BAC Information

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BAC

Clone NameB6Ng01-327H01
Chromosome10 (Build37)
Map Location 35,148,507 - 35,149,300
singlet/doubletsinglet
Overlap genenone
Upstream geneFrk, LOC667824
Downstream geneLOC100041585, LOC667860
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327H01.bB6Ng01-327H01.g
ACCGA114989GA114990
length1,2161,136
definitionB6Ng01-327H01.b B6Ng01-327H01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaactctcctcaaactattccacaaaatagaaacagaaggtact
ctacctgtgatggtttgtatattcttgaaccagggaatgtcaccatttgg
aggcatggcattgttgaaataggtatgaccttgttggagtaggtgtgtca
ctgtgtgtgtgggcttaagactcacctcagttgcttggaagtcagtcttc
cactagcagcctttggatgaagatatagaactctcagttctgcctgcacc
atgacagcctgaatgcttccataatccctccttgatgataatggactgaa
tctgatcctgtaagctagccccaattaaatgttgttttttataagacttg
ccttggtcatggtgtctgttcacagcagtaaaaccctaactaagacagaa
gttggtaccagggtctgggatattgctgggataggcctgatcatgttttt
atttgaaagaatgtgaattttgggactttggatttggaaagcagtggaat
gctttaaatggggcttaatggatcatcctagtaggaatatggaagactta
gttgctgggagtaatttgaactgtgtcgacctggcccaagagatttctaa
ggagaagaatttcagaatgtggcataaagactggttttgtttggtgaaga
atgtggctactttttgccctagtctgaaaagtctgcctgaggctaaggtg
aaaagactcatattaattgcattgacaaagaaagtttcaaaaagctcacc
ggagactttgttctctggttaagtgttatgaagagaagttttgaacaagc
atagcaagcttagaaaggaaaaatatataatatttggtttgagtattaaa
ggggtaccaggaagtgaaatagagcaacatcctgtgttctaggagataac
agattaagagagtgggatctttggggcaagatcctacacagttaaattta
gaaccaggcatggtgggtacacactttttaatccctgggagacaggcatg
ttgatctctgtgtttaaggctatctacagagcaagacccaggacagccaa
gcttaaggaggtgaaggatttggaaacggtgaagccagtgacatgtaata
gttacagttggagtcatgttctaatcctgccagcaagcagaaaagggcag
ctaagccatgtggactcttggcctcagagtaagaatgggagggaaccctc
acactggagagatatg

gaattcagtaagaatgttacctaatcagtaacattcaaatttacctctag
tagagacagtgaaattaattaggcattacaatttacttgaatggagctag
ggaagcttagggctagtctacatagtaattacttagaacaatagctgagt
cacacccatacacaggaatacacaatggcctaggaaatagttgggttgta
gtattattcatgaaagggttagtagaccagaattcccctggtgcatgttt
ttcactaggcccagaggaatagcataatcaggtatttactaaaggacccc
tggtggtgggtttaacaatagactagcattgcatcagagcattcacctgg
ctcctgagtttagtggatcttaattaaaggttgtggtggtgcacaccttt
aatcccagcacttaagaggcagaagcaggcagatctctgagttcgaggcc
agcctggtctacagagtgagttccaggacagccaggactacacagagata
ccctgtcttgaaaaaacaaacaaacaaacaaacaaatggaaaaagggttg
ttcctattctcatataaacatggcctggtttcccctagccttatgtatgc
attttctttgttttgtgttgatgtaacttggcagaggttttcgcctagct
ttcttgtttttcttctgtattaaaagtctgttgtattcttggaaaaaaat
acattcagatacagactcactctgtgcccatgtctgtttgtcacctgtgc
caactccttgctctcgcatgtaaccataaccccggatttcttccatggat
tgagagaagccgactggggccagtctacggcacatgagaataaaggaaat
tggtcttaaatgaagggaagcatgttgtctcttgtcattatataaaccag
gaaagcaatttaaaggactgcttgactgaaactaaaaagacatgggcctc
agtttaggaatacctcaactattgttctgattccattatctttgagccat
actattttaaaggtataagtctcaattgttgctatatgattgtaatagag
tttattgttctttggtcctcattgctctgaaataaagaaccaatgagtca
gaatatagtgctctcaattccagcctatctctgctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_35148507_35149300
seq2: B6Ng01-327H01.g_403_1196

