BAC Information

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BAC

Clone NameB6Ng01-306A13
Chromosome10 (Build37)
Map Location 114,913,189 - 114,914,041
singlet/doubletsinglet
Overlap geneLgr5
Upstream geneTrhde, 4930473D10Rik, Tph2, Tbc1d15, LOC668041, Rab21, Tmem19, Thap2, Ccdc131
Downstream geneA930009A15Rik, LOC668071, EG668073, Tspan8, Ptprr, 4933416C03Rik, Ptprb, Kcnmb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306A13.bB6Ng01-306A13.g
ACCGA099174GA099175
length319854
definitionB6Ng01-306A13.b B6Ng01-306A13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atctgggattcttccaggtatggtcactggggtttctgaatagagtgttt
ctctaggtattggaagatgataggcgtagaaatgggctaggaggctcagg
agatccacagaaggaggaaaatagggtgttccacacagatctgctaagtt
ccctaataactggggtaaagagtgaggagaggacacaacaggcgctatgc
tacagaactggggaagagaccggaggatcggatttagaagagagcaggga
gaggtaaagatcttgaagggaatttctgctgaggttagggatgagataaa
gtggtaagtgggggaaagg
gaattcagagtagaaatgtgttaatatccccttaaatttatttatttttc
ccagacttagatctttgttttaataaataaataaatcaaaaatttgtttt
tggtttcaggtgagacctatgtgacatttattcaaagtcttaaaaaattt
tttttaaagatttatttattttatgtatgtgagcacactgttgctgttgc
tagcttcagacacaccagaagagggcatagaattcaatcacagatggttg
tgagccaccatgtggttgctgggatttgaacttaggaccttcagaagagc
agtcagtgctcttaactgctgagccatctctccagccctattcaaagtct
tttacatgacaaggatgagagcggggatggagagaaccaaaagatggatg
ggtccacaccctcaaacgagtatatgctacggaagaagagatggttaacc
aacgtcagcaacgcagtggacagggagagaccaaaagaagcatttttgct
cctcagtaaggtttgccgtcataaacagctggccaagacctgtaagtgga
ggcttagcagccagccagcatgtgtggtgttataccagaaggtggtaggg
cctgtgagaggcggggtctagtggagggaagctaggtcactgagccttgt
ccttggaggagctatagggtccccagcccttcctgtttcgctttatgttt
cctagctgctatgaggtgagcatctttggtctaccgtgtagacctactct
tcacgatgctctgctttaccatggatccagagcagtgagatcaataactg
tggaaggaaattgcaagctcaaatgcacctttcttccctttaaagtagtt
agtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_114913189_114914041
seq2: B6Ng01-306A13.g_68_921

seq1  GAATTCAGAGTAGAAATGTGTTAATATCCCCTTAAATTTATTTATTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGTAGAAATGTGTTAATATCCCCTTAAATTTATTTATTTTTC  50

seq1  CCAGACTTAGATCTTTGTTTTAATAAATAAATAAATCAAAAATTTGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTTAGATCTTTGTTTTAATAAATAAATAAATCAAAAATTTGTTTT  100

seq1  TGGTTTCAGGTGAGACCTATGTGACATTTATTCAAAGTCTTAAAAAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCAGGTGAGACCTATGTGACATTTATTCAAAGTCTTAAAAAATTT  150

seq1  TTTTTAAAGATTTATTTATTTTATGTATGTGAGCACACTGTTGCTGTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAGATTTATTTATTTTATGTATGTGAGCACACTGTTGCTGTTGC  200

seq1  TAGCTTCAGACACACCAGAAGAGGGCATAGAATTCAATCACAGATGGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCAGACACACCAGAAGAGGGCATAGAATTCAATCACAGATGGTTG  250

seq1  TGAGCCACCATGTGGTTGCTGGGATTTGAACTTAGGACCTTCAGAAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCACCATGTGGTTGCTGGGATTTGAACTTAGGACCTTCAGAAGAGC  300

seq1  AGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCTATTCAAAGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCTATTCAAAGTCT  350

seq1  TTTACATGACAAGGATGAGAGCGGGGATGGAGAGAACCAAAAGATGGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATGACAAGGATGAGAGCGGGGATGGAGAGAACCAAAAGATGGATG  400

seq1  GGTCCACACCCTCAAACGAGTATATGCTACGGAAGAAGAGATGGTTAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCACACCCTCAAACGAGTATATGCTACGGAAGAAGAGATGGTTAACC  450

seq1  AACGTCAGCAACGCAGTGGACAGGGAGAGACCAAAAGAAGCATTTTTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTCAGCAACGCAGTGGACAGGGAGAGACCAAAAGAAGCATTTTTGCT  500

seq1  CCTCAGTAAGGTTTGCCGTCATAAACAGCTGGCCAAGACCTGTAAGTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTAAGGTTTGCCGTCATAAACAGCTGGCCAAGACCTGTAAGTGGA  550

seq1  GGCTTAGCAGCCAGCCAGCATGTGTGGTGTTATACCAGAAGGTGGTAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGCAGCCAGCCAGCATGTGTGGTGTTATACCAGAAGGTGGTAGGG  600

seq1  CCTGTGAGAGGCGGGGTCTAGTGGAGGGAAGCTAGGTCACTGAGCCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAGAGGCGGGGTCTAGTGGAGGGAAGCTAGGTCACTGAGCCTTGT  650

seq1  CCTTGGAGGAGCTATAGGGTCCCCAGCCCTTCCTGTTTCGCTTTATGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGAGGAGCTATAGGGTCCCCAGCCCTTCCTGTTTCGCTTTATGTTT  700

seq1  CCTAGCTGCTATGAGGTGAGCATCTTTGGTCTACCGTGTAGACCTACTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTGCTATGAGGTGAGCATCTTTGGTCTACCGTGTAGACCTACTCT  750

seq1  TCACGATGCTCTGCTTTACCATGGATCCAGAGCAGTGAGATCAATAACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGATGCTCTGCTTTACCATGGATCCAGAGCAGTGAGATCAATAACTG  800

seq1  TGGAAGGAAATTGCAAGCTCAAATGCACCTTTCTTCCCTTT-AAGTAGTT  849
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGGAAGGAAATTGCAAGCTCAAATGCACCTTTCTTCCCTTTAAAGTAGTT  850

seq1  AGTC  853
      ||||
seq2  AGTC  854