BAC Information

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BAC

Clone NameB6Ng01-326C12
Chromosome10 (Build37)
Map Location 30,437,658 - 30,575,444
singlet/doubletdoublet
Overlap geneNcoa7, LOC382354, Hey2
Upstream geneLOC623064, LOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik, LOC212815, Trmt11, Hint3
Downstream geneLOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294, Ibrdc1, LOC666055, LOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326C12.bB6Ng01-326C12.g
ACCGA114034GA114035
length1,1861,132
definitionB6Ng01-326C12.b B6Ng01-326C12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,437,658 - 30,438,864)(30,574,338 - 30,575,444)
sequence
gaattcacttgttctagaaacattctgatatttacctacttggtgctgtg
ctaggtactagatctcaaattatatgatacaaactgtcttaatatgatta
cttcctttcctaatctcttctcaaaaacagaacagaacatttacagaatc
aggaccatgttgttataatgaggcaattctagtgactcagtctctccata
atattcttttgcatgttatcactgtataaggagatagcaatgacgtattg
ctcaaggctgcaaggagtcacagataaatctatttgaaaaaataaaaaca
ttttgtcaaaatatccttctttagttctgggaaattacattgtatatgca
gaatgggcaacaattggaagtaactgctttcaacaaactctgtacttgca
taataaatattctttttacaaggcctttgcttttgctttgtcatgctatt
aagttctgcttttccctgtatgctaatatttgaaatagttctttaatgca
taaaattcaacaaataaaggaaacaatcctgcagggcatcatggcacaag
gaggcagaggaaggtgagtgtgaggccagcttgctctacatattgtatcc
cagtatagccagagctacagagtgagaccctgtcttaagattaaaacaga
caggcaggcaggcaggcagatagacagacagacagacagacaggtaggca
gactgctttatactttctgtacccagataggtcaactctcacctatacct
ttttccattatgcactgctaagttcatgttctctcttagcaccactagct
cattttgacctctgttcctgggatcgcatcttttacatatagatttcacc
tcacatctgtaaaaaagcaataaacaggcatctctaggccccttgagaaa
aatgacttagactttcaaaatctcatctctaaacacaaaatccttcctca
ttcctgagttcaaatttgtcatgtactgactgctctttttcttcctcatg
cacgatactattagcatatactgttctactgtgagcagaatctctctcag
cacttcatttcccttagctgtctctgatcagtacagctgcttcatcatcg
aatcgtctggaaaatattgcaactccccactttctttgatttacagccaa
tctaatccttagcgacagattcaaccactgtcaagt
gaattctcagtgcgctttggtttgggatgattcttaccagacttttgggt
aacttcagggggagccaaaaggaacagtgagagaaatccaggcacaatat
taaacaaaagaaaactcaaactgagggaaaacttgaaataaaaagatttt
taaaaaggaacttgaacaggaacctcagaggaaaggctcaccaacagaat
acaagagatggaagagagaatctcagacattgatgataagatagaagaaa
cggatacctcagccaaagaaaatgttacatctaaagaaaaaagaaaaaaa
aattcaatcacaaaacatccaggaaatctggcacacaatgaaaaaaaatc
tatgaataatagtgataaaggaaggagaagaaacccaagtcaaagacata
gaaaatattttttaaaaaaatcatagaagaaaacttccccaacctaagaa
ggtaacatctaatgatgtacaagaaaaatgccaaataagaaacagactag
accagaaaagaaattcccctgacatataagaatgctttcctggggaaaga
aaacccagtgcccatggattcagtctctggtggtactggatttacaagct
gggttatctgaaagagatcttcaactatgggaccatggaaaattcattat
ctacattgggtatggaagcttctagttcagttgctttagagtcatctgta
ttttgtaaatacatgccaataaacttataggttcccaggatcaacttcag
tggaatcaaactttgctttttaatggaactttataagaaggaaaagttta
cagattctcaaggggaaattctcacaacagtagcattccagcttcgtgag
tgtccatagaattaaaagacatttatttatttgtagcacaggaagtgaca
caaacatccagatatgaacactgggttgtccaattccctaagtctcacag
agatgtgaccctatgtatgtgatcacaccttatggtggcattgtttttac
accaactagggtttaatattcttcagatggaggcttctccgggggagaat
tgcacaaaaaccattttgtagaaaaggcatatcccaaggtcaagtctctc
ctctttcggaggtaatatagtccatgtcatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_30437658_30438864
seq2: B6Ng01-326C12.b_50_1235

seq1  GAATTCACTTGTTCTAGAAACATTCTGATATTTACCTACTTGGTGCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGTTCTAGAAACATTCTGATATTTACCTACTTGGTGCTGTG  50

seq1  CTAGGTACTAGATCTCAAATTATATGATACAAACTGTCTTAATATGATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTACTAGATCTCAAATTATATGATACAAACTGTCTTAATATGATTA  100

seq1  CTTCCTTTCCTAATCTCTTCTCAAAAACAGAACAGAACATTTACAGAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTTCCTAATCTCTTCTCAAAAACAGAACAGAACATTTACAGAATC  150

seq1  AGGACCATGTTGTTATAATGAGGCAATTCTAGTGACTCAGTCTCTCCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCATGTTGTTATAATGAGGCAATTCTAGTGACTCAGTCTCTCCATA  200

seq1  ATATTCTTTTGCATGTTATCACTGTATAAGGAGATAGCAATGACGTATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTTTGCATGTTATCACTGTATAAGGAGATAGCAATGACGTATTG  250

seq1  CTCAAGGCTGCAAGGAGTCACAGATAAATCTATTTGAAAAAATAAAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGCTGCAAGGAGTCACAGATAAATCTATTTGAAAAAATAAAAACA  300

seq1  TTTTGTCAAAATATCCTTCTTTAGTTCTGGGAAATTACATTGTATATGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCAAAATATCCTTCTTTAGTTCTGGGAAATTACATTGTATATGCA  350

seq1  GAATGGGCAACAATTGGAAGTAACTGCTTTCAACAAACTCTGTACTTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGCAACAATTGGAAGTAACTGCTTTCAACAAACTCTGTACTTGCA  400

seq1  TAATAAATATTCTTTTTACAAGGCCTTTGCTTTTGCTTTGTCATGCTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATATTCTTTTTACAAGGCCTTTGCTTTTGCTTTGTCATGCTATT  450

seq1  AAGTTCTGCTTTTCCCTGTATGCTAATATTTGAAATAGTTCTTTAATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGCTTTTCCCTGTATGCTAATATTTGAAATAGTTCTTTAATGCA  500

seq1  TAAAATTCAACAAATAAAGGAAACAATCCTGCAGGGCATCATGGCACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTCAACAAATAAAGGAAACAATCCTGCAGGGCATCATGGCACAAG  550

seq1  GAGGCAGAGGAAGGTGAGTGTGAGGCCAGCTTGCTCTACATATTGTATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGAAGGTGAGTGTGAGGCCAGCTTGCTCTACATATTGTATCC  600

seq1  CAGTATAGCCAGAGCTACAGAGTGAGACCCTGTCTTAAGATTAAAACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATAGCCAGAGCTACAGAGTGAGACCCTGTCTTAAGATTAAAACAGA  650

seq1  CAGGCAGGCAGGCAGGCAGATAGACAGACAGACAGACAGACAGGTAGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGGCAGGCAGGCAGATAGACAGACAGACAGACAGACAGGTAGGCA  700

seq1  GACTGCTTTATACTTTCTGTACCCAGATAGGTCAACTCTCACCTATACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCTTTATACTTTCTGTACCCAGATAGGTCAACTCTCACCTATACCT  750

seq1  TTTTCCATTATGCACTGCTAAGTTCATGTTCTCTCTTAGCACCACTAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATTATGCACTGCTAAGTTCATGTTCTCTCTTAGCACCACTAGCT  800

seq1  CATTTTGACCTCTGTTCCTGGGATCGCATCTTTTACATATAGATTTCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGACCTCTGTTCCTGGGATCGCATCTTTTACATATAGATTTCACC  850

seq1  TCACATCTGTAAAAAAGCAATAAACAGGCATCTCTAGGCCCCTTGAGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCTGTAAAAAAGCAATAAACAGGCATCTCTAGGCCCCTTGAGAAA  900

seq1  AATGACTTAGACTTTCAAAATCTCATCTCTAAACACAAAATCCTTCCTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTTAGACTTTCAAAATCTCATCTCTAAACACAAAATCCTTCCTCA  950

seq1  TTCCTGAGTTCAAATTTGTCATGTACTGACTGCTCTTTTTCTTCCTCATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAGTTCAAATTTGTCATGTACTGACTGCTCTTTTTCTTCCTCATG  1000

seq1  CACGATACTAATTAGCATATACTGTTCTACCTGTGAGCAGAATCTCTCCT  1050
      ||||||||| ||||||||||||||||||| ||||||||||||||||| ||
seq2  CACGATACT-ATTAGCATATACTGTTCTA-CTGTGAGCAGAATCTCT-CT  1047

seq1  CAGCACTTCATTTCCCTAAGGGCTTGTCTCTGATCAGTACAGCCTGCCTT  1100
      ||||||||||||||||| ||    |||||||||||||||||| ||| |||
seq2  CAGCACTTCATTTCCCTTAG---CTGTCTCTGATCAGTACAG-CTG-CTT  1092

seq1  CATCAATTCAGATTCGTCTGGGAAATAATGGCACTTCCCCCAACTTTCTT  1150
      |||||  || || |||||||| ||||| ||  |||   ||| ||||||||
seq2  CATCA--TC-GAATCGTCTGGAAAATATTGCAACT---CCCCACTTTCTT  1136

seq1  TGAGTTTTACCAGGCAAATCTAAATCCTTAGCAGACAAGATCCACCCACT  1200
      |||  |||||   || ||||| |||||||||| ||| |||| || |||||
seq2  TGA--TTTAC--AGCCAATCT-AATCCTTAGC-GAC-AGATTCAACCACT  1179

seq1  GTCAAGT  1207
      |||||||
seq2  GTCAAGT  1186

seq1: chr10_30574338_30575444
seq2: B6Ng01-326C12.g_68_1199 (reverse)

seq1  TCATGAACATTGACTATA-TACCTCCGAAAGAGGAGAAGAC-TGACC-TG  47
      ||||| |||| ||||||| ||||||||||||||||| |||| ||||| ||
seq2  TCATG-ACATGGACTATATTACCTCCGAAAGAGGAG-AGACTTGACCTTG  48

seq1  GGATATGC--TTTCTACAAAATG--TTTTGTGC-ATTCT--CCCGGAG-A  89
      ||||||||  |||||||||||||  |||||||| |||||  ||||||| |
seq2  GGATATGCCTTTTCTACAAAATGGTTTTTGTGCAATTCTCCCCCGGAGAA  98

seq1  GCCT-CATCTGA--GATAT--AAACCTAGTT-GTGTAAAA--CATGC--A  129
      |||| |||||||   ||||  || ||||||| ||||||||   ||||   
seq2  GCCTCCATCTGAAGAATATTAAACCCTAGTTGGTGTAAAAACAATGCCAC  148

seq1  CAT-AGGTGTGATCACATACATA-GGTCACATCTCTGTGAGACTTA-GGA  176
      ||| ||||||||||||||||||| |||||||||||||||||||||| |||
seq2  CATAAGGTGTGATCACATACATAGGGTCACATCTCTGTGAGACTTAGGGA  198

seq1  ATTGGACAA-CCAGTGTTCATATCTGGATGTTTGTGTCACTTCCTGTGCT  225
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGACAACCCAGTGTTCATATCTGGATGTTTGTGTCACTTCCTGTGCT  248

seq1  ACAAATAA--TAATGTCTTTTAATTCTATGGACACTCACGAAGCTGGAAT  273
      ||||||||   |||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAAATAAATGTCTTTTAATTCTATGGACACTCACGAAGCTGGAAT  298

seq1  GCTACTGTTGTGAGAATTTCCCCTTGAGAATCTGTAAACTTTTCCTTCTT  323
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGTTGTGAGAATTTCCCCTTGAGAATCTGTAAACTTTTCCTTCTT  348

seq1  ATAAAGTTCCATTAAAAAGCAAAGTTTGATTCCACTGAAGTTGATCCTGG  373
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTTCCATTAAAAAGCAAAGTTTGATTCCACTGAAGTTGATCCTGG  398

seq1  GAACCTATAAGTTTATTGGCATGTATTTACAAAATACAGATGACTCTAAA  423
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTATAAGTTTATTGGCATGTATTTACAAAATACAGATGACTCTAAA  448

seq1  GCAACTGAACTAGAAGCTTCCATACCCAATGTAGATAATGAATTTTCCAT  473
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGAACTAGAAGCTTCCATACCCAATGTAGATAATGAATTTTCCAT  498

seq1  GGTCCCATAGTTGAAGATCTCTTTCAGATAACCCAGCTTGTAAATCCAGT  523
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCATAGTTGAAGATCTCTTTCAGATAACCCAGCTTGTAAATCCAGT  548

seq1  ACCACCAGAGACTGAATCCATGGGCACTGGGTTTTCTTTCCCCAGGAAAG  573
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAGAGACTGAATCCATGGGCACTGGGTTTTCTTTCCCCAGGAAAG  598

seq1  CATTCTTATATGTCAGGGGAATTTCTTTTCTGGTCTAGTCTGTTTCTTAT  623
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTATATGTCAGGGGAATTTCTTTTCTGGTCTAGTCTGTTTCTTAT  648

seq1  TTGGCATTTTTCTTGTACATCATTAGATGTTACCTTCTTAGGTTGGGGAA  673
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATTTTTCTTGTACATCATTAGATGTTACCTTCTTAGGTTGGGGAA  698

seq1  GTTTTCTTCTATGATTTTTTTAAAAAATATTTTCTATGTCTTTGACTTGG  723
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTCTATGATTTTTTTAAAAAATATTTTCTATGTCTTTGACTTGG  748

seq1  GTTTCTTCTCCTTCCTTTATCACTATTATTCATAGATTTTTTTTCATTGT  773
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTCTCCTTCCTTTATCACTATTATTCATAGATTTTTTTTCATTGT  798

seq1  GTGCCAGATTTCCTGGATGTTTTGTGATTGAATTTTTTTTTCTTTTTTCT  823
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAGATTTCCTGGATGTTTTGTGATTGAATTTTTTTTTCTTTTTTCT  848

seq1  TTAGATGTAACATTTTCTTTGGCTGAGGTATCCGTTTCTTCTATCTTATC  873
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGTAACATTTTCTTTGGCTGAGGTATCCGTTTCTTCTATCTTATC  898

seq1  ATCAATGTCTGAGATTCTCTCTTCCATCTCTTGTATTCTGTTGGTGAGCC  923
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATGTCTGAGATTCTCTCTTCCATCTCTTGTATTCTGTTGGTGAGCC  948

seq1  TTTCCTCTGAGGTTCCTGTTCAAGTTCCTTTTTAAAAATCTTTTTATTTC  973
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTGAGGTTCCTGTTCAAGTTCCTTTTTAAAAATCTTTTTATTTC  998

seq1  AAGTTTTCCCTCAGTTTGAGTTTTCTTTTGTTTAATATTGTGCCTGGATT  1023
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTCCCTCAGTTTGAGTTTTCTTTTGTTTAATATTGTGCCTGGATT  1048

seq1  TCTCTCACTGTTCCTTTTGGCTCCCCCTGAAGTTACCCAAAAGTCTGGTA  1073
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCACTGTTCCTTTTGGCTCCCCCTGAAGTTACCCAAAAGTCTGGTA  1098

seq1  AGAATCATCCCAAACCAAAGCGCACTGAGAATTC  1107
      ||||||||||||||||||||||||||||||||||
seq2  AGAATCATCCCAAACCAAAGCGCACTGAGAATTC  1132