BAC Information

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BAC

Clone NameB6Ng01-328N09
Chromosome10 (Build37)
Map Location 99,167,905 - 99,169,127
singlet/doubletsinglet
Overlap genenone
Upstream geneAtp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502
Downstream geneCsl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328N09.b
ACCGA115989
length1,227
definitionB6Ng01-328N09.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttggccaaaagtaaatgatatatggaatagcaagcagatatgc
ctttaggttcctgtcttgccttccctccatggtagacttgatctggattt
gtaagctgaaatacactggctggtttgtgtggtttccccaataaatcaaa
cgattataacaccaaagtacctctcaaatctgattcttctgcccatcctt
ctatagtaccatcactggatctaaaccagtccagcttctttcttagatgg
caacagtagtccactctgttttctccttgcttctagttctcctctagtcc
agtttttgcacaatcgaagggactttctagcatccttttgccttgtctcc
ataacttccctgtccctcgacacaaggcacccatccttatttcctttctg
ctcctgtaataggcaaggtcatgtcatctcagaatgctcttcccaggttc
tttgatttatttatttatttatttttagctcttggttttaagcagtttcc
tttagaatggcctttcttcattacacctcttaggcatcttgggttactat
cccaaaattaccataagccagaaagctttaaaacaacaaggaatatttgc
tcagaatcctcaagactaagatgttcaaaatcaaggcaccagcagatttg
gggtctggtgaacactcagttcttgttttaatgacagcgcctcctcaata
tgtcctcccagggcaaatggaccctgggctttctccaaggtctcttttta
aaactactaatggcattaaaggaggcaaagtagcatgacgtcatcatctt
accaagtcctcagatataaatgttatcagaacttgagccaatctaaatgc
atttcctttttagctctcttgattttcattctctgcagaattcgcgctct
gtgagcacatggaccttaaactgttttgtgtagaactaaattgccagaac
taagactactacacaggcattagaaatccacatggaacaatagagatgac
cgtttgcttctacaaagctttccttcttcaacaaagcttactattacttt
ccaggcttttccttcagactgcttatttcttctcgaacatcatctcttct
tgcagaatgcatctcttagaagattggtggggcgtcttcactcttgtcct
gcatgcttgatttcagttccttgttggctgacctgacctgaattatgcat
gttcaaagaacgtttgaaccaggtgat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_99167905_99169127
seq2: B6Ng01-328N09.b_49_1275 (reverse)

seq1  ATCA-CTGGTTCAACTGTCTTTTGAACATGCATATATCAGGTGTCAGGTC  49
      |||| |||||||||  ||  ||||||||||||||  ||||  ||||||||
seq2  ATCACCTGGTTCAAACGTTCTTTGAACATGCATAATTCAG--GTCAGGTC  48

seq1  AGC--ACAAGGACCTG-AATCAGGCATTGCA-GAC-AGAGTG-AGACG-C  92
      |||  ||||||| ||| ||||| ||| |||| ||| |||||| ||||| |
seq2  AGCCAACAAGGAACTGAAATCAAGCA-TGCAGGACAAGAGTGAAGACGCC  97

seq1  CCAC--ATCTTCTTAGAGATTGCATCCTGCAGGAAGAGATGATGGTTCGA  140
      ||||  ||||||| ||||| ||||| ||||| ||||||||||| ||||||
seq2  CCACCAATCTTCTAAGAGA-TGCATTCTGCAAGAAGAGATGAT-GTTCGA  145

seq1  GAAGGAAATAAGCCAGTCTGAAGGAAAAGCCTGGAAAGTAATAGTAAGCT  190
      ||| |||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAA-GAAATAAG-CAGTCTGAAGGAAAAGCCTGGAAAGTAATAGTAAGCT  193

seq1  TTGTGGAAGAAGGAAAGCTTTGTAGAAGCAAACGGTCATCTCTATTGTTC  240
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAAGAAGGAAAGCTTTGTAGAAGCAAACGGTCATCTCTATTGTTC  243

seq1  CATGTGGATTTCTAATGCCTGTGTAGTAGTCTTAGTTCTGGCAATTTAGT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGATTTCTAATGCCTGTGTAGTAGTCTTAGTTCTGGCAATTTAGT  293

