BAC Information

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BAC

Clone NameB6Ng01-335I13
Chromosome10 (Build37)
Map Location 55,089,526 - 55,090,707
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041898, LOC382460
Downstream geneLOC100041927, D630037F22Rik, 1700060H10Rik, EG629732
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335I13.bB6Ng01-335I13.g
ACCGA120731GA120732
length9561,165
definitionB6Ng01-335I13.b B6Ng01-335I13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctggtcctggcattcccctatactagggcatagaaccttcacag
gaccaaggtcctctcctcgcactgatgaccaactaggacatcctctgtta
catattaagctagagacacgagtcccaccatgtattttctttggttgatg
gtttagtcccagggagctctgggggtactggttagttcatatttttgttc
ctcctagggggctgcaaaccccttcagctccttgggtactttctctagct
cctttatggggaccctgtgctccatctaatggatgactgtgagcatccac
ttctgtattagtcaggcactggctgagtctctcaggaaatagctatatta
ggttcgtgtcagcaaaatcttcttggcatctgtaatagtgtctgggtttg
gtggttgtttatgggatggattcccaggtgaagcagtctctggctggtca
tgccttcagtctctgctccaaactttgcctctgtaacttcttccatgcat
attttgttcccccttctataaaaccagagacactgaaacttatagaggag
aaagtggggaaaagccttgaagatatgggcacaggggaaaaattcctgaa
cagaacagcaaatggcttgtgctgtaagatcgagaattgacaaatgggac
ctaatgaaactccaaagtttctgcaaggcaaaagacactgtctataagac
aaaaagaccaccaacagactgggaaaggatctttacctatcctaaatcag
atagggggactaatatccaacatatataaagaactcaagaaaggtggacc
tcagaaaatcaaataacccccttaaaaaatgggggctcagaactgaacaa
agaattctcacctgaagaataccgaatggcagagaagcacctgaaaaaat
gttcacatccttaatcatcaggaaatgcaaatcaaaacacccctgagatc
cacctc

gaattcctggaagatcaagctgtctctgggtatgggtgtggggggtctga
agcacatgatctactcataggaagtctttatatttcttttctttaggaaa
acatttgtggtggcagttggcatttttcattgtaattgtgagtattaagt
cctgtgagaaacttagaaatgagtgacactgttgactgagaagcaagaaa
gatatgggagttaagcaaaacttcagaagacccaattgtggtcttgctca
gtgaatatagcttaatgagaaaattatgctacatacttagaaatcatatg
atcagcacaacataataaatgctccagcacatgtacaaacatatatgata
tatgtacatacttatataaacattttatgcaaagtacccagataaggtga
aagtagattggtagtaaaataagcaatcatccttcaagaagtataggaaa
agttagtattgatttgaatatttattataaaagaaattttaagctaaatg
ctgtttacaacaataataatatgattgttaaaagatagaatgatagctac
catatgtcacttttgtgcaggaactgagaaaaattttgtggattgggtag
gacaaaagtccctatgtctgggaggcaaattgctaacaaaagggacatca
gaatcatcttaggaggctcttagttttagtaataaaaaatttaagagtgg
actcaatgtaagctcaagacaatattattaaagtagaaatgtaacgttac
aagacagggaagatgtgaactttagatgctgccaggaagaggaggcaaga
agtgcaaatgccatgcccttaaactggcatggacttcagacatgtgactg
ggagggacacctgatagaagaatagttaagtcctaaatgtcatggcgatg
aaggctgtggtttacaaatttttaaagagaaaggcatgcttaggaaagat
ataaagaaagaaaataaagttaccacttttcaggatattctgaaattgta
tagacctagactctgcatggttatggattataagctcctgtcagaggggc
aggagtctcggatgaaactacaccattcattaaggaacaatcagttcatc
attctttttgcatgttagatgatcccaccttctatagaagttctttagcc
caagaatttgaagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_55089526_55090707
seq2: B6Ng01-335I13.g_68_1232

seq1  GAATTCCTGGAAGATCAAGCTGTCTCTGGGTATGGGTGTGGGGGGTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGAAGATCAAGCTGTCTCTGGGTATGGGTGTGGGGGGTCTGA  50

seq1  AGCACATGATCTACTCATAGGAAGTCTTTATATTTCTTTTCTTTAGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATGATCTACTCATAGGAAGTCTTTATATTTCTTTTCTTTAGGAAA  100

seq1  ACATTTGTGGTGGCAGTTGGCATTTTTCATTGTAATTGTGAGTATTAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGTGGTGGCAGTTGGCATTTTTCATTGTAATTGTGAGTATTAAGT  150

seq1  CCTGTGAGAAACTTAGAAATGAGTGACACTGTTGACTGAGAAGCAAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAGAAACTTAGAAATGAGTGACACTGTTGACTGAGAAGCAAGAAA  200

seq1  GATATGGGAGTTAAGCAAAACTTCAGAAGACCCAATTGTGGTCTTGCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGGAGTTAAGCAAAACTTCAGAAGACCCAATTGTGGTCTTGCTCA  250

seq1  GTGAATATAGCTTAATGAGAAAATTATGCTACATACTTAGAAATCATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATATAGCTTAATGAGAAAATTATGCTACATACTTAGAAATCATATG  300

seq1  ATCAGCACAACATAATAAATGCTCCAGCACATGTACAAACATATATGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCACAACATAATAAATGCTCCAGCACATGTACAAACATATATGATA  350

seq1  TATGTACATACTTATATAAACATTTTATGCAAAGTACCCAGATAAGGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACATACTTATATAAACATTTTATGCAAAGTACCCAGATAAGGTGA  400

seq1  AAGTAGATTGGTAGTAAAATAAGCAATCATCCTTCAAGAAGTATAGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGATTGGTAGTAAAATAAGCAATCATCCTTCAAGAAGTATAGGAAA  450

seq1  AGTTAGTATTGATTTGAATATTTATTATAAAAGAAATTTTAAGCTAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTATTGATTTGAATATTTATTATAAAAGAAATTTTAAGCTAAATG  500

seq1  CTGTTTACAACAATAATAATATGATTGTTAAAAGATAGAATGATAGCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTACAACAATAATAATATGATTGTTAAAAGATAGAATGATAGCTAC  550

seq1  CATATGTCACTTTTGTGCAGGAACTGAGAAAAATTTTGTGGATTGGGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTCACTTTTGTGCAGGAACTGAGAAAAATTTTGTGGATTGGGTAG  600

seq1  GACAAAAGTCCCTATGTCTGGGAGGCAAATTGCTAACAAAAGGGACATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAGTCCCTATGTCTGGGAGGCAAATTGCTAACAAAAGGGACATCA  650

seq1  GAATCATCTTAGGAGGCTCTTAGTTTTAGTAATAAAAAATTTAAGAGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATCTTAGGAGGCTCTTAGTTTTAGTAATAAAAAATTTAAGAGTGG  700

seq1  ACTCAATGTAAGCTCAAGACAATATTATTAAAGTAGAAATGTAACGTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAATGTAAGCTCAAGACAATATTATTAAAGTAGAAATGTAACGTTAC  750

seq1  AAGACAGGGAAGATGTGAACTTTAGATGCTGCCAGGAAGAGGAGGCAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGGGAAGATGTGAACTTTAGATGCTGCCAGGAAGAGGAGGCAAGA  800

seq1  AGTGCAAATGCCATGCCCTTAAACTGGCATGGACTTCAGACATGTGACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAAATGCCATGCCCTTAAACTGGCATGGACTTCAGACATGTGACTG  850

seq1  GGAGGGACACCTGATAGAAAGAATAGTTAAGTCCTAAATGTCATGGCGAT  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGAGGGACACCTGATAG-AAGAATAGTTAAGTCCTAAATGTCATGGCGAT  899

seq1  GAAGGCTGTGGTTTACAAATTTTTAAAGAGAAAGGCATGCTTAGGAAAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTGTGGTTTACAAATTTTTAAAGAGAAAGGCATGCTTAGGAAAGA  949

seq1  TATAAAAGAAAGAAAAATAAAAGTTA-CACTTTTCAGGATAATTCTGAAA  999
      ||| ||||||||||||   ||||||| ||||||||||||| |||||| ||
seq2  TAT-AAAGAAAGAAAA--TAAAGTTACCACTTTTCAGGAT-ATTCTG-AA  994

seq1  ATTGTATAGACCTAAGACTCTTGCATGGTTATGGATTATAAGCTCCTGTC  1049
      ||||||||||||| |||||| |||||||||||||||||||||||||||||
seq2  ATTGTATAGACCT-AGACTC-TGCATGGTTATGGATTATAAGCTCCTGTC  1042

seq1  AGAGGGGCAGGGAGTCTCGGAAGGAAAACTACAACATTTCATTAAAGAAC  1099
      ||||||||| ||||||||||| |  |||||||| || |||||||| ||||
seq2  AGAGGGGCA-GGAGTCTCGGATG--AAACTACACCA-TTCATTAAGGAAC  1088

seq1  AAATCAATTCATCCATCTTTTTGCATGGTTTAAGATGATCCCACCTTTCT  1149
       ||||| ||||||  ||||||||||||   | ||||||||||||| ||||
seq2  -AATCAGTTCATCATTCTTTTTGCATG---TTAGATGATCCCACC-TTCT  1133

seq1  ATAAGAAGTCCCTTAGCCAAAGAAATTGAAGCA  1182
      || |||||| | |||||| ||||| ||||||||
seq2  AT-AGAAGTTCTTTAGCCCAAGAATTTGAAGCA  1165


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