BAC Information

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BAC

Clone NameB6Ng01-309M11
Chromosome10 (Build37)
Map Location 129,202,042 - 129,203,153
singlet/doubletsinglet
Overlap genenone
Upstream geneWibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807
Downstream geneOlfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309M11.bB6Ng01-309M11.g
ACCGA101934GA101935
length1,2181,107
definitionB6Ng01-309M11.b B6Ng01-309M11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagaagacttcagaagatagaaatatcttccaaactcatggat
tggtaggattagcatagttaaaatatccatcttaacaaaagcaattgaaa
gattcaatgcattccctatcaaaatttccaacacaatttttcacagatat
cgaaagaacaattctcaacttcatatataaaaacaaaaaacccaggatgg
tgaaaacaattctcaacaataaaagaacttttggggaaatcaccatccct
gatctcaagctctactacagaggaatggtgataaaaaacaaaaacaaaaa
acaaagaacaaaaaaattgtatggtattggtatggagacagacagatcaa
tcaagtggaatggaattgaaaaaccaaaaataaacctatacacctatgga
cattgatctttgacaaagaagtcaaaaccatacagtagaaaaagtacaat
atcttcagcaaatggtgctggtttaactagaagtctgcacgtagaagaat
tgaaattgatccatatttggtttaatgcttgtattatgttaagtgtgttc
ccaaaattgtacgagattctgcaagttaaatgcaaacaaaacagacaatc
aaatttaaaaaatggggcacagaacaaagaattctcaacagagtaatctc
aaatggctgagattcattcaacatccttagtcactgggaaatgcaaatca
aaatgaccctgagattctaccttttaccaattaggatggttaagatcaaa
aactcaaatgacagcacatgctagcaagaatatggagaaagaggaacact
cctccattgctgctgggattgcaaacttgtacaaccacgctggaaatcaa
tctggcagttcctcaaaaaattggaaatagttctacctaaagactcagct
ctaccactcctgggcatatatatttaaaagatgcttcaccttctcacaag
aatatatgttccactatgttcatagcagcccttatttgtaatagccagaa
actggaaacaacccagatgtccatcaaatgagatgaataaagaatgtgtg
ggtcatttacacaatagattttcttattcagcctactaaaaattgagaca
tagtgtggtttttttttaagcaaattggatgaacttagaaaaaataatca
ctctggacagtcattcggaaccatagtacgcccaatgaatggtaatgggt
cgggatatatatagacca
gaattccattttgtgattctcaggaaaccatgaaaggactctgagttaat
gacatgcaaggatgctgcaaaaacggtttcgtgtttcctctgcccattag
ggctatattagtaatgtcattgatgtttacctgagaaaatgcatttgact
cctttctgtggtcagtgttatacatttttaaactcagttgtcaggtttag
ggaagacataggaagaaaaaacagttacacaatttaacaaaatagcctca
tgatatgtatcaaaaggatttattgtaaaccattctaatatagaaagttg
agtaatattgttgacaaagacaaaatatacttacttttatatttgtcttg
gcatttttatacctggttttctgattatctaatatttattttaaaaaaca
acaatgattcaagtaggaaaaggttgtttcattttttaaaataatttgac
caaattaagtatttctattcagcaactcctttaacaaaatgtaagcattt
tttctaggtgtagcttgtgaaagcctatccagttctcaatccaaatcctg
atctttaagaataagaaatatcgaaacatcatatgccattgactgaataa
cttttgtaatattgttcagcaattcatatatttttaaaaatgttctgtaa
aaagaatagatgcattatgtatgtttgtgaataagatttagaagagtttg
tcctggtggaaaacataatagacacatccctagagaaagaaaaactagtg
tgtctacaattaattaatttgggcaacattttcatcaaattcctttgaga
accattaggtactggaagatgttgaattctatgtataatgccagacatcc
tatgaaccaaaggaaagactgatgaaacaattactgcctgctgagtaatt
gtttaaattatccttccaattattctgtatgttttagaattggtttgggt
ttggtttttagctatttgtatctttttggttcccatattaaatataagat
ttaaaatttatatcaaatttgcaattgaaatagatggcactgcaattgga
atttctgtattagctttgggtaaatacccatttttacattaatcaccttg
aggcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129202042_129203153
seq2: B6Ng01-309M11.g_68_1174 (reverse)

seq1  TATG-CTCAAGGTGATTAATGTAAAAATGGTTATTTTACCAAAAGCTTAT  49
      |||| ||||||||||||||||||||||||| || |||||| ||||| || 
seq2  TATGCCTCAAGGTGATTAATGTAAAAATGGGTA-TTTACCCAAAGC-TAA  48

