  ATCTGTTGTTTGAGACTTTA-TAAGCTGAACTGTCACCTTGTTTTCCCCA  49

seq1  GG-GTCCAAGGCTAA-GGGCCTGGGTAAAATAGT-CCAGTGCAGATGTGT  96
      || |||||||| ||| |||||||||||||||||| |||||||||| ||||
seq2  GGAGTCCAAGGTTAAGGGGCCTGGGTAAAATAGTCCCAGTGCAGAAGTGT  99

seq1  CCACATGTTGTCATCTCTCCCCCCCCCCCCAAGCCTGATTCTCCTGCTAT  146
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGTTGTCATCTCTCCCCCCCCCCCCAAGCCTGATTCTCCTGCTAT  149

seq1  AGGTCATTTGTGTGCAGGCAAAGATACCAACCACGTGGAGGAAGTCCTTA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCATTTGTGTGCAGGCAAAGATACCAACCACGTGGAGGAAGTCCTTA  199

seq1  CAACATATTCAGCTTCAGCAATTCTTCCACCTCTGTAGATTTTGCCTTCT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATATTCAGCTTCAGCAATTCTTCCACCTCTGTAGATTTTGCCTTCT  249

seq1  AAAATATTATATTACACACACACCTATACACACCCAGAGAGAGAGAGAGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTATATTACACACACACCTATACACACCCAGAGAGAGAGAGAGA  299

seq1  GAGAGAGAGACAGAGAGACAGAGAGACAGAGAGACAGAGAGACAGAGAGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGACAGAGAGACAGAGAGACAGAGAGACAGAGAGACAGAGAGA  349

seq1  CAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGTGAGACAGACA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGTGAGACAGACA  399

seq1  GAAAGAAAGAGTTCTTTCTACTACTTAATCACCTGAGTCCTACCTACTGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAGTTCTTTCTACTACTTAATCACCTGAGTCCTACCTACTGC  449

seq1  CTCGAACTCCCAGACACCTACAACCCAGCTTTCCCCTTGCTGAGCAGAAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAACTCCCAGACACCTACAACCCAGCTTTCCCCTTGCTGAGCAGAAG  499

seq1  GTGCCTTGTTTCCAAAGCCATCCAGATGAAAACAGAAGACTCAGTTTGAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTGTTTCCAAAGCCATCCAGATGAAAACAGAAGACTCAGTTTGAG  549

seq1  AAACAAAGCTTTATGACTTGCCCATTGCTGGCTCCTACTCCCATCTTACC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGCTTTATGACTTGCCCATTGCTGGCTCCTACTCCCATCTTACC  599

seq1  CACACTGGTGAGGTCAACTCTTCACATTATTTTTTCTTCTTGCTAATGTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGGTGAGGTCAACTCTTCACATTATTTTTTCTTCTTGCTAATGTC  649

seq1  TATACTGTCATTCTCCCTCCCTTTGCTTGTGAATTCATACCTACTCTTTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGTCATTCTCCCTCCCTTTGCTTGTGAATTCATACCTACTCTTTG  699

seq1  ACCCCCGACTTTAATATTTCTTCCAACCACACCTGCAGACTTTCATCTTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCGACTTTAATATTTCTTCCAACCACACCTGCAGACTTTCATCTTA  749

seq1  TTTGAACACAGGAATGAATTC  767
      |||||||||||||||||||||
seq2  TTTGAACACAGGAATGAATTC  770


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