BAC Information

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BAC

Clone NameB6Ng01-306K22
Chromosome10 (Build37)
Map Location 98,167,673 - 98,282,350
singlet/doubletdoublet
Overlap genenone
Upstream geneEG667438, EG432494
Downstream geneAtp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502, Csl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306K22.bB6Ng01-306K22.g
ACCGA099648GA099649
length5681,075
definitionB6Ng01-306K22.b B6Ng01-306K22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,281,777 - 98,282,350)(98,167,673 - 98,168,766)
sequence
attactatgagtgcggaatttaaagtgcctggaaacctgcagcagtcaga
cctgcagaacacacaatagtgaaatagaaaacccgagctttgtaactaga
gacgaagcttcaccactgagctgggtcaaacacaccaggcatgtcactag
cctcagcttcattgttctcattaacaaattaaaggcaaattaaaaataaa
aaatacaggtatggaaaataaagtccaaagtttagagaaactttgtgaat
attctaaaacctttggattctgtagctttgttttgtactacagagattcg
gaagggagagaatggattaaaaaagagtgaacactgacattctgcaaaac
tactgttaaaatttaggcaagtatttattaagacgattttctgcatatat
atacatatatatatgtatacatatatatatgtatatatgaagctgtagaa
ttatgtatatatctaatatattgatgaagacacagaatgaattacataca
tatctaatatgatatatatataaatttctctttctatataagtgtgtgtg
tgtgtgtttgtgtgtgtg

gaattcctaccaggagcaaggcagacagactgtggaaagcagctttgaga
tagatccactcgatctggaagttgccagaaattgaggaaacacactacga
agccctacgatcgtattgaaatacctagagaaaactcatgatcatataat
ctcaccaactgaatccagactgggttgatacagaaacttgaaaagaaaag
aaaaaatcatcactgcattttaaaattcattctttaaggtctccaaaaca
tttaccatccaaatacacagaactgaaagtaaagacggggaagagttcta
aagtcagtccctgatatctgcccaaaataaatgtgaatcaattcgtgctt
agtagctctaagtagaggctctggacatctcagaagctctgatctttgtc
tgtctctactattatttcaaccatgtaatggtctcttcttccatcagagt
acttagtagcaagctttaagaactttctgtttgctacccttccccaaggt
ctctctctctgctgctcttgagcaaatcttgttcttagctttgcttttca
gaattatatctttagaaatgaagctggggtaagcatccttgtatctggtt
cttctgtttctttaactcagaatcatggggactgaactgctgggtcattg
tgaagtttttagtggttttaaaaaaccgaacccttattgtttaaaagttt
aaaattttttttatttattttatgtttattagtgtgttgtgcacatgtgt
gtgtgtgtgctctacttgtgtgcccggtgcctacagaggtcagaagaggt
gtcaaacctgggaactagaattacagacgtctgtaaatcagcatgtggga
gctgggaagcaaatctaacaagaatatccagtgccctaaacttctgacca
gctctccaccccaaaaccttgctttaaatttgattcttttgtgttttcag
tatttgcagattgctacaacatacatgagatattttttttctcagatccc
actattagcagctattatcttctccacatcacatgggaacacaagaaagg
tcatccattttataaaatagattcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98281777_98282350
seq2: B6Ng01-306K22.b_45_618 (reverse)

seq1  CACACACACAAACACACACACACACACTTATATAGAAAGAGAAATTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACAAACACACACACACACACTTATATAGAAAGAGAAATTTATA  50

seq1  TATATATCATATTAGATATGTATGTAATTCATTCTGTGTCTTCATCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATCATATTAGATATGTATGTAATTCATTCTGTGTCTTCATCAATA  100

seq1  TATTAGATATATACATAATTCTACAGCTTCATATATACATATATATATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGATATATACATAATTCTACAGCTTCATATATACATATATATATGT  150

seq1  ATACATATATATATGTATATATATGCAGAAAATCGTCTTAATAAATACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATATATATGTATATATATGCAGAAAATCGTCTTAATAAATACTT  200

seq1  GCCTAAATTTTAACAGTAGTTTTGCAGAATGTCAGTGTTCACTCTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAATTTTAACAGTAGTTTTGCAGAATGTCAGTGTTCACTCTTTTTT  250

seq1  AATCCATTCTCTCCCTTCCGAATCTCTGTAGTACAAAACAAAGCTACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATTCTCTCCCTTCCGAATCTCTGTAGTACAAAACAAAGCTACAGA  300

seq1  ATCCAAAGGTTTTAGAATATTCACAAAGTTTCTCTAAACTTTGGACTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAAGGTTTTAGAATATTCACAAAGTTTCTCTAAACTTTGGACTTTA  350

seq1  TTTTCCATACCTGTATTTTTTATTTTTAATTTGCCTTTAATTTGTTAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATACCTGTATTTTTTATTTTTAATTTGCCTTTAATTTGTTAATG  400

seq1  AGAACAATGAAGCTGAGGCTAGTGACATGCCTGGTGTGTTTGACCCAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAATGAAGCTGAGGCTAGTGACATGCCTGGTGTGTTTGACCCAGCT  450

seq1  CAGTGGTGAAGCTTCGTCTCTAGTTACAAAGCTCGGGTTTTCTATTTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTGAAGCTTCGTCTCTAGTTACAAAGCTCGGGTTTTCTATTTCAC  500

seq1  TATTGTGTGTTCTGCAGGTCTGACTGCTGCAGGTTTCCAGGCACTTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGTGTTCTGCAGGTCTGACTGCTGCAGGTTTCCAGGCACTTTAAA  550