seq1  TCACCTGGCTCCTGAGTTTAGTGGATCTTAATTAAAGGTTGTGGTGGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGGCTCCTGAGTTTAGTGGATCTTAATTAAAGGTTGTGGTGGTGC  50

seq1  ACACCTTTAATCCCAGCACTTAAGAGGCAGAAGCAGGCAGATCTCTGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTTAATCCCAGCACTTAAGAGGCAGAAGCAGGCAGATCTCTGAGT  100

seq1  TCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGACTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGACTACA  150

seq1  CAGAGATACCCTGTCTTGAAAAAACAAACAAACAAACAAACAAATGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATACCCTGTCTTGAAAAAACAAACAAACAAACAAACAAATGGAAA  200

seq1  AAGGGTTGTTCCTATTCTCATATAAACATGGCCTGGTTTCCCCTAGCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTGTTCCTATTCTCATATAAACATGGCCTGGTTTCCCCTAGCCTT  250

seq1  ATGTATGCATTTTCTTTGTTTTGTGTTGATGTAACTTGGCAGAGGTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGCATTTTCTTTGTTTTGTGTTGATGTAACTTGGCAGAGGTTTTC  300

seq1  GCCTAGCTTTCTTGTTTTTCTTCTGTATTAAAAGTCTGTTGTATTCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGCTTTCTTGTTTTTCTTCTGTATTAAAAGTCTGTTGTATTCTTGG  350

seq1  AAAAAAATACATTCAGATACAGACTCACTCTGTGCCCATGTCTGTTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATACATTCAGATACAGACTCACTCTGTGCCCATGTCTGTTTGTC  400

seq1  ACCTGTGCCAACTCCTTGCTCTCGCATGTAACCATAACCCCGGATTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGCCAACTCCTTGCTCTCGCATGTAACCATAACCCCGGATTTCTT  450

seq1  CCATGGATTGAGAGAAGCCGACTGGGGCCAGTCTACGGCACATGAGAAT-  499
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCATGGATTGAGAGAAGCCGACTGGGGCCAGTCTACGGCACATGAGAATA  500

seq1  AAGGAAATTGGTCTTAAATGAAGGGAAGCATGTTGTCTCTTGTCATTATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATTGGTCTTAAATGAAGGGAAGCATGTTGTCTCTTGTCATTATA  550

seq1  TAAACCAGG-AAGCAATTT-AAGGACTGCTTGACTGAAACTAAAAAGACA  597
      ||||||||| ||||||||| ||||||||||||||||||||||||||||||
seq2  TAAACCAGGAAAGCAATTTAAAGGACTGCTTGACTGAAACTAAAAAGACA  600

seq1  T-GGCCTCAGTTTAGGAATACCTCAACTATTGTTCTGATTCCAATATCTT  646
      | ||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGGGCCTCAGTTTAGGAATACCTCAACTATTGTTCTGATTCCATTATCTT  650

seq1  TGAGCCATACTATTTTAAAGGTATAAGTCTCAATTGTTGCTATATGATTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCATACTATTTTAAAGGTATAAGTCTCAATTGTTGCTATATGATTG  700

seq1  TAATAGAGTTTA-TGTTCTTTG--TCTCATTGCTCTTGAATAAAAGGACC  743
      |||||||||||| |||||||||   |||||||||| ||||  |||| |||
seq2  TAATAGAGTTTATTGTTCTTTGGTCCTCATTGCTC-TGAAATAAAGAACC  749

seq1  ATGGAGTCAG-ATATAGTGCTTTAAATTCCAG-CTATCCTCCTGCTTCTG  791
      |  ||||||| |||||||||| | |||||||| |||||        ||||
seq2  AATGAGTCAGAATATAGTGCTCTCAATTCCAGCCTATC--------TCTG  791

seq1  CTC  794
      |||
seq2  CTC  794


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