BAC Information

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BAC

Clone NameB6Ng01-341J22
Chromosome10 (Build37)
Map Location 41,345,814 - 41,489,166
singlet/doubletdoublet
Overlap geneEG629461, 2410017P07Rik
Upstream geneDdo, 9030224M15Rik, Cdc40, Wasf1, Gpr6, A530089I17Rik, LOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164, 5033413D22Rik
Downstream geneSesn1, Armc2, 1700016J18Rik, LOC624784, Foxo3a, Lace1, LOC666540, Snx3, Nr2e1, c222389, Ostm1, Sec63
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341J22.bB6Ng01-341J22.g
ACCGA124950GA124951
length967699
definitionB6Ng01-341J22.b B6Ng01-341J22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,488,626 - 41,489,166)(41,345,814 - 41,346,505)
sequence
gaattcatatgtgtggctgccctgctgtgtccaaaagacactacttcctt
gtggtcacccactgaccctggttcttacacttgccatcccttcttccaca
gtaatccttgagccttgggaggagggggtgccatatatatgttccattta
gggctggaaattcgtcagcctcttgttctcagcagcttggtcaactgtgg
gtctctattaagcaccatctattgcaaatagaagcttctctgatggggat
tgagagatgcagtatgtgtatgacaataagtcattaggaattgctttaat
actatatttagcaaaacaatagtagtagtttttcccctaaggcctatgac
ctgtgtagccctaggttcttggatcacgggtttcatcgagtggagtttag
acctaattagaaagtggttggttactctactgatgttgatgctactattg
cactattgggcgtgtcttaccaggccggtcattattgtacctcacaatac
aaggttcacagttgagtatgaaagctggctggtagcagcaattttgagtc
atagaacatgaaagagttaggctggtattgacctagaaacctcacgcctc
ttttatcaatatatctttttctttattttatgtctatggctgtttatctt
tattttacgtttatggctgtgtaccatatgcatacagtgcttagagaagt
ctaaagagggtattgaatcctctggaactggatgaaatggttgtgagcca
ccatatgggtgctgagaattgaaccctgatcctctggaagagcagccggt
gctcttaaccatttagctctctttctagcccttcattactatttttaatg
ttctttataaattctagttttttcttcaattgtagctttcaaaaatattt
aagaggtatagcttaggggaaattttctaaaatagaagtatttttggtgg
agagaactagtgtagga
gaattcagccctcattttcacaatgccaagaaaccaccatagtatcctgc
tatacaaatttctctcattacagccatgccccaggaaacccagcagcctg
actgcatgtctgagtcaaatctcgaactatactagcagtgcaagggcttt
tcctctgtggagtcacctttgccttcctcgtggtggagccaggactggga
ctctctgggggcagagatgggaccctgggagaaaggacagacatggctca
gaaggaaagaagtgaggacaggagaagctgaccccccccccccccataca
ctggctgcgggagagaagagctgctgtagtcctagccatagctgtaacag
agtggattgcatctgtctggagaggagtgtcatgggctgtccctggggtt
tcattgataggaaatagtttcccatgacaggagctgactaagatgcctgc
ctgtgagctctgtgctccatgtcactgatgcagaagtgtcgctgacttct
tcctgatctggggaagtgggtgggagaggaggctagccctcacaccccct
gctaccagaaggtccaccagagaagctgggagtctgtggtttcctttcgc
actctctgacctggctctaccatgtctcggtaaattttgttgtgtttcta
gccacttatttttctttttcccattttttgagttgtgtggggtttagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_41488626_41489166
seq2: B6Ng01-341J22.b_475_1013 (reverse)

seq1  TCCTACAACTAGTTCTCT-CACCAAAAATAC-TCTATTTTAGAAAATTTC  48
      |||||| ||||||||||| |||||||||||| ||||||||||||||||||
seq2  TCCTAC-ACTAGTTCTCTCCACCAAAAATACTTCTATTTTAGAAAATTTC  49

seq1  CCCTAAGCTATACCTCTTAAATATTTTTGAAAGCTACAATTGAAGAAAAA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGCTATACCTCTTAAATATTTTTