BAC Information

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BAC

Clone NameB6Ng01-315J14
Chromosome10 (Build37)
Map Location 21,480,344 - 21,625,324
singlet/doubletdoublet
Overlap geneLOC628133
Upstream geneLOC667202, Ahi1, Myb, LOC100039870, Hbs1l, Aldh8a1, LOC100039906, 1700020N01Rik, EG432436, LOC100039936
Downstream geneSgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1, Tcf21
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315J14.bB6Ng01-315J14.g
ACCGA106205GA106206
length1,112996
definitionB6Ng01-315J14.b B6Ng01-315J14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,624,200 - 21,625,324)(21,480,344 - 21,481,324)
sequence
gaattcctttaataatgaatagcaactatggaagtgtaagccaaagaaac
cctttcctcctcttcttgctttttggtcatgatgctttgttgcagcaata
gaaaccctaactaatacactcttcaaatgtagcctctagttttggtctct
ctgctttagatacataagtctatatgtcaccttccagacattactgatat
cttcccacctggggcatgccctgcctagaatctgtgtgtgttggccacat
tatgtctaacacctggcagatgataaacacatagttctcaatgagtacag
tatatttgaaggaaggcaggcaggaaggcaggaaggaaagaatgatttag
gacagggaggaagaagaggagttgatagtgagcccattgctgaggactgt
gggcatcagaccaagacttgtaatgaattctgtggacagtctccatttat
atcttgcacattacatattgatatgcagtgtgctgcagtgtgcgcgtgta
tgccacagtttcagagagaagaaggcaatggctttcttctagaagtccag
gagcaaataatccagccattagaacttacacaaagaacaaatccttttgt
gcaaattattcggtcttgggggctctgttactacacatttgccaagcatg
catgaaagcctaggcttgatccacagtactgcataaaacagagcgctgta
gcacatgtctacaatcccagggaagtggaccaggtcatctttagttacag
agttcaaggccagcccaagattctgtctcaaaacattaacaacaacaaca
aattttaaaagagagaaaagaaagtattcactcttagaggtaactaagtg
accttttgttactttgtagacaaaaggaaagattgcgcttacaaaacctt
taaggaatggttctcaactgtcctaagctggaaagtttcctcctgtcctg
acggccctgaaccataaaactaattcaatgctaatttataactgtaactt
tgctactctatgaatcatatgtaaatatctttgttttcatgatcttaagt
gaccctgtgaacgtctttcgactcaaaagtgtgacacaggttgaaaacag
ctgcctaaagtc
gaattctatgatctctttgtcttccgtgcccatcccccatgtcctctcag
ccacgagggggtatgtttttattctctgtctctatgcatttatcagatcg
ggatctcatgtacgtgatatcatacagcatgcagccttctgtccgttgca
tgttgagcatggtggggtatgctggcttttctgcctttattacactccat
ggcgttccatttgtacgatgcacctggtctccctaactcagcgactgagg
gacatttagattgctaccacattaccactgctatgaataatgcttcagtg
gctattcatatgaggttttgtgggaacgtgttttcaattatcctggttat
atgcttaccgctgatatttctcggtcatgcttatgtctctctgtgcttta
ttttattttggtgttttgagggagggtctcttgcaggccagcctgacttt
gaatcgactgctgagatgaacctcctattgctgttctgctatccagacac
ggcaaaatgtttttgtttatacacatagattaatgcctctcttctcttct
cttctcttctcttctcttctcttctccgtcttcatcttctttctttcttt
ctttctttctttctttctttctttctttcctcctcctcctccttcctctc
tccctctccctctctctctctctctctctctctctctctctctctctctc
tcagtgtgttccctgttgagcctatttgtcttgaaaactagctctgttag
accttgactggtccttgaatttaggagcttctcccttgagccaccatggg
caatgattcgagctgctctcagtatagtcagagaagcctctttctcactg
ggagcaatgcagagcctcatcgatagctcgagggctggagactaagtgac
tttcagagtactttattccataaggatacatttcatattcatcctccccg
gaggctcagggggaacatttgcagaagaagatgggtagaaaaacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_21624200_21625324
seq2: B6Ng01-315J14.b_49_1160 (reverse)

seq1  GACTCTTAGGCAGCTGTTTTCAACTTGTGTCACAACCTTTTTTGGAGTCG  50
      |||| ||||||||||||||||||| |||||||||  |||||   ||||||
seq2  GACT-TTAGGCAGCTGTTTTCAACCTGTGTCACA--CTTTT---GAGTCG  44

seq1  AAAGACCCTTTCACAGGGGTCACCTAAGACCATTGGAAAACAAAGATATT  100
      |||||  | |||||| ||||||| ||||| |||  |||||||||||||||
seq2  AAAGA--CGTTCACA-GGGTCACTTAAGATCAT--GAAAACAAAGATATT  89