seq1  TCTACACAAAACAG-TTAAGGTCCATGTGCTCACAGAGCGCGAATTCTGC  339
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTACACAAAACAGTTTAAGGTCCATGTGCTCACAGAGCGCGAATTCTGC  343

seq1  AGAGAATGAAAATCAAGAGAGCTAAAAAGGAAATGCATTTAGATTGGCTC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATGAAAATCAAGAGAGCTAAAAAGGAAATGCATTTAGATTGGCTC  393

seq1  AAGTTCTGATAACATTTATATCTGAGGACTTGGTAAGATGATGACGTCAT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGATAACATTTATATCTGAGGACTTGGTAAGATGATGACGTCAT  443

seq1  GCTACTTTGCCTCCTTTAATGCCATTAGTAGTTTTAAAAAGAGACCTTGG  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTTGCCTCCTTTAATGCCATTAGTAGTTTTAAAAAGAGACCTTGG  493

seq1  AGAAAGCCCAGGGTCCATTTGCCCTGGGAGGACATATTGAGGAGGCGCTG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCCCAGGGTCCATTTGCCCTGGGAGGACATATTGAGGAGGCGCTG  543

seq1  TCATTAAAACAAGAACTGAGTGTTCACCAGACCCCAAATCTGCTGGTGCC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAAACAAGAACTGAGTGTTCACCAGACCCCAAATCTGCTGGTGCC  593

seq1  TTGATTTTGAACATCTTAGTCTTGAGGATTCTGAGCAAATATTCCTTGTT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTGAACATCTTAGTCTTGAGGATTCTGAGCAAATATTCCTTGTT  643

seq1  GTTTTAAAGCTTTCTGGCTTATGGTAATTTTGGGATAGTAACCCAAGATG  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAAGCTTTCTGGCTTATGGTAATTTTGGGATAGTAACCCAAGATG  693

seq1  CCTAAGAGGTGTAATGAAGAAAGGCCATTCTAAAGGAAACTGCTTAAAAC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGAGGTGTAATGAAGAAAGGCCATTCTAAAGGAAACTGCTTAAAAC  743

seq1  CAAGAGCTAAAAATAAATAAATAAATAAATCAAAGAACCTGGGAAGAGCA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGCTAAAAATAAATAAATAAATAAATCAAAGAACCTGGGAAGAGCA  793

seq1  TTCTGAGATGACATGACCTTGCCTATTACAGGAGCAGAAAGGAAATAAGG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGATGACATGACCTTGCCTATTACAGGAGCAGAAAGGAAATAAGG  843

seq1  ATGGGTGCCTTGTGTCGAGGGACAGGGAAGTTATGGAGACAAGGCAAAAG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGCCTTGTGTCGAGGGACAGGGAAGTTATGGAGACAAGGCAAAAG  893

seq1  GATGCTAGAAAGTCCCTTCGATTGTGCAAAAACTGGACTAGAGGAGAACT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTAGAAAGTCCCTTCGATTGTGCAAAAACTGGACTAGAGGAGAACT  943

seq1  AGAAGCAAGGAGAAAACAGAGTGGACTACTGTTGCCATCTAAGAAAGAAG  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAAGGAGAAAACAGAGTGGACTACTGTTGCCATCTAAGAAAGAAG  993

seq1  CTGGACTGGTTTAGATCCAGTGATGGTACTATAGAAGGATGGGCAGAAGA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTGGTTTAGATCCAGTGATGGTACTATAGAAGGATGGGCAGAAGA  1043

seq1  ATCAGATTTGAGAGGTACTTTGGTGTTATAATCGTTTGATTTATTGGGGA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATTTGAGAGGTACTTTGGTGTTATAATCGTTTGATTTATTGGGGA  1093

seq1  AACCACACAAACCAGCCAGTGTATTTCAGCTTACAAATCCAGATCAAGTC  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACACAAACCAGCCAGTGTATTTCAGCTTACAAATCCAGATCAAGTC  1143

seq1  TACCATGGAGGGAAGGCAAGACAGGAACCTAAAGGCATATCTGCTTGCTA  1189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGGAGGGAAGGCAAGACAGGAACCTAAAGGCATATCTGCTTGCTA  1193

seq1  TTCCATATATCATTTACTTTTGGCCAAGGAATTC  1223
      ||||||||||||||||||||||||||||||||||
seq2  TTCCATATATCATTTACTTTTGGCCAAGGAATTC  1227