seq1  TTCCGCACTCATAGTAATGAATTC  574
      ||||||||||||||||||||||||
seq2  TTCCGCACTCATAGTAATGAATTC  574


seq1: chr10_98167673_98168766
seq2: B6Ng01-306K22.g_66_1140

seq1  GAATTCCTACCAGGAGCAAGGCAGACAGACTGTGGAAAGCAGCTTTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACCAGGAGCAAGGCAGACAGACTGTGGAAAGCAGCTTTGAGA  50

seq1  TAGATCCACTCGATCTGGAAGTTGCCAGAAATTGAGGAAACACACTACGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCCACTCGATCTGGAAGTTGCCAGAAATTGAGGAAACACACTACGA  100

seq1  AGCCCTACGATCGTATTGAAATACCTAGAGAAAACTCATGATCATATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTACGATCGTATTGAAATACCTAGAGAAAACTCATGATCATATAAT  150

seq1  CTCACCAACTGAATCCAGACTGGGTTGATACAGAAACTTGAAAAGAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCAACTGAATCCAGACTGGGTTGATACAGAAACTTGAAAAGAAAAG  200

seq1  AAAAAATCATCACTGCATTTTAAAATTCATTCTTTAAGGTCTCCAAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCATCACTGCATTTTAAAATTCATTCTTTAAGGTCTCCAAAACA  250

seq1  TTTACCATCCAAATACACAGAACTGAAAGTAAAGACGGGGAAGAGTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCATCCAAATACACAGAACTGAAAGTAAAGACGGGGAAGAGTTCTA  300

seq1  AAGTCAGTCCCTGATATCTGCCCAAAATAAATGTGAATCAATTCGTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGTCCCTGATATCTGCCCAAAATAAATGTGAATCAATTCGTGCTT  350

seq1  AGTAGCTCTAAGTAGAGGCTCTGGACATCTCAGAAGCTCTGATCTTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTCTAAGTAGAGGCTCTGGACATCTCAGAAGCTCTGATCTTTGTC  400

seq1  TGTCTCTACTATTATTTCAACCATGTAATGGTCTCTTCTTCCATCAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTACTATTATTTCAACCATGTAATGGTCTCTTCTTCCATCAGAGT  450

seq1  ACTTAGTAGCAAGCTTTAAGAACTTTCTGTTTGCTACCCTTCCCCAAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTAGCAAGCTTTAAGAACTTTCTGTTTGCTACCCTTCCCCAAGGT  500

seq1  CTCTCTCTCTGCTGCTCTTGAGCAAATCTTGTTCTTAGCTTTGCTTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTGCTGCTCTTGAGCAAATCTTGTTCTTAGCTTTGCTTTTCA  550

seq1  GAATTATATCTTTAGAAATGAAGCTGGGGTAAGCATCCTTGTATCTGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATATCTTTAGAAATGAAGCTGGGGTAAGCATCCTTGTATCTGGTT  600

seq1  CTTCTGTTTCTTTAACTCAGAATCATGGGGACTGAACTGCTGGGTCATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTTTCTTTAACTCAGAATCATGGGGACTGAACTGCTGGGTCATTG  650

seq1  TGAAGTTTTTAGTGGTTTTAAAAAACCGAACCCTTATTGTTTAAAAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTTTTAGTGGTTTTAAAAAACCGAACCCTTATTGTTTAAAAGTTT  700

seq1  AAAA-TTTTTTTATTTATTTTATGTTTATTAGTGTGTTGTGCACATGTGT  749
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTTTTTATTTATTTTATGTTTATTAGTGTGTTGTGCACATGTGT  750

seq1  GTGTGTGTGCTCTACTTGTGTGCCCGGTGCCTACAGAGGTCAGAAGAGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGCTCTACTTGTGTGCCCGGTGCCTACAGAGGTCAGAAGAGGT  800

seq1  GTCAAACCTGGGAACTAGAATTACAGACGTCTGTAAATCAGCATGTGGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAACCTGGGAACTAGAATTACAGACGTCTGTAAATCAGCATGTGGGA  850

seq1  GCTGGGAAGCAAATCTAACAAGAATATCCAGTGCCCTAAACTTCTGAACC  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCTGGGAAGCAAATCTAACAAGAATATCCAGTGCCCTAAACTTCTG-ACC  899

seq1  AGCTCTCCAACCCCAAAACCTTGCTTTAAATTTGAATTCTTTTTGTGTTT  949
      |||||||| ||||||||||||||||||||||||| |||| ||||||||||
seq2  AGCTCTCC-ACCCCAAAACCTTGCTTTAAATTTG-ATTC-TTTTGTGTTT  946

seq1  TTCAAGTATTTGCAGATTGCCTACAAACAATACATGAGGATATTTTTTTT  999
      |   ||||||||||||||| ||||||   |||||||| ||||||||||||
seq2  T--CAGTATTTGCAGATTG-CTACAA--CATACATGA-GATATTTTTTTT  990

seq1  CTCCAGATTCCCACTTAATAGCAGCTATTATCTTCTCCACAATTCCACAA  1049
      || |||| |||||| || |||||||||||||||||||||||      || 
seq2  CT-CAGA-TCCCAC-TATTAGCAGCTATTATCTTCTCCACA-----TCAC  1032

seq1  ATGGGAACACAAGAAA-GTCATTCAATTTTTATAAAATAAGATTCC  1094
      |||||||||||||||| ||||| ||  ||||||||||| |||||||
seq2  ATGGGAACACAAGAAAGGTCATCCA--TTTTATAAAAT-AGATTCC  1075


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