BAC Information

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BAC

Clone NameB6Ng01-338L06
Chromosome10 (Build37)
Map Location 34,251,004 - 34,251,992
singlet/doubletsinglet
Overlap geneFrk
Upstream geneA330019N05Rik, LOC100040686, EG215895, LOC100041399, Sult3a1, Rshl3, 2700019D07Rik, LOC672399, LOC666127, Rwdd1, 4732454E20Rik, BB146404, A630077B13Rik, Dse, Tspyl1, Tspyl4, Nt5dc1, Col10a1
Downstream geneLOC667824
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338L06.bB6Ng01-338L06.g
ACCGA122915GA122916
length1,175983
definitionB6Ng01-338L06.b B6Ng01-338L06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatctgaggaataccgaatggctaagaagcacctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggaggttcctca
gaaaattggacataatactgctggaggatccagcaatacctctcctgggc
atatatccagaagatgttccaactgttaagaaagacatatgctccacttt
gttcatagcagccttattcataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttgcacaatg
gagtactactctgctatttaaacaaatgaatttatgaaaacataggcaaa
tggatggacctggaagttatcatcctgagtgaggtaacccaatcacaaaa
gaactcacatgatatgtactcactgataagtggatattaacccagaaact
tagaatatccaagttacaagttgcacaatacataaaactcaagaataacg
aagaccaaagtgtggtcactttgccccttcttagaattgggaagaaaaca
ctcatggaaggagttacagagacaaaatttagagctgagatgaaagaaaa
ggatggaccatctagaaactgctgcacccagggatccatcccataatcaa
cctccaaaggcagacaccatcgcatgcgccagcaagattttgctgaaagg
accctgatatagttgtctcttgtgaggtgatgccagtgcctggcaaacac
agaagaggatgcacaagtcagctattggatggaccactgggtccccaatg
gaggagctagaagaaagtacccaaggagctaaagggatctgcaaccctat
aggtggaacacatatgaactaaccagtaacccccccccggagctcatgtc
tctagctgcatatgtatcagagatgactagtcgtcatcgaggaaagagag
cccaatgtggtgcaaactttatatgcttcagttacaagggaatgcaagat
caagaattgatttggctgctagagt
gaattctgggtttgtcaaagttcttggtagtcaatcttcctctgagtccc
tggtgtgaccaagctcctgggatcctggactcctaagatcctgggtgtgt
tagagtgcctggaagtggtacctcctctgggggatctggggttgtcagca
gatttagaaaccaaggtagaccgtagctgactggaaggaacccgaggcac
tggttgggtggggttcctgtgttcctgcttctcctggccccaggcactcc
cagtggtattggaacagatactgtgttccactcaccaatgatcctaagat
cctgggactgctagggtgcctgggaattggagagttctctttacagcggg
attgtccgctgagttcgtgcccaaggtggccagatcagaaggcacctcat
tatttctagagagaatttggtaatatgtaaacttatatgggtcagacata
gtcctccactagcagcaggagtttcagggaaacactccagttcaacacag
caaagacagcccacatttaagagaaggtttcattcagttttctaataaaa
gcaaatatatattttttttcatttagtttctggtcttagtatgtaatttt
tgaccctcctgccaattagaagcatattttaccactgcagtcatagatga
gcttttgtcctgataccgggtctgagcttctgctagatttctgagcattt
cagaagtttgtggagctttgtaaaggaagaaggactggcagctgggctga
ggtcattgacatgtgttttcaggcttcactgattccaattcctttccttc
caagagtctaacattcttgctgttctttgatttaaacccctctcttcttt
gttttaccttaaagtaaagatcctaacaggaaatagatattacctgtaag
cagtcctttgatgagagagatcttagaaacagcagatacacaacagtaag
ggtctgatggtgtgtgtgtgtgtgttgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_34251004_34251992
seq2: B6Ng01-338L06.g_68_1050

seq1  GAATTCTGGGTTTGTCAAAGTTCTTGGTAGTCAATCTTCCTCTGAGTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTTTGTCAAAGTTCTTGGTAGTCAATCTTCCTCTGAGTCCC  50

seq1  TGGTGTGACCAAGCTCCTGGGATCCTGGACTCCTAAGATCCTGGGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGACCAAGCTCCTGGGATCCTGGACTCCTAAGATCCTGGGTGTGT  100

