BAC Information

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BAC

Clone NameB6Ng01-313M16
Chromosome10 (Build37)
Map Location 29,083,600 - 29,084,463
singlet/doubletsinglet
Overlap genenone
Upstream genePtprk, E430004N04Rik, 4930519F09Rik, 2310057J18Rik, LOC432447, 6330407J23Rik, Echdc1, Rnf146
Downstream geneRspo3, EG630389, Rpl12, LOC623064, LOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313M16.bB6Ng01-313M16.g
ACCGA104904GA104905
length868866
definitionB6Ng01-313M16.b B6Ng01-313M16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggtagagattctatgaagatttatttctgggttaggaaatttt
ccataaagaaagtcctgtttgagagagcaaaaatcagacagatcataaat
atcttgcctagcccctacgtctattagggaaaagcttttttatgttgtcc
ttcagtctccctgggtgcataagaggcgcggaatatctaagtgcctggag
tcttattttgtctgcttactgaaaaacctgagacagacatgaagtatcag
aaacctaataaaattctctctcagattcagccctttcccacaaccatgtc
aaaacatgcttctgtatctttgttccaacccatctttagtttcttcctct
tttgctgcatatacactttgcaaataatttcttcgctgcctctttccatc
ttcaaaatacactcaggatcctactacgttttatgctgacttctaaacca
aacctaagtgaggtcatatcatacttctgaatacacatatacaaccacct
ttggcttaccaacacaaagacaaatcaaaagtcccccttttgtgtgtcac
cctactttatgatctcccatacctcttaatccactttctgttcctacaac
acccctactcaaactctctgcacattctttgctgagagttcccctctttt
gatcactcccataatgcattctgcgttctccctctccgtctcccccttct
ctctctctctctctctctctctctctctctgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtatgtgtgtgtgtgcgcgcgtacaaataccttt
tggcattcctcttccctgcccttgttttaaattttcatatcactcactat
catttcttattcttcctt

gaattcaacatcccaatggacatatcatgaaaacacaaaccaaacagaga
cacattgaaactattagaagttatggatgaaatggatttaacagatatcc
ctagaacattacatcctaaaacaaaagaatataccttcttctcaatacct
catgataccttctgcaaaattgaccatataatcagtcacaaaataggcct
taatagatgcaagaagattgaaataatcccatgtatcttatcagagcacc
atggactaaggctggtctttaatagcaacaaatacaaaaagcccacatac
acatggaagctgaaaaacctagtcagtgattacttggtcaaggaataaat
aaaaaataatttaaagactttagactttgccccatcttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagacaaa
agaatggaccatccagagactgccacaccgggggatccatcccataatca
gccaccaaactcagacctgttgcataagccagcaagattttgctgacagg
gccctgatatagctgtctcttgtgagactatgccagtgcctggcaaacac
agaagtggatgctcactgtcagctattgggtggaacatagggcccccaat
agaggagctagagaaagtacccaaggagctgaagcggtctgcaaccctat
aggtggaacaacaacatgtactaaccagtacccccagagctcgtgtctct
agttgcatatgttgcagaagatggcttagttggccgtcattgggaagaga
ggccccttggtcttgcaaactttatatgtcccagtacaggggaacaccag
ggccaagaagtgggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_29083600_29084463
seq2: B6Ng01-313M16.b_47_914

seq1  GAATTCAGGTAGAGATTCTATGAAGATTTATTTCTGGGTTAGGAAATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTAGAGATTCTATGAAGATTTATTTCTGGGTTAGGAAATTTT  50

seq1  CCATAAAGAAAGTCCTGTTTGAGAGAGCAAAAATCAGACAGATCATAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAGAAAGTCCTGTTTGAGAGAGCAAAAATCAGACAGATCATAAAT  100

seq1  ATCTTGCCTAGCCCCTACGTCTATTAGGGAAAAGCTTTTTTATGTTGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGCCTAGCCCCTACGTCTATTAGGGAAAAGCTTTTTTATGTTGTCC  150

seq1  TTCAGTCTCCCTGGGTGCATAAGAGGCGCGGAATATCTAAGTGCCTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCTCCCTGGGTGCATAAGAGGCGCGGAATATCTAAGTGCCTGGAG  200

seq1  TCTTATTTTGTCTGCTTACTGAAAAACCTGAGACAGACATGAAGTATCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTTGTCTGCTTACTGAAAAACCTGAGACAGACATGAAGTATCAG  250

seq1  AAACCTAATAAAATTCTCTCTCAGATTCAGCCCTTTCCCACAACCATGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTAATAAAATTCTCTCTCAGATTCAGCCCTTTCCCACAACCATGTC  300

seq1  AAAACATGCTTCTGTATCTTTGTTCCAACCCATCTTTAGTTTCTTCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGCTTCTGTATCTTTGTTCCAACCCATCTTTAGTTTCTTCCTCT  350

seq1  TTTGCTGCATATACACTTTGCAAATAATTTCTTCGCTGCCTCTTTCCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGCATATACACTTTGCAAATAATTTCTTCGCTGCCTCTTTCCATC  400

seq1  TTCAAAATACACTCAGGATCCTACTACGTTTTATGCTGACTTCTAAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATACACTCAGGATCCTACTACGTTTTATGCTGACTTCTAAACCA  450

seq1  AACCTAAGTGAGGTCATATCATACTTCTGAATACACATATACAACCACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAAGTGAGGTCATATCATACTTCTGAATACACATATACAACCACCT  500

seq1  TTGGCTTACCAACACAAAGACAAATCAAAAGTCCCCCTTTTGTGTGTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTACCAACACAAAGACAAATCAAAAGTCCCCCTTTTGTGTGTCAC  550

seq1  CCTACTTTATGATCTCCCATACCTCTTAATCCACTTTCTGTTCCTACAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTTATGATCTCCCATACCTCTTAATCCACTTTCTGTTCCTACAAC  600

seq1  ACCCCTACTCAAACTCTCTGCACATTCTTTGCTGAGAGTTCCCCTCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTACTCAAACTCTCTGCACATTCTTTGCTGAGAGTTCCCCTCTTTT  650

seq1  GATCACTCCCATAATGCATTCTGCGTTCTCCCTCTCCGTCTCCCCCTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTCCCATAATGCATTCTGCGTTCTCCCTCTCCGTCTCCCCCTTCT  700

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGT  750

seq1  GTGTGTGTGTGTGTGTGTATGTGTGTGTGTGCGCGCGCTCAAATACCTTT  800
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  GTGTGTGTGTGTGTGTGTATGTGTGTGTGTGCGCGCGTACAAATACCTTT  800

seq1  --GCATTCCTC-TCCCTGCCTCTGTTTTAAATTTTCATATCACTCACTAT  847
        ||||||||| ||||||||  ||||||||||||||||||||||||||||
seq2  TGGCATTCCTCTTCCCTGCCCTTGTTTTAAATTTTCATATCACTCACTAT  850

seq1  CATTTCTTATTC-TCCTT  864
      |||||||||||| |||||
seq2  CATTTCTTATTCTTCCTT  868


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