seq1  TACAGAAATT-CAATGCAATTCCCATCTAATTTCAAATGCAATTTTAATA  98
      |||||||||| ||||   | | |||||| ||||||| ||||| ||| |||
seq2  TACAGAAATTCCAATTGCAGTGCCATCT-ATTTCAATTGCAAATTTGATA  97

seq1  TAAATTTTAAAATTCTTAATATTAATATGGGAACCAAAAAAGATACAAAA  148
      |||||||||||  |||||   |||||||||||||| |||||||||| |||
seq2  TAAATTTTAAA--TCTTATATTTAATATGGGAACC-AAAAAGATAC-AAA  143

seq1  TAGCTAAAAACCAAAACCAAACCAATTCTAAAACATACAGAATAATTGGA  198
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TAGCTAAAAACCAAACCCAAACCAATTCTAAAACATACAGAATAATTGGA  193

seq1  AGGATAATTTAAACAATTACTCAGCAGGCAGTAATTGTTTCATCAGTCTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAATTTAAACAATTACTCAGCAGGCAGTAATTGTTTCATCAGTCTT  243

seq1  TCCTTTGGTTCATAGGATGTCTGGCATTATACATAGAATTCAACATCTTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGGTTCATAGGATGTCTGGCATTATACATAGAATTCAACATCTTC  293

seq1  CAGTACCTAATGGTTCTCAAAGGAATTTGATGAAAATGTTGCCCAAATTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACCTAATGGTTCTCAAAGGAATTTGATGAAAATGTTGCCCAAATTA  343

seq1  ATTAATTGTAGACACACTAGTTTTTCTTTCTCTAGGGATGTGTCTATTAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTGTAGACACACTAGTTTTTCTTTCTCTAGGGATGTGTCTATTAT  393

seq1  GTTTTCCACCAGGACAAACTCTTCTAAATCTTATTCACAAACATACATAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCACCAGGACAAACTCTTCTAAATCTTATTCACAAACATACATAA  443

seq1  TGCATCTATTCTTTTTACAGAACATTTTTAAAAATATATGAATTGCTGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTATTCTTTTTACAGAACATTTTTAAAAATATATGAATTGCTGAA  493

seq1  CAATATTACAAAAGTTATTCAGTCAATGGCATATGATGTTTCGATATTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTACAAAAGTTATTCAGTCAATGGCATATGATGTTTCGATATTTC  543

seq1  TTATTCTTAAAGATCAGGATTTGGATTGAGAACTGGATAGGCTTTCACAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTTAAAGATCAGGATTTGGATTGAGAACTGGATAGGCTTTCACAA  593

seq1  GCTACACCTAGAAAAAATGCTTACATTTTGTTAAAGGAGTTGCTGAATAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACACCTAGAAAAAATGCTTACATTTTGTTAAAGGAGTTGCTGAATAG  643

seq1  AAATACTTAATTTGGTCAAATTATTTTAAAAAATGAAACAACCTTTTCCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTAATTTGGTCAAATTATTTTAAAAAATGAAACAACCTTTTCCT  693

seq1  ACTTGAATCATTGTTGTTTTTTAAAATAAATATTAGATAATCAGAAAACC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAATCATTGTTGTTTTTTAAAATAAATATTAGATAATCAGAAAACC  743

seq1  AGGTATAAAAATGCCAAGACAAATATAAAAGTAAGTATATTTTGTCTTTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATAAAAATGCCAAGACAAATATAAAAGTAAGTATATTTTGTCTTTG  793

seq1  TCAACAATATTACTCAACTTTCTATATTAGAATGGTTTACAATAAATCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAATATTACTCAACTTTCTATATTAGAATGGTTTACAATAAATCCT  843

seq1  TTTGATACATATCATGAGGCTATTTTGTTAAATTGTGTAACTGTTTTTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATACATATCATGAGGCTATTTTGTTAAATTGTGTAACTGTTTTTTC  893

seq1  TTCCTATGTCTTCCCTAAACCTGACAACTGAGTTTAAAAATGTATAACAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATGTCTTCCCTAAACCTGACAACTGAGTTTAAAAATGTATAACAC  943

seq1  TGACCACAGAAAGGAGTCAAATGCATTTTCTCAGGTAAACATCAATGACA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACAGAAAGGAGTCAAATGCATTTTCTCAGGTAAACATCAATGACA  993

seq1  TTACTAATATAGCCCTAATGGGCAGAGGAAACACGAAACCGTTTTTGCAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAATATAGCCCTAATGGGCAGAGGAAACACGAAACCGTTTTTGCAG  1043

seq1  CATCCTTGCATGTCATTAACTCAGAGTCCTTTCATGGTTTCCTGAGAATC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTGCATGTCATTAACTCAGAGTCCTTTCATGGTTTCCTGAGAATC  1093

seq1  ACAAAATGGAATTC  1112
      ||||||||||||||
seq2  ACAAAATGGAATTC  1107