BAC Information

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BAC

Clone NameB6Ng01-324O24
Chromosome10 (Build37)
Map Location 90,204,174 - 90,382,715
singlet/doubletdoublet
Overlap geneAnks1b
Upstream geneE030041M21Rik, E530015N03Rik, LOC100043039, LOC544719
Downstream geneApaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324O24.bB6Ng01-324O24.g
ACCGA113122GA113123
length1,0341,074
definitionB6Ng01-324O24.b B6Ng01-324O24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,204,174 - 90,205,199)(90,381,659 - 90,382,715)
sequence
gaattccatatagcaatgaaaatgatcaaactaaggttgcacataagaat
atgaataaaaatgggaagaaaagaatatgaacgaacctcaggacataatg
aatgaatgaatgaatgaatgaatgaatgaatgcttatatacaagtgattc
cattgatccttacatgtaaactaaataacttggggagataaccatgtaca
gtaaaatgcttcataaagcaatatgatagtgaaaacataatcaagagaca
gagggagggaaagggcagtatcaggaagaaaagggtatacagggcccatc
agtgatagtccgggggtttccacaggtagaggttgtttttgtttgtttgg
ttggttttttggtttttttgtgacagggtttctctgtgtagccctggctg
tcctggaactcactctgtagaccaggctagcctcgaactcagaaatccgc
ctgcctttgcctcccaagtgctggaattaaaggcgtttgccaccacgccc
ggctacaggtagaggttgtattaactctgcctttattcttgtaactcaaa
ggctaggtcgcactgcaaagcaggaatatgagattttgttggatacacgg
gagcccatccgcctcatctgagtcagaatctacaattttaacaagatccc
aggtggtttgtttgcacattaaaattttaagagtagtactctaaaattta
catatattttgtgaatattcttttgtaccaaataaatatttaataatcat
gtttgacatcacattccagttgtataagtggctaggcccttttaacaccc
tgctttcttttcttacagttatcttcaaaacctttacctatcaagaatca
gaagaaaaattactgcccatacttaatccagaacagaagagagaaagagg
acaagtaaaaacaataacaaagtatttgatgtaactcagcttgtaaataa
ctacattaatataaataaaatacagatctggggggctcagtagtctatct
gcataagaagaacacatacccagcaaacatatcc
gaattctgttagatgggacagagggaactaccaaagatagaaagcacgag
aaaagggccttgccttttggatgtttctaactggctttgagaaaaaagaa
aaaaaaaaaaaacaagtagaaaaattgtgagccctgtagaaatgcatggg
ccttgtcacagctgtgcacctggagcatgtcttctgtatgtgggtcacct
agcatcacaggtgagccttgctagcatcgtgcccagccttcagctcctcc
tgggaacatgtgtctaatgagaacaccacatgcctttgctctgttctcag
ccattgtctgcatttgttctagttggtggcttgcttgtattgactgctcc
acctagtctcagatgtcttgacacatatcacttaaaacatagcataacat
ttaagaactataacattaacattaacacttttccccttgactttatggcc
cattcctgattcattataaaattttatctttatatgaattatttgtaaaa
gtaataatggactgcaattaacttcaagattaagcttttctctgatttta
tatttttgacctttgcttctctttctttctctctctctctctctctctct
ctctctctctctctctctcaaatgtctgacttattatttctctagtttta
taaagctggttatgcattgcccttaaaaactcatgcagatgtcaacctga
atgctctgaggaattcattattatttttaagctgagcataataacctttt
tatgacttctggaagcgctgcagctatgagttcttcaaagctctccccaa
atctagcaaacattccctcagttttccccattcgacttctctccctcccg
tgttcccttgagaaagcaacaatgacattagcaaacaggtgttgtacact
taagtcacaggtgatgccgttaacagaacaacaggagtttgcacgcaact
tctgtggaatgatacaaaaggaagatttgggttgacatcgaaacgtccgc
tgaaaccagttgcttgaacatgacaacttcgaccgagcaaacagaacttc
cacacttggtccctattgttagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_90204174_90205199
seq2: B6Ng01-324O24.b_43_1069

seq1  GAATTCCATATAGCAATGAAAATGATCAAACTAAGGTTGCACATAAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATAGCAATGAAAATGATCAAACTAAGGTTGCACATAAGAAT  50

seq1  ATGAATAAAAATGGGAAGAAAAGAATATGAACGAACCTCAGGACATAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAAAAATGGGAAGAAAAGAATATGAACGAACCTCAGGACATAATG  100

seq1  AATGAATGAATGAATGAATGAATGAATGAATGCTTATATACAAGTGATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATGAATGAATGAATGAATGAATGAATGCTTATATACAAGTGATTC  150

seq1  CATTGATCCTTACATGTAAACTAAATAACTTGGGGAGATAACCATGTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATCCTTACATGTAAACTAAATAACTTGGGGAGATAACCATGTACA  200

seq1  GTAAAATGCTTCATAAAGCAATATGATAGTGAAAACATAATCAAGAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATGCTTCATAAAGCAATATGATAGTGAAAACATAATCAAGAGACA  250

seq1  GAGGGAGGGAAAGGGCAGTATCAGGAAGAAAAGGGTATACAGGGCCCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGGAAAGGGCAGTATCAGGAAGAAAAGGGTATACAGGGCCCATC  300

seq1  AGTGATAGTCCGGGGGTTTCCACAGGTAGAGGTTGTTTTTGTTTGTTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATAGTCCGGGGGTTTCCACAGGTAGAGGTTGTTTTTGTTTGTTTGG  350

seq1  TTGGTTTTTTGGTTTTTTTGTGACAGGGTTTCTCTGTGTAGCCCTGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTTGGTTTTTTTGTGACAGGGTTTCTCTGTGTAGCCCTGGCTG  400

seq1  TCCTGGAACTCACTCTGTAGACCAGGCTAGCCTCGAACTCAGAAATCCGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACTCACTCTGTAGACCAGGCTAGCCTCGAACTCAGAAATCCGC  450

seq1  CTGCCTTTGCCTCCCAAGTGCTGGAATTAAAGGCGTTTGCCACCACGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTGCCTCCCAAGTGCTGGAATTAAAGGCGTTTGCCACCACGCCC  500

seq1  GGCTACAGGTAGAGGTTGTATTAACTCTGCCTTTATTCTTGTAACTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACAGGTAGAGGTTGTATTAACTCTGCCTTTATTCTTGTAACTCAAA  550

seq1  GGCTAGGTCGCACTGCAAAGCAGGAATATGAGATTTTGTTGGATACACGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGGTCGCACTGCAAAGCAGGAATATGAGATTTTGTTGGATACACGG  600

seq1  GAGCCCATCCGCCTCATCTGAGTCAGAATCTACAATTTTAACAAGATCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCATCCGCCTCATCTGAGTCAGAATCTACAATTTTAACAAGATCCC  650

seq1  AGGTGGTTTGTTTGCACATTAAAATTTTAAGAGTAGTACTCTAAAATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTTTGTTTGCACATTAAAATTTTAAGAGTAGTACTCTAAAATTTA  700

seq1  CATATATTTTGTGAATATTCTTTTGTACCAAATAAATATTTAATAATCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATTTTGTGAATATTCTTTTGTACCAAATAAATATTTAATAATCAT  750

seq1  GTTTGACATCACATTCCAGTTGTATAAGTGGCTAGGCCCTTTAAACACCC  800
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTTTGACATCACATTCCAGTTGTATAAGTGGCTAGGCCCTTTTAACACCC  800

seq1  TGCTTTCTTTTCTTACAGTTATC-TCAAAACC-TTACCTATCAAGAATCA  848
      ||||||||||||||||||||||| |||||||| |||||||||||||||||
seq2  TGCTTTCTTTTCTTACAGTTATCTTCAAAACCTTTACCTATCAAGAATCA  850

seq1  GAAGAAAAATTACTGCCAATACTTAATCCAGAACAGAAGAGAGAAAGAGG  898
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAAGAAAAATTACTGCCCATACTTAATCCAGAACAGAAGAGAGAAAGAGG  900

seq1  ACAAGTAAAAACAAATAACAAAGTAATAGATGTAAACTCAGCTTGTAAAT  948
      |||||||||||| |||||||||||| | ||||| ||||||||||||||||
seq2  ACAAGTAAAAAC-AATAACAAAGTATTTGATGT-AACTCAGCTTGTAAAT  948

seq1  AACTACATTAATATAAATTAAAATACAGATCTTGGGGGCTCAG-AGTCTA  997
      ||||||||||||||||| |||||||||||||| |||||||||| ||||||
seq2  AACTACATTAATATAAA-TAAAATACAGATCTGGGGGGCTCAGTAGTCTA  997

seq1  GCTGCA-GAGAAGAACACATACCCAGCAAA  1026
       |||||  ||||||||||||||||||||||
seq2  TCTGCATAAGAAGAACACATACCCAGCAAA  1027

seq1: chr10_90381659_90382715
seq2: B6Ng01-324O24.g_66_1139 (reverse)

seq1  AGCT-ACAATAGGG--CCAGTGT-GAAGTTCTG-TTGCTCGGTCG-AGTT  44
      |||| |||||||||  | ||||| ||||||||| ||||||||||| ||||
seq2  AGCTAACAATAGGGACCAAGTGTGGAAGTTCTGTTTGCTCGGTCGAAGTT  50

seq1  GTCATGT--CAGC-ACTGG-TTCAGCGGACGTTTCGATGTC-ACCCAAAT  89
      |||||||   ||| ||||| ||||||||||||||||||||| ||||||||
seq2  GTCATGTTCAAGCAACTGGTTTCAGCGGACGTTTCGATGTCAACCCAAAT  100

seq1  CTTCCTTTTGTATCATTCCACAG-AGTTGCGTGCAAACTCCTGTTGTTCT  138
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTTCCTTTTGTATCATTCCACAGAAGTTGCGTGCAAACTCCTGTTGTTCT  150

seq1  GTTAACGGCATCACCTGTGACTTAAGTGTACAACACCTGTTTGCT-ATGT  187
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTTAACGGCATCACCTGTGACTTAAGTGTACAACACCTGTTTGCTAATGT  200

seq1  CATTGTTGCTTTCTCAAGGGAACACGGGAGGGAGAGAAGTCGAATGGGG-  236
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CATTGTTGCTTTCTCAAGGGAACACGGGAGGGAGAGAAGTCGAATGGGGA  250

seq1  AAACTGAGGG-ATGTTTGCTAGATTTGGGGAGAGCTTTGAAGAACTCATA  285
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAGGGAATGTTTGCTAGATTTGGGGAGAGCTTTGAAGAACTCATA  300

seq1  GCTGCAGCGCTTCCAG-AGTCAT-AAAAGGTTATTATGCTCAGCTTAAAA  333
      |||||||||||||||| |||||| ||||||||||||||||||||||||||
seq2  GCTGCAGCGCTTCCAGAAGTCATAAAAAGGTTATTATGCTCAGCTTAAAA  350

seq1  ATAATAATGAATTCCTCAGAGCATTCAGGTTGACATCTGCATGAGTTTTT  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATGAATTCCTCAGAGCATTCAGGTTGACATCTGCATGAGTTTTT  400

seq1  AAGGGCAATGCATAACCAGCTTTATAAAACTAGAGAAATAATAAGTCAGA  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAATGCATAACCAGCTTTATAAAACTAGAGAAATAATAAGTCAGA  450

seq1  CATTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAG  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAG  500

seq1  AAAGAGAAGCAAAGGTCAAAAATATAAAATCAGAGAAAAGCTTAATCTTG  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAGCAAAGGTCAAAAATATAAAATCAGAGAAAAGCTTAATCTTG  550

seq1  AAGTTAATTGCAGTCCATTATTACTTTTACAAATAATTCATATAAAGATA  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAATTGCAGTCCATTATTACTTTTACAAATAATTCATATAAAGATA  600

seq1  AAATTTTATAATGAATCAGGAATGGGCCATAAAGTCAAGGGGAAAAGTGT  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTATAATGAATCAGGAATGGGCCATAAAGTCAAGGGGAAAAGTGT  650

seq1  TAATGTTAATGTTATAGTTCTTAAATGTTATGCTATGTTTTAAGTGATAT  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTAATGTTATAGTTCTTAAATGTTATGCTATGTTTTAAGTGATAT  700

seq1  GTGTCAAGACATCTGAGACTAGGTGGAGCAGTCAATACAAGCAAGCCACC  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAAGACATCTGAGACTAGGTGGAGCAGTCAATACAAGCAAGCCACC  750

seq1  AACTAGAACAAATGCAGACAATGGCTGAGAACAGAGCAAAGGCATGTGGT  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAACAAATGCAGACAATGGCTGAGAACAGAGCAAAGGCATGTGGT  800

seq1  GTTCTCATTAGACACATGTTCCCAGGAGGAGCTGAAGGCTGGGCACGATG  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCATTAGACACATGTTCCCAGGAGGAGCTGAAGGCTGGGCACGATG  850

seq1  CTAGCAAGGCTCACCTGTGATGCTAGGTGACCCACATACAGAAGACATGC  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAGGCTCACCTGTGATGCTAGGTGACCCACATACAGAAGACATGC  900

seq1  TCCAGGTGCACAGCTGTGACAAGGCCCATGCATTTCTACAGGGCTCACAA  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTGCACAGCTGTGACAAGGCCCATGCATTTCTACAGGGCTCACAA  950

seq1  TTTTTCTACTTGTTTTTTTTTTTTTTCTTTTTTCTCAAAGCCAGTTAGAA  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTACTTGTTTTTTTTTTTTTTCTTTTTTCTCAAAGCCAGTTAGAA  1000

seq1  ACATCCAAAAGGCAAGGCCCTTTTCTCGTGCTTTCTATCTTTGGTAGTTC  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAAAAGGCAAGGCCCTTTTCTCGTGCTTTCTATCTTTGGTAGTTC  1050

seq1  CCTCTGTCCCATCTAACAGAATTC  1057
      ||||||||||||||||||||||||
seq2  CCTCTGTCCCATCTAACAGAATTC  1074