seq1  TACATTATGATTCATAAGAGTAGCAAAGTTACAGTTATAAATTAGCATTG  150
      |||| |||||||||| ||||||||||||||||||||||||||||||||||
seq2  TACA-TATGATTCAT-AGAGTAGCAAAGTTACAGTTATAAATTAGCATTG  137

seq1  AATTAGTTTTATGGTTCAGGGCCGTCAGGACAGGAGG-AACTTTCCAGCC  199
      ||||||||||||||||||||||||||||||||||||| |||||||||| |
seq2  AATTAGTTTTATGGTTCAGGGCCGTCAGGACAGGAGGAAACTTTCCAG-C  186

seq1  TTAGGACAGTTGAGAACCATTCCTTTAAGGTTTTGTAAGCGCAATCTTTC  249
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTAGGACAGTTGAGAACCATTCCTTAAAGGTTTTGTAAGCGCAATCTTTC  236

seq1  CTTTTGTCTACAAAGTAACAAAAGGTCACTTAGTTACCTCTAAGAGTGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTCTACAAAGTAACAAAAGGTCACTTAGTTACCTCTAAGAGTGAA  286

seq1  TACTTTCTTTTCTCTCTTTTAAAATTTGTTGTTGTTGTTAATGTTTTGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCTTTTCTCTCTTTTAAAATTTGTTGTTGTTGTTAATGTTTTGAG  336

seq1  ACAGAATCTTGGGCTGGCCTTGAACTCTGTAACTAAAGATGACCTGGTCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATCTTGGGCTGGCCTTGAACTCTGTAACTAAAGATGACCTGGTCC  386

seq1  ACTTCCCTGGGATTGTAGACATGTGCTACAGCGCTCTGTTTTATGCAGTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCTGGGATTGTAGACATGTGCTACAGCGCTCTGTTTTATGCAGTA  436

seq1  CTGTGGATCAAGCCTAGGCTTTCATGCATGCTTGGCAAATGTGTAGTAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGATCAAGCCTAGGCTTTCATGCATGCTTGGCAAATGTGTAGTAAC  486

seq1  AGAGCCCCCAAGACCGAATAATTTGCACAAAAGGATTTGTTCTTTGTGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCCCCAAGACCGAATAATTTGCACAAAAGGATTTGTTCTTTGTGTA  536

seq1  AGTTCTAATGGCTGGATTATTTGCTCCTGGACTTCTAGAAGAAAGCCATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAATGGCTGGATTATTTGCTCCTGGACTTCTAGAAGAAAGCCATT  586

seq1  GCCTTCTTCTCTCTGAAACTGTGGCATACACGCGCACACTGCAGCACACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTTCTCTCTGAAACTGTGGCATACACGCGCACACTGCAGCACACT  636

seq1  GCATATCAATATGTAATGTGCAAGATATAAATGGAGACTGTCCACAGAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATCAATATGTAATGTGCAAGATATAAATGGAGACTGTCCACAGAAT  686

seq1  TCATTACAAGTCTTGGTCTGATGCCCACAGTCCTCAGCAATGGGCTCACT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACAAGTCTTGGTCTGATGCCCACAGTCCTCAGCAATGGGCTCACT  736

seq1  ATCAACTCCTCTTCTTCCTCCCTGTCCTAAATCATTCTTTCCTTCCTGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTCCTCTTCTTCCTCCCTGTCCTAAATCATTCTTTCCTTCCTGCC  786

seq1  TTCCTGCCTGCCTTCCTTCAAATATACTGTACTCATTGAGAACTATGTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCCTGCCTTCCTTCAAATATACTGTACTCATTGAGAACTATGTGT  836

seq1  TTATCATCTGCCAGGTGTTAGACATAATGTGGCCAACACACACAGATTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATCTGCCAGGTGTTAGACATAATGTGGCCAACACACACAGATTCT  886

seq1  AGGCAGGGCATGCCCCAGGTGGGAAGATATCAGTAATGTCTGGAAGGTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGCATGCCCCAGGTGGGAAGATATCAGTAATGTCTGGAAGGTGA  936

seq1  CATATAGACTTATGTATCTAAAGCAGAGAGACCAAAACTAGAGGCTACAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAGACTTATGTATCTAAAGCAGAGAGACCAAAACTAGAGGCTACAT  986

seq1  TTGAAGAGTGTATTAGTTAGGGTTTCTATTGCTGCAACAAAGCATCATGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAGTGTATTAGTTAGGGTTTCTATTGCTGCAACAAAGCATCATGA  1036

seq1  CCAAAAAGCAAGAAGAGGAGGAAAGGGTTTCTTTGGCTTACACTTCCATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAGCAAGAAGAGGAGGAAAGGGTTTCTTTGGCTTACACTTCCATA  1086

seq1  GTTGCTATTCATTATTAAAGGAATTC  1125
      ||||||||||||||||||||||||||
seq2  GTTGCTATTCATTATTAAAGGAATTC  1112

seq1: chr10_21480344_21481324
seq2: B6Ng01-315J14.g_66_1061

seq1  GAATTCTATGATCTCTTTGTCTTCCGTGCCCATCCCCCATGTCCTCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGATCTCTTTGTCTTCCGTGCCCATCCCCCATGTCCTCTCAG  50

seq1  CCACGAGGGGGTATGTTTTTATTCTCTGTCTCTATGCATTTATCAGATCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGAGGGGGTATGTTTTTATTCTCTGTCTCTATGCATTTATCAGATCG  100

seq1  GGATCTCATGTACGTGATATCATACAGCATGCAGCCTTCTGTCCGTTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCATGTACGTGATATCATACAGCATGCAGCCTTCTGTCCGTTGCA  150

seq1  TGTTGAGCATGGTGGGGTATGCTGGCTTTTCTGCCTTTATTACACTCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGCATGGTGGGGTATGCTGGCTTTTCTGCCTTTATTACACTCCAT  200

seq1  GGCGTTCCATTTGTACGATGCACCTGGTCTCCCTAACTCAGCGACTGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTTCCATTTGTACGATGCACCTGGTCTCCCTAACTCAGCGACTGAGG  250

seq1  GACATTTAGATTGCTACCACATTACCACTGCTATGAATAATGCTTCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTAGATTGCTACCACATTACCACTGCTATGAATAATGCTTCAGTG  300

seq1  GCTATTCATATGAGGTTTTGTGGGAACGTGTTTTCAATTATCCTGGTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTCATATGAGGTTTTGTGGGAACGTGTTTTCAATTATCCTGGTTAT  350

seq1  ATGCTTACCGCTGATATTTCTCGGTCATGCTTATGTCTCTCTGTGCTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTACCGCTGATATTTCTCGGTCATGCTTATGTCTCTCTGTGCTTTA  400

seq1  TTTTATTTTGGTGTTTTGAGGGAGGGTCTCTTGCAGGCCAGCCTGACTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTGGTGTTTTGAGGGAGGGTCTCTTGCAGGCCAGCCTGACTTT  450

seq1  GAATCGACTGCTGAGATGAACCTCCTATTGCTGTTCTGCTATCCAGACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCGACTGCTGAGATGAACCTCCTATTGCTGTTCTGCTATCCAGACAC  500

seq1  GGCAAAATGTTTTTGTTTATACACATAGATTAATGCCTCTCTTCTCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAATGTTTTTGTTTATACACATAGATTAATGCCTCTCTTCTCTTCT  550

seq1  CTTCTCTTCTCTTCTCTTCTCTTCTCCGTCTTCATCTTCTTTCTTTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTTCTCTTCTCTTCTCTTCTCCGTCTTCATCTTCTTTCTTTCTTT  600

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTCCTCCTCCTCCTTCCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTCCTCCTCCTCCTTCCTCTC  650

seq1  TCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  700

seq1  TCAGTGGTTTCCCTGTTTAGCCTAGTTGTCCTG-AAACTAGCTCTG-TAG  748
      ||||||  ||||||||| |||||| ||||| || |||||||||||| |||
seq2  TCAGTGTGTTCCCTGTTGAGCCTATTTGTCTTGAAAACTAGCTCTGTTAG  750

seq1  ACC-TGACTGG-CCTTGAATTTAGGAGC-TCACCC-TGAGCCACCATGGG  794
      ||| ||||||| |||||||||||||||| || ||| ||||||||||||||
seq2  ACCTTGACTGGTCCTTGAATTTAGGAGCTTCTCCCTTGAGCCACCATGGG  800

seq1  CAATGATTCGAGCTGCTCTCAAGTATAGTCAGAGAAGCCTCTTTCTCACT  844
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CAATGATTCGAGCTGCTCTC-AGTATAGTCAGAGAAGCCTCTTTCTCACT  849

seq1  GGGTAGCAATGCAGAGCCTCATCGATAGCTCGAGTGCT-GAGACTAAGTG  893
      ||| |||||||||||||||||||||||||||||| ||| |||||||||||
seq2  GGG-AGCAATGCAGAGCCTCATCGATAGCTCGAGGGCTGGAGACTAAGTG  898

seq1  AC-TTCAGAGTAC-TTATTCCTAAAGGATACA-TTCATATCAGTCCTCCC  940
      || |||||||||| |||||||  ||||||||| |||||||   |||||||
seq2  ACTTTCAGAGTACTTTATTCCATAAGGATACATTTCATATTCATCCTCCC  948

seq1  --GAGGCTCAGGGG--ACA-TTGCAGAAG-AGA-GGGTAGAAAAACAA  981
        ||||||||||||  ||| ||||||||| ||| ||||||||||||||
seq2  CGGAGGCTCAGGGGGAACATTTGCAGAAGAAGATGGGTAGAAAAACAA  996