BAC Information

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BAC

Clone NameB6Ng01-322K12
Chromosome10 (Build37)
Map Location 104,733,236 - 104,928,904
singlet/doubletdoublet
Overlap geneTmtc2
Upstream geneLOC100042383
Downstream geneEG627573, BC067068, Ccdc59, EG667758, EG639162, Ppfia2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322K12.bB6Ng01-322K12.g
ACCGA111443GA111444
length777108
definitionB6Ng01-322K12.b B6Ng01-322K12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,928,128 - 104,928,904)(104,733,236 - 104,733,343)
sequence
gaattcctaattctaatgcttccacctcccacacattcttctttccaggt
ctgtatatgtgctatactctcttgccaattgagctgtgtcttcaatacct
tatagtttttaatttaaaaaattgaaaggcagcagagtgtgtgtatgtgt
atgtgcacagtctatagtttttcttcttataatttatatactatgttgtt
gtttcaatgggaaaattgagctcaagtgaaaatttatatgttgcatggct
gcctctgaactttctcctgcctcccttctcctcacagttattccttggtt
agttatgttggttgtcaccagggacagccagcttctatgtctttctggca
gctttagagtcttgtttcaaattatatacaggcagcagcttgacagtgat
ttgttactgttcaacccaatgttattttgattgggttgcagttcgtgata
aaatatctgttgatttgtgataaataattaatatctttaggactgttgga
gtttcctaggtggtggctttatttcctgagaactaaagaacacttgtcca
gcctgtaatttatcgtcagcaaaatgagcaaggatatttctttagctagc
atattaatgcttaagccctgaagtggccccgagagaggcccccattttct
taaagcagaggcaatttttctcccctggcagtttcagagatgaaaattct
agggaaatattttctggatcaggataagaagtacccatgccctcttttgt
tgttgttgttgttggtggtggtggtat

tcagttctaagtaataataataattattatgaaaggagcacagaacagag
cattgagcttctcctagacacagtgacaccatttagtgggggtggcgggg
ggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104928128_104928904
seq2: B6Ng01-322K12.b_44_820 (reverse)

seq1  ATACCACCACCACCAACAACAACAACAACAAAAGAGGGCATGGGTACTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCACCACCACCAACAACAACAACAACAAAAGAGGGCATGGGTACTTC  50

seq1  TTATCCTGATCCAGAAAATATTTCCCTAGAATTTTCATCTCTGAAACTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTGATCCAGAAAATATTTCCCTAGAATTTTCATCTCTGAAACTGC  100

seq1  CAGGGGAGAAAAATTGCCTCTGCTTTAAGAAAATGGGGGCCTCTCTCGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAGAAAAATTGCCTCTGCTTTAAGAAAATGGGGGCCTCTCTCGGG  150

seq1  GCCACTTCAGGGCTTAAGCATTAATATGCTAGCTAAAGAAATATCCTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTCAGGGCTTAAGCATTAATATGCTAGCTAAAGAAATATCCTTGC  200

seq1  TCATTTTGCTGACGATAAATTACAGGCTGGACAAGTGTTCTTTAGTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGCTGACGATAAATTACAGGCTGGACAAGTGTTCTTTAGTTCTC  250

seq1  AGGAAATAAAGCCACCACCTAGGAAACTCCAACAGTCCTAAAGATATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATAAAGCCACCACCTAGGAAACTCCAACAGTCCTAAAGATATTAA  300

seq1  TTATTTATCACAAATCAACAGATATTTTATCACGAACTGCAACCCAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATCACAAATCAACAGATATTTTATCACGAACTGCAACCCAATCA  350

seq1  AAATAACATTGGGTTGAACAGTAACAAATCACTGTCAAGCTGCTGCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACATTGGGTTGAACAGTAACAAATCACTGTCAAGCTGCTGCCTGT  400

seq1  ATATAATTTGAAACAAGACTCTAAAGCTGCCAGAAAGACATAGAAGCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTTGAAACAAGACTCTAAAGCTGCCAGAAAGACATAGAAGCTGG  450

seq1  CTGTCCCTGGTGACAACCAACATAACTAACCAAGGAATAACTGTGAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCTGGTGACAACCAACATAACTAACCAAGGAATAACTGTGAGGAG  500

seq1  AAGGGAGGCAGGAGAAAGTTCAGAGGCAGCCATGCAACATATAAATTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGCAGGAGAAAGTTCAGAGGCAGCCATGCAACATATAAATTTTC  550

seq1  ACTTGAGCTCAATTTTCCCATTGAAACAACAACATAGTATATAAATTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGCTCAATTTTCCCATTGAAACAACAACATAGTATATAAATTATA  600

seq1  AGAAGAAAAACTATAGACTGTGCACATACACATACACACACTCTGCTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAAACTATAGACTGTGCACATACACATACACACACTCTGCTGCC  650

seq1  TTTCAATTTTTTAAATTAAAAACTATAAGGTATTGAAGACACAGCTCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTTTTTAAATTAAAAACTATAAGGTATTGAAGACACAGCTCAAT  700

seq1  TGGCAAGAGAGTATAGCACATATACAGACCTGGAAAGAAGAATGTGTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGAGAGTATAGCACATATACAGACCTGGAAAGAAGAATGTGTGGG  750

seq1  AGGTGGAAGCATTAGAATTAGGAATTC  777
      |||||||||||||||||||||||||||
seq2  AGGTGGAAGCATTAGAATTAGGAATTC  777


seq1: chr10_104733236_104733343
seq2: B6Ng01-322K12.g_70_177

seq1  TCAGTTCTAAGTAATAATAATAATTATTATGAAAGGAGCACAGAACAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTAAGTAATAATAATAATTATTATGAAAGGAGCACAGAACAGAG  50

seq1  CATTGAGCTTCTCCTAGACACAGTGACACCATTTAGTGGGGGTGGCGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGCTTCTCCTAGACACAGTGACACCATTTAGTGGGGGTGGCGGGG  100

seq1  GGGGGGGA  108
      ||||||||
seq2  GGGGGGGA  108


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