seq1  TAGAGTGCCTGGAAGTGGTACCTCCTCTGGGGGATCTGGGGTTGTCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTGCCTGGAAGTGGTACCTCCTCTGGGGGATCTGGGGTTGTCAGCA  150

seq1  GATTTAGAAACCAAGGTAGACCGTAGCTGACTGGAAGGAACCCGAGGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGAAACCAAGGTAGACCGTAGCTGACTGGAAGGAACCCGAGGCAC  200

seq1  TGGTTGGGTGGGGTTCCTGTGTTCCTGCTTCTCCTGGCCCCAGGCACTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGGTGGGGTTCCTGTGTTCCTGCTTCTCCTGGCCCCAGGCACTCC  250

seq1  CAGTGGTATTGGAACAGATACTGTGTTCCACTCACCAATGATCCTAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTATTGGAACAGATACTGTGTTCCACTCACCAATGATCCTAAGAT  300

seq1  CCTGGGACTGCTAGGGTGCCTGGGAATTGGAGAGTTCTCTTTACAGCGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGACTGCTAGGGTGCCTGGGAATTGGAGAGTTCTCTTTACAGCGGG  350

seq1  ATTGTCCGCTGAGTTCGTGCCCAAGGTGGCCAGATCAGAAGGCACCTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCCGCTGAGTTCGTGCCCAAGGTGGCCAGATCAGAAGGCACCTCAT  400

seq1  TATTTCTAGAGAGAATTTGGTAATATGTAAACTTATATGGGTCAGACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTAGAGAGAATTTGGTAATATGTAAACTTATATGGGTCAGACATA  450

seq1  GTCCTCCACTAGCAGCAGGAGTTTCAGGGAAACACTCCAGTTCAACACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCACTAGCAGCAGGAGTTTCAGGGAAACACTCCAGTTCAACACAG  500

seq1  CAAAGACAGCCCACATTTAAGAGAAGGTTTCATTCAGTTTTCTAATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACAGCCCACATTTAAGAGAAGGTTTCATTCAGTTTTCTAATAAAA  550

seq1  GCAAATATATATTTTTTTTCATTTAGTTTCTGGTCTTAGTATGTAATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATATATATTTTTTTTCATTTAGTTTCTGGTCTTAGTATGTAATTTT  600

seq1  TGACCCTCCTGCCAATTAGAAGCATATTTTACCACTGCAGTCATAGATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTCCTGCCAATTAGAAGCATATTTTACCACTGCAGTCATAGATGA  650

seq1  GCTTTTGTCCTGATACCGGGTCTGAGCTTCTGCTAGATTTCTGAGCATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGTCCTGATACCGGGTCTGAGCTTCTGCTAGATTTCTGAGCATTT  700

seq1  CAGAAGTTTGTGGAGCTTTGTAAAGGAAGAAGGACTGGCAGCTGGGCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTTTGTGGAGCTTTGTAAAGGAAGAAGGACTGGCAGCTGGGCTGA  750

seq1  GGTCATTGACATGTGTTTTCAGGCTTCACTGATTCCAATTCCTTTCCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTGACATGTGTTTTCAGGCTTCACTGATTCCAATTCCTTTCCTTC  800

seq1  CAAGAGTCTAACATTCTTGCTGTTCTTTGATTTAAACCCCTCTCTTCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTCTAACATTCTTGCTGTTCTTTGATTTAAACCCCTCTCTTCTTT  850

seq1  GTTTTACCTTAAAAGTAAAGATCCTAACAGGAAATAGATATTACCTGTAA  900
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACCTT-AAAGTAAAGATCCTAACAGGAAATAGATATTACCTGTAA  899

seq1  GCAGTCCTTTGATGAGAAGAAGATCTTAGAAACAGCAGAATACACAACAG  950
      |||||||||||||||||   |||||||||||||||||| |||||||||||
seq2  GCAGTCCTTTGATGAGA--GAGATCTTAGAAACAGCAG-ATACACAACAG  946

seq1  TTAAGGGTCTGATGGTGTGTGTGTGTGTGTGTGTGTGTG  989
       ||||||||||||||||||||||||||||| ||||||||
seq2  -TAAGGGTCTGATGGTGTGTGTGTGTGTGT-TGTGTGTG  983