BAC Information

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BAC

Clone NameB6Ng01-321D16
Chromosome10 (Build37)
Map Location 67,578,138 - 67,697,614
singlet/doubletdoublet
Overlap geneArid5b
Upstream geneJmjd1c, Nrbf2, Egr2, Gm237, LOC100040081, LOC100039618, Zfp365, Plekhk1
Downstream geneLOC100040136, 1700040L02Rik, EG665342, Tmem26, A930033H14Rik, Rhobtb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321D16.bB6Ng01-321D16.g
ACCGA110393GA110394
length1,1931,206
definitionB6Ng01-321D16.b B6Ng01-321D16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,578,138 - 67,579,330)(67,696,398 - 67,697,614)
sequence
gaattctccctgttgacaattcaacatggcttccagtctaccactcacag
tctcctaactcaaacgctgacctaagaagttccagaactggaagaatatt
ttatacctcttgaaaaatgtaatccaatgggagaccaaaactttacagaa
tgtctagtctgatgctacaaattcagaaaatgaaaagaaacatttaaaac
atttcgcaatgggctgcggttgctagggctttccaaatggacagttttac
atcattcaggaatctactgcaccttaggaaagggaggtcattcatcgagg
tacaaccagagtatctgagcattccagtcaagactgtgtcactgacaaaa
cctctgaaggaaaacacacccaagggctggagacacagcacagcatttaa
gaacaccagttgctcttccagaagttgttcagtggccggcaatcacgtgg
tcactcttaactatccataactcctgttctaggggatctaactccatctt
ctggcctctgtaggctcctccacacatgtaagaggcaaagtacccatgca
cctcattaaagaaaaatgaaacacacacacacacacacacacacacacac
acacatacacacacacacatacacacatcctatattcattcgatccttct
caatccttctctctaacccagttcttgcctgctcttgatcatatgctgtg
ttgtaaaatgtagttaatgactatgcccatttgtcgaggaagtgggctag
ctgcagctatgtgagtccttttgccagttttatctgtcattgggtcccct
taagattaatggttcgggtgctgggaactttttggagaggagagagtatg
tttttatgtctctcatgccatgatttgattagaggctcctaagccaaaga
taagtaggttatggtagcctccagcactgtgggcaaagctctcatcccag
gaggcattgtattggggatcagctgcctggtacagcgggtaacaggaatg
tgtgagctttgatgttaagtactgagagaaatcacagttaatatttatat
atatatgaaacagtgctaccagagtggttaattggaacatctattatgat
gttaagaattctttccagaatacaataggtcagggccatctctcttggga
tgctcaaggatttcacaaggaactaaaccccaactctcaattt

gaattctttgtgaggttgtccaggtggaagaggttggtccagttaacatt
tcttcccccttcagttctgacggtctttagagttctctctctatttagct
aaacaaccccaaatgttttcaattctttctccggatgtggtttttgagct
tcttcaccatcctggttattcatttgaggacgcatctctagtgtttatat
tacggtggtttactcatttatattgtgaggtactgctttgctaagaatcc
tccagccagagtcaaagtggcttccaggcatagaaagactgcagtctggt
catcacgtatggtcagatttccaacagctggctatgctctgctgtttcca
gagatgctgtgaccctagtgaggtttagttctcagtcttgccttttccac
tcctctgagacataaacattatttctctaccaccacctcctcctctcgtt
tactgcccacttttgagttgattctcctttctatgtaatgccaagttcgg
gctgttacttaataaacatcactatttatgaatcctcaacatgccgtttg
ggaaatatttccaacagctgacgtccctgtgacagcacaccacaaagtgt
aaagtgtgacctggacaagctgggttttacctcagtaaggatccatgtgt
gacgggcagccccacctctggctttatttcacctacttcaacagagccat
cggagtatggtgggtcctcttcatcttgccaagcgtggcagtttagctca
catcaaccacctttctgaattctgatgtccttgtgtttgcattttgtcca
acctgtcggcatttctgggttttacttttcactggtaccttttcacgaat
caaattctttgtggctatttctcccataaaaccacgatgggggaaggaaa
ccagctcgtatttttgttctggcttcattcgtgagacatggtaatttcac
aatgactgactgtggaatggtcagctgatgggaaaatgaagaaagattcg
ctgtccttgaactccgtctcttgactccctttgttcttcttatacctact
ttggggagacctttgcctgatacgagcctcatacatcccagatgaagaca
aaccttcaactgggattggtgatggccagttccttggtgacagcattagc
ttgtcctaggacaaaagttttgagagagaatctatttggcctctgtaatt
tcagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_67578138_67579330
seq2: B6Ng01-321D16.b_48_1240

seq1  GAATTCTCCCTGTTGACAATTCAACATGGCTTCCAGTCTACCACTCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTGTTGACAATTCAACATGGCTTCCAGTCTACCACTCACAG  50

seq1  TCTCCTAACTCAAACGCTGACCTAAGAAGTTCCAGAACTGGAAGAATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTAACTCAAACGCTGACCTAAGAAGTTCCAGAACTGGAAGAATATT  100

seq1  TTATACCTCTTGAAAAATGTAATCCAATGGGAGACCAAAACTTTACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCTCTTGAAAAATGTAATCCAATGGGAGACCAAAACTTTACAGAA  150

seq1  TGTCTAGTCTGATGCTACAAATTCAGAAAATGAAAAGAAACATTTAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGTCTGATGCTACAAATTCAGAAAATGAAAAGAAACATTTAAAAC  200

seq1  ATTTCGCAATGGGCTGCGGTTGCTAGGGCTTTCCAAATGGACAGTTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCGCAATGGGCTGCGGTTGCTAGGGCTTTCCAAATGGACAGTTTTAC  250

seq1  ATCATTCAGGAATCTACTGCACCTTAGGAAAGGGAGGTCATTCATCGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCAGGAATCTACTGCACCTTAGGAAAGGGAGGTCATTCATCGAGG  300

seq1  TACAACCAGAGTATCTGAGCATTCCAGTCAAGACTGTGTCACTGACAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCAGAGTATCTGAGCATTCCAGTCAAGACTGTGTCACTGACAAAA  350

seq1  CCTCTGAAGGAAAACACACCCAAGGGCTGGAGACACAGCACAGCATTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAAGGAAAACACACCCAAGGGCTGGAGACACAGCACAGCATTTAA  400

seq1  GAACACCAGTTGCTCTTCCAGAAGTTGTTCAGTGGCCGGCAATCACGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACCAGTTGCTCTTCCAGAAGTTGTTCAGTGGCCGGCAATCACGTGG  450

seq1  TCACTCTTAACTATCCATAACTCCTGTTCTAGGGGATCTAACTCCATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTTAACTATCCATAACTCCTGTTCTAGGGGATCTAACTCCATCTT  500

seq1  CTGGCCTCTGTAGGCTCCTCCACACATGTAAGAGGCAAAGTACCCATGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCTGTAGGCTCCTCCACACATGTAAGAGGCAAAGTACCCATGCA  550

seq1  CCTCATTAAAGAAAAATGAAACACACACACACACACACACACACACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTAAAGAAAAATGAAACACACACACACACACACACACACACACAC  600

seq1  ACACATACACACACACACATACACACATCCTATATTCATTCGATCCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACACACACACATACACACATCCTATATTCATTCGATCCTTCT  650

seq1  CAATCCTTCTCTCTAACCCAGTTCTTGCCTGCTCTTGATCATATGCTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTTCTCTCTAACCCAGTTCTTGCCTGCTCTTGATCATATGCTGTG  700

seq1  TTGTAAAATGTAGTTAATGACTATGCCCATTTGTCGAGGAAGTGGGCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAATGTAGTTAATGACTATGCCCATTTGTCGAGGAAGTGGGCTAG  750

seq1  CTGCAGCTATGTGAGTCCTTTTGCCAGTTTTATCTGTCATTGGGTCCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCTATGTGAGTCCTTTTGCCAGTTTTATCTGTCATTGGGTCCCCT  800

seq1  TAAGATTAATGGTTCGGGTGCTGGGAAC-TTTTGGAGAGGAGAGAGTATG  849
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAAGATTAATGGTTCGGGTGCTGGGAACTTTTTGGAGAGGAGAGAGTATG  850

seq1  TTTTTATGTCTCTCATGCCATGATTTGATTAGAGGCTCCTAAGCCAAAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGTCTCTCATGCCATGATTTGATTAGAGGCTCCTAAGCCAAAGA  900

seq1  TAAGTAGGTTATGGTAGCCTCCAGCACTGTGGGCAAAGCCCTCA-CCCAG  948
      ||||||||||||||||||||||||||||||||||||||| |||| |||||
seq2  TAAGTAGGTTATGGTAGCCTCCAGCACTGTGGGCAAAGCTCTCATCCCAG  950

seq1  GAGGCATTGTATTGGGGATCAGCTGCCTGGTACAGCGGGTAACAGGAATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATTGTATTGGGGATCAGCTGCCTGGTACAGCGGGTAACAGGAATG  1000

seq1  TGTGAGCTTTGATGTTAAGTACTGAGAGAAATCACAGTT-ATATTTATAT  1047
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGTGAGCTTTGATGTTAAGTACTGAGAGAAATCACAGTTAATATTTATAT  1050

seq1  ATATATGAAACAGTGCTACCAAGAGTGG-TAATTTGAACATCTATTATTG  1096
      |||||||||||||||||||| ||||||| ||||| |||||||||||| ||
seq2  ATATATGAAACAGTGCTACC-AGAGTGGTTAATTGGAACATCTATTA-TG  1098

seq1  ATGTTTAAGAA-TCTTTCCAGATTACAATAGGGCCAGGGCAATCTCT-TG  1144
      ||| ||||||| |||||||||| ||||||| || |||||| |||||| | 
seq2  ATG-TTAAGAATTCTTTCCAGAATACAATA-GGTCAGGGCCATCTCTCTT  1146

seq1  GGAATGCTCAAAGGGAATTTTTCACAAGGTACTAAACCCAA---CTCAAT  1191
      || ||||||||  |||   |||||||||| ||||||||| |   ||||||
seq2  GGGATGCTCAA--GGA---TTTCACAAGGAACTAAACCCCAACTCTCAAT  1191

seq1  TT  1193
      ||
seq2  TT  1193


seq1: chr10_67696398_67697614
seq2: B6Ng01-321D16.g_66_1271 (reverse)

seq1  CTCTGAAAT--CAGGAGCCAAATAGATCTCTCTTCCCATACATTTTGTCC  48
      |||||||||  |||  ||||||||||| |||| || || |  ||||||||
seq2  CTCTGAAATTACAGAGGCCAAATAGAT-TCTC-TCTCAAAACTTTTGTCC  48

seq1  TAGAGACAAGACTAAAATGCTGTCACCAAAGGGAACTGGCAATCACCACT  98
      ||| |||||| ||  ||||||||||||||  ||||||||| ||||||| |
seq2  TAG-GACAAG-CT--AATGCTGTCACCAA--GGAACTGGCCATCACCAAT  92

seq1  CCCAGTTTGGAGGTTTGTCTTTCATCCTGGGGATGTATGA-GCTCGTATC  147
      ||||| ||| ||||||||| ||||||   ||||||||||| |||||||||
seq2  CCCAG-TTGAAGGTTTGTC-TTCATC--TGGGATGTATGAGGCTCGTATC  138

seq1  AAGCCAAGGGTCTCCCCAAAGTAGGTATAAGA--GACAAAGGGAGTCCAG  195
       || ||| ||||||||||||||||||||||||   ||||||||||| || 
seq2  -AGGCAAAGGTCTCCCCAAAGTAGGTATAAGAAGAACAAAGGGAGT-CAA  186

seq1  GAGACGGGAGTTCAAGGACAGCCGAATCTTTCTTTCATTTTCCCATCAGC  245
      ||||| ||||||||||||||| |||||||||| |||||||||||||||||
seq2  GAGAC-GGAGTTCAAGGACAG-CGAATCTTTC-TTCATTTTCCCATCAGC  233

seq1  TGACCATTCCACAGTCAGTCATTGTGAAATTACCATGTCTCACGAATGAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATTCCACAGTCAGTCATTGTGAAATTACCATGTCTCACGAATGAA  283

seq1  GCCAGAACAAAAATACGAGCTGGTTTCCTT-CCCCATCGTGGTTTTATGG  344
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GCCAGAACAAAAATACGAGCTGGTTTCCTTCCCCCATCGTGGTTTTATGG  333

seq1  GAGAAATAGCCACAAAGAATTTGATTCGTGAAAAGGTACCAGTGAAAAGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATAGCCACAAAGAATTTGATTCGTGAAAAGGTACCAGTGAAAAGT  383

seq1  AAAACCCAGAAATGCCGACAGGTTGGACAAAATGCAAACACAAGGACATC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCAGAAATGCCGACAGGTTGGACAAAATGCAAACACAAGGACATC  433

seq1  AGAATTCAGAAAGGTGGTTGATGTGAGCTAAACTGCCACGCTTGGCAAGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCAGAAAGGTGGTTGATGTGAGCTAAACTGCCACGCTTGGCAAGA  483

seq1  TGAAGAGGACCCACCATACTCCGATGGCTCTGTTGAAGTAGGTGAAATAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGGACCCACCATACTCCGATGGCTCTGTTGAAGTAGGTGAAATAA  533

seq1  AGCCAGAGGTGGGGCTGCCCGTCACACATGGATCCTTACTGAGGTAAAAC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAGGTGGGGCTGCCCGTCACACATGGATCCTTACTGAGGTAAAAC  583

seq1  CCAGCTTGTCCAGGTCACACTTTACACTTTGTGGTGTGCTGTCACAGGGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTGTCCAGGTCACACTTTACACTTTGTGGTGTGCTGTCACAGGGA  633

seq1  CGTCAGCTGTTGGAAATATTTCCCAAACGGCATGTTGAGGATTCATAAAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAGCTGTTGGAAATATTTCCCAAACGGCATGTTGAGGATTCATAAAT  683

seq1  AGTGATGTTTATTAAGTAACAGCCCGAACTTGGCATTACATAGAAAGGAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGTTTATTAAGTAACAGCCCGAACTTGGCATTACATAGAAAGGAG  733

seq1  AATCAACTCAAAAGTGGGCAGTAAACGAGAGGAGGAGGTGGTGGTAGAGA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACTCAAAAGTGGGCAGTAAACGAGAGGAGGAGGTGGTGGTAGAGA  783

seq1  AATAATGTTTATGTCTCAGAGGAGTGGAAAAGGCAAGACTGAGAACTAAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTTTATGTCTCAGAGGAGTGGAAAAGGCAAGACTGAGAACTAAA  833

seq1  CCTCACTAGGGTCACAGCATCTCTGGAAACAGCAGAGCATAGCCAGCTGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTAGGGTCACAGCATCTCTGGAAACAGCAGAGCATAGCCAGCTGT  883

seq1  TGGAAATCTGACCATACGTGATGACCAGACTGCAGTCTTTCTATGCCTGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATCTGACCATACGTGATGACCAGACTGCAGTCTTTCTATGCCTGG  933

seq1  AAGCCACTTTGACTCTGGCTGGAGGATTCTTAGCAAAGCAGTACCTCACA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACTTTGACTCTGGCTGGAGGATTCTTAGCAAAGCAGTACCTCACA  983

seq1  ATATAAATGAGTAAACCACCGTAATATAAACACTAGAGATGCGTCCTCAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATGAGTAAACCACCGTAATATAAACACTAGAGATGCGTCCTCAA  1033

seq1  ATGAATAACCAGGATGGTGAAGAAGCTCAAAAACCACATCCGGAGAAAGA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAACCAGGATGGTGAAGAAGCTCAAAAACCACATCCGGAGAAAGA  1083

seq1  ATTGAAAACATTTGGGGTTGTTTAGCTAAATAGAGAGAGAACTCTAAAGA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAACATTTGGGGTTGTTTAGCTAAATAGAGAGAGAACTCTAAAGA  1133

seq1  CCGTCAGAACTGAAGGGGGAAGAAATGTTAACTGGACCAACCTCTTCCAC  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCAGAACTGAAGGGGGAAGAAATGTTAACTGGACCAACCTCTTCCAC  1183

seq1  CTGGACAACCTCACAAAGAATTC  1217
      |||||||||||||||||||||||
seq2  CTGGACAACCTCACAAAGAATTC  1206


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