BAC Information

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BAC

Clone NameB6Ng01-316O04
Chromosome10 (Build37)
Map Location 76,000,887 - 76,002,007
singlet/doubletsinglet
Overlap geneLss
Upstream geneAI646023, Ggt1, Ggtla1, Susd2, Cabin1, Ddt, Gstt3, Gstt1, Gstt4, Gstt2, Mif, Derl3, Smarcb1, Mmp11, Ndg2, Gm867, Vpreb3, EG333669, Suhw2, Slc5a4b, Slc5a4a, LOC100040150, Prmt2, S100b, Dip2a, Pcnt, 2610028H24Rik, A130042E20Rik, Mcm3ap
Downstream gene1700027D21Rik, Ftcd, Col6a2, Col6a1, Pcbp3, LOC100041099, Slc19a1, Col18a1, LOC665762, Pofut2, Adarb1, 1810008A18Rik, Itgb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316O04.g
ACCGA107170
length1,121
definitionB6Ng01-316O04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtctttcggcatgtgaaagttacagcacaggaaccctcaactc
tgtcttcaagaggacagctggctctgcatgaactctgtatagttctgggg
atcttaccgcccagtatgtgtaatctgggggtcaattacatatgtattac
acatggcaccaatgcttttataagatattcacaaaatagaaaaagacact
gagcatagggtcagttagtaaggaataggctttgactctgctgggtaaat
attagtaaagaaagaaaaatttagccgggcgtggtagcgcacgcctttaa
tcccagcactcaggaggcagaggcaggtggatttctgagttcaaggccag
tctggtctacaaagtgagttccaggacaggcagggctacacagagaaacc
ctgtctcgaaaaacaaaaaaaaaaatttaaagatgcacatgtaaatgctc
attggtgaaataatatctaggacttcccaaacatttaccataaattagtt
aagaaaaagagatacagggatgggagaggccctttcctttactcctatat
atactccaaggttttgtaattacctggtatgatctgttgtctattcccac
aaagcccaagccacacaatgggttctgtaattatcctacagggcttcaca
gcctgctacagagctgggtggtctgatgccttgcttttgcctaaaagagt
cccctttctatatatctacagaacacatcagggcctctagtgagatgctg
atccaccccatgaggtctcatccatgtactagaaggaagtgcaatgggca
gagggcaggcataccacatctcagggaatagggtgttgagtccttcccag
ctataaacattcaaggacagccagccagaaacttcccccaggaagggatg
gccaccgcaccacctgcaaagaggaggaggacaattacaatgatactggc
cttgcagctttctcttgggcccttccttgcatgaacgaagttcagccttc
catggtctgtaactcatagatgaaacacattttcacagcttgccaagaca
cccacagccactgggtagaaacagccagccagaacagtgtgttccaaacc
tgccaaagagctgttatagcc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_76000887_76002007
seq2: B6Ng01-316O04.g_68_1188 (reverse)

seq1  GGCTATAAACAGCTCTTT-GCA-GTTTGG-ACACACTTGTTCCTGGCT-G  46
      |||||| ||||||||||| ||| |||||| |||||| |||| |||||| |
seq2  GGCTAT-AACAGCTCTTTGGCAGGTTTGGAACACAC-TGTT-CTGGCTGG  47

seq1  CTGTTTCTACCCAGTGGCTGT-GGTGTCTTGGGCAGCTGTGGAAAATGTG  95
      ||||||||||||||||||||| ||||||||||  |||||| |||||||||
seq2  CTGTTTCTACCCAGTGGCTGTGGGTGTCTTGGCAAGCTGT-GAAAATGTG  96

seq1  TTCTCATCTATGAGTTACAGGACCCATGGAAGGCTGAACTTCGTTCATGC  145
      || |||||||||||||||||   |||||||||||||||||||||||||||
seq2  TT-TCATCTATGAGTTACAG--ACCATGGAAGGCTGAACTTCGTTCATGC  143

seq1  AAGGAGGGGCCCAAGAGAAAGCTGCAA-GCCAGTATTCATTGTAATTGTT  194
      ||||| ||||||||||||||||||||| ||||||| |||||||||||| |
seq2  AAGGAAGGGCCCAAGAGAAAGCTGCAAGGCCAGTA-TCATTGTAATTG-T  191

seq1  CCTTCT-CTCTTTGCAGGTGGTGCGGTGGCCATCCCTTCCTGGGGGAAG-  242
      ||| || |||||||||||||||||||||||||||||||||||||||||| 
seq2  CCTCCTCCTCTTTGCAGGTGGTGCGGTGGCCATCCCTTCCTGGGGGAAGT  241

seq1  TTCTGGCTGGCTGTCC-TGAATGTTTATAGCTGGGAAGGACTCAACACCC  291
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTCTGGCTGGCTGTCCTTGAATGTTTATAGCTGGGAAGGACTCAACACCC  291

seq1  TATTCCCTGAGATGTGGTATGCCTGCCCTCTGCCCATTGCACTTCCTTCT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCCTGAGATGTGGTATGCCTGCCCTCTGCCCATTGCACTTCCTTCT  341

seq1  AGTACATGGATGAGACCTCATGGGGTGGATCAGCATCTCACTAGAGGCCC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATGGATGAGACCTCATGGGGTGGATCAGCATCTCACTAGAGGCCC  391

seq1  TGATGTGTTCTGTAGATATATAGAAAGGGGACTCTTTTAGGCAAAAGCAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGTTCTGTAGATATATAGAAAGGGGACTCTTTTAGGCAAAAGCAA  441

seq1  GGCATCAGACCACCCAGCTCTGTAGCAGGCTGTGAAGCCCTGTAGGATAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAGACCACCCAGCTCTGTAGCAGGCTGTGAAGCCCTGTAGGATAA  491

seq1  TTACAGAACCCATTGTGTGGCTTGGGCTTTGTGGGAATAGACAACAGATC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAACCCATTGTGTGGCTTGGGCTTTGTGGGAATAGACAACAGATC  541

seq1  ATACCAGGTAATTACAAAACCTTGGAGTATATATAGGAGTAAAGGAAAGG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGGTAATTACAAAACCTTGGAGTATATATAGGAGTAAAGGAAAGG  591

seq1  GCCTCTCCCATCCCTGTATCTCTTTTTCTTAACTAATTTATGGTAAATGT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCCCATCCCTGTATCTCTTTTTCTTAACTAATTTATGGTAAATGT  641

seq1  TTGGGAAGTCCTAGATATTATTTCACCAATGAGCATTTACATGTGCATCT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAGTCCTAGATATTATTTCACCAATGAGCATTTACATGTGCATCT  691

seq1  TTAAATTTTTTTTTTTGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTTTTTTTTTGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTG  741

seq1  CCTGTCCTGGAACTCACTTTGTAGACCAGACTGGCCTTGAACTCAGAAAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCTGGAACTCACTTTGTAGACCAGACTGGCCTTGAACTCAGAAAT  791

seq1  CCACCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGCGTGCGCTACCAC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGCGTGCGCTACCAC  841

seq1  GCCCGGCTAAATTTTTCTTTCTTTACTAATATTTACCCAGCAGAGTCAAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGGCTAAATTTTTCTTTCTTTACTAATATTTACCCAGCAGAGTCAAA  891

seq1  GCCTATTCCTTACTAACTGACCCTATGCTCAGTGTCTTTTTCTATTTTGT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATTCCTTACTAACTGACCCTATGCTCAGTGTCTTTTTCTATTTTGT  941

seq1  GAATATCTTATAAAAGCATTGGTGCCATGTGTAATACATATGTAATTGAC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCTTATAAAAGCATTGGTGCCATGTGTAATACATATGTAATTGAC  991

seq1  CCCCAGATTACACATACTGGGCGGTAAGATCCCCAGAACTATACAGAGTT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGATTACACATACTGGGCGGTAAGATCCCCAGAACTATACAGAGTT  1041

seq1  CATGCAGAGCCAGCTGTCCTCTTGAAGACAGAGTTGAGGGTTCCTGTGCT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGAGCCAGCTGTCCTCTTGAAGACAGAGTTGAGGGTTCCTGTGCT  1091

seq1  GTAACTTTCACATGCCGAAAGACAGAATTC  1121
      ||||||||||||||||||||||||||||||
seq2  GTAACTTTCACATGCCGAAAGACAGAATTC  1121