BAC Information

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BAC

Clone NameB6Ng01-326G04
Chromosome10 (Build37)
Map Location 109,685,491 - 109,858,363
singlet/doubletdoublet
Overlap geneLOC100042506
Upstream geneNav3, LOC100042497, LOC100042502
Downstream geneLOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904, Osbpl8, Bbs10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326G04.bB6Ng01-326G04.g
ACCGA114207GA114208
length1,094965
definitionB6Ng01-326G04.b B6Ng01-326G04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,685,491 - 109,686,353)(109,857,741 - 109,858,363)
sequence
gaattcctaacatccttgtgattttctcagagctaggaaacatactttga
gcaagatgaccagccagtgggatttgagtgtgctttataatgaggctgat
catcagaaagaccaagccataacctcctgtcatatctcttttctcccagg
aggaaggtgggactagagattgaattattaatcactcctaccaaagtccc
acaatatctgtaagtatttcaagagagctactaggttgggaactacgggc
acacgctgggagagcgagtcatcctagctccctggagaaaaaaaatgact
aagctttggacagttccccaccttaacctacagacctctccatctgtttg
ctccctgtgtcctttggaaatactgtataataaactggtgaatgcatttt
cccaaaccccataggccaatatagaaaatatgatctaatgtaagaagtgg
gctgtggaaacctacagtttgtaaacttaaaggatggagaaaaatctgag
gagccttcacttgtcattatcacctgagcaggtgttggatattatgtgtc
tgagactttaacgtaaagagtctacacaaattccaagcagatgattccag
aagtgaatggaactggaggccaaccccttggtgcctgcagagaattagat
aaaaccttgatatggataaattcctcacacaccttgtgtcagaaacaacc
tatgcctagtggagagaatggtttcttttgcccaccatatacttgtgtgt
tcctgcggcatagtttcatcttggtggggtgaaacatgatcgaggacata
gaataggagatgggtgtagagaagaatgacagctcatttacaaagccaca
ctgaaatcaaaacagcattagagatgataaacagtaaacctgaaatccaa
attggaaattacaagtcaaatctgacaggttttcaaaagcagaataggaa
aaaaagaaatgcacagttgactccaatagagccttgatgacagaaatcaa
agatattgattttcacatatggatgataggcacttccttgaacaggctta
gacagcagaaaaaaaccaccataaatacaggcatattataacca

gaattcacaggagcaaccgaaatggaaggtgttgaaggccagggacttct
ctgtcaacactcttctctttttccaaccggatctctgggactcagtcggg
gaaaaattcagccgattcagaactagaggtcaggaaaaggttggtaggtt
tatattctgctttgcctttttaagtaggcttttttttttttaatttagta
atttgaagttaatagatggagtgcaaggtatagtgatttctaatgtaccc
tctatgtgcacacaagcttaagtcttccccatcatcaatggtccccatca
gaatgatatagtgtggtgtacattcaatgagtatgaatggatataaactg
tatccatgatagtagcgtaatatagaagaatcttactgcttccaaaatcc
tctcctggccttagttgtctttctctcttgcccgctccttggtaaccaat
ggtatctctctctctccctatgaatgtcatataattgaacttatgcagca
tgaaacctcttaggattggggacaatgtgcattttagttttttcatgtga
tattttagctcacttattcccagtgctagatagtagcccattgtttggtt
gtgtcatattttatttattgacctactgaaagaaactgtaacccctccca
agctttgatagctgcacaatgtacacatgttttccctttttacggccttc
agttttcatggatagcagagtataatttctcagtcatatgatgagagtgt
atttatttttatagaaaacttccaaaccattttccagaatgggctgcatt
attctgtatccccatcagtgatgaggtagagtttctgttgttctacgtca
gtagaatgggttttggtcattccatcaggtatgtagtgggcatctagttg
atgttttgatcttgcactcccttgttgacacatgcctggttttcatatgc
ttatttacattctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_109685491_109686353
seq2: B6Ng01-326G04.b_280_1141

seq1  AGGTTGGGAACTACGGGCACACGCTGGGAGAGCGAGTCATCCTAGCTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGGAACTACGGGCACACGCTGGGAGAGCGAGTCATCCTAGCTCCC  50

seq1  TGGAGAAAAAAAATGACTAAGCTTTGGACAGTTCCCCACCTTAACCTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAAAAAAATGACTAAGCTTTGGACAGTTCCCCACCTTAACCTACA  100

seq1  GACCTCTCCATCTGTTTGCTCCCTGTGTCCTTTGGAAATACTGTATAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTCCATCTGTTTGCTCCCTGTGTCCTTTGGAAATACTGTATAATA  150

seq1  AACTGGTGAATGCATTTTCCCAAACCCCATAGGCCAATATAGAAAATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGTGAATGCATTTTCCCAAACCCCATAGGCCAATATAGAAAATATG  200

seq1  ATCTAATGTAAGAAGTGGGCTGTGGAAACCTACAGTTTGTAAACTTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATGTAAGAAGTGGGCTGTGGAAACCTACAGTTTGTAAACTTAAAG  250

seq1  GATGGAGAAAAATCTGAGGAGCCTTCACTTGTCATTATCACCTGAGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGAAAAATCTGAGGAGCCTTCACTTGTCATTATCACCTGAGCAGG  300

seq1  TGTTGGATATTATGTGTCTGAGACTTTAACGTAAAGAGTCTACACAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGATATTATGTGTCTGAGACTTTAACGTAAAGAGTCTACACAAATT  350

seq1  CCAAGCAGATGATTCCAGAAGTGAATGGAACTGGAGGCCAACCCCTTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCAGATGATTCCAGAAGTGAATGGAACTGGAGGCCAACCCCTTGGT  400

seq1  GCCTGCAGAGAATTAGATAAAACCTTGATATGGATAAATTCCTCACACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCAGAGAATTAGATAAAACCTTGATATGGATAAATTCCTCACACAC  450

seq1  CTTGTGTCAGAAACAACCTATGCCTAGTGGAGAGAATGGTTTCTTTTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTCAGAAACAACCTATGCCTAGTGGAGAGAATGGTTTCTTTTGCC  500

seq1  CACCATATACTTGTGTGTTCCTGCGGCATAGTTTCATCTTGGTGGGGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATATACTTGTGTGTTCCTGCGGCATAGTTTCATCTTGGTGGGGTGA  550

seq1  AACATGATCGAGGACATAGAATAGGAGATGGGTGTAGAGAAGAATGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATCGAGGACATAGAATAGGAGATGGGTGTAGAGAAGAATGACAG  600

seq1  CTCATTTACAAAGCCACACTGAAATCAAAACAGCATTAGAGATGATAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTACAAAGCCACACTGAAATCAAAACAGCATTAGAGATGATAAAC  650

seq1  AGTAAACCTGAAATCCAAATTGGAAATTACAAGTCAAATCTGACAGGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACCTGAAATCCAAATTGGAAATTACAAGTCAAATCTGACAGGTTT  700

seq1  TCAAAAGCAGAATAGGAAAAAAAGAAATGCACAAGTTGACTCCAATAAGA  750
      |||||||||||||||||||||||||||||||| ||||||||||||| |||
seq2  TCAAAAGCAGAATAGGAAAAAAAGAAATGCAC-AGTTGACTCCAAT-AGA  748

seq1  GCCTTGATGACAGAAATCAAAGATAATTGATTTTCAACATATGGATGATA  800
      |||||||||||||||||||||||| |||||||||| ||||||||||||||
seq2  GCCTTGATGACAGAAATCAAAGAT-ATTGATTTTC-ACATATGGATGATA  796

seq1  GGCACTTCCTTGAACAGGCTAAGACAAGCAGAAAAAA--CACCAT-AATA  847
      |||||||||||||||||||| |||| |||||||||||  |||||| ||||
seq2  GGCACTTCCTTGAACAGGCTTAGAC-AGCAGAAAAAAACCACCATAAATA  845

seq1  CA-GCATATTATAACCA  863
      || ||||||||||||||
seq2  CAGGCATATTATAACCA  862


seq1: chr10_109857741_109858363
seq2: B6Ng01-326G04.g_62_684 (reverse)

seq1  GGTCAATAAATAAAATATGACACAACCAAACAATGGGCTACTATCTAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAATAAATAAAATATGACACAACCAAACAATGGGCTACTATCTAGCA  50

seq1  CTGGGAATAAGTGAGCTAAAATATCACATGAAAAAACTAAAATGCACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAATAAGTGAGCTAAAATATCACATGAAAAAACTAAAATGCACATT  100

seq1  GTCCCCAATCCTAAGAGGTTTCATGCTGCATAAGTTCAATTATATGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAATCCTAAGAGGTTTCATGCTGCATAAGTTCAATTATATGACAT  150

seq1  TCATAGGGAGAGAGAGAGATACCATTGGTTACCAAGGAGCGGGCAAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGGAGAGAGAGAGATACCATTGGTTACCAAGGAGCGGGCAAGAGA  200

seq1  GAAAGACAACTAAGGCCAGGAGAGGATTTTGGAAGCAGTAAGATTCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACAACTAAGGCCAGGAGAGGATTTTGGAAGCAGTAAGATTCTTCT  250

seq1  ATATTACGCTACTATCATGGATACAGTTTATATCCATTCATACTCATTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACGCTACTATCATGGATACAGTTTATATCCATTCATACTCATTGA  300

seq1  ATGTACACCACACTATATCATTCTGATGGGGACCATTGATGATGGGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACACCACACTATATCATTCTGATGGGGACCATTGATGATGGGGAAG  350

seq1  ACTTAAGCTTGTGTGCACATAGAGGGTACATTAGAAATCACTATACCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGCTTGTGTGCACATAGAGGGTACATTAGAAATCACTATACCTTG  400

seq1  CACTCCATCTATTAACTTCAAATTACTAAATTAAAAAAAAAAAAGCCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCATCTATTAACTTCAAATTACTAAATTAAAAAAAAAAAAGCCTAC  450

seq1  TTAAAAAGGCAAAGCAGAATATAAACCTACCAACCTTTTCCTGACCTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGGCAAAGCAGAATATAAACCTACCAACCTTTTCCTGACCTCTA  500

seq1  GTTCTGAATCGGCTGAATTTTTCCCCGACTGAGTCCCAGAGATCCGGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAATCGGCTGAATTTTTCCCCGACTGAGTCCCAGAGATCCGGTTG  550

seq1  GAAAAAGAGAAGAGTGTTGACAGAGAAGTCCCTGGCCTTCAACACCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAGAAGAGTGTTGACAGAGAAGTCCCTGGCCTTCAACACCTTCC  600

seq1  ATTTCGGTTGCTCCTGTGAATTC  623
      |||||||||||||||||||||||
seq2  ATTTCGGTTGCTCCTGTGAATTC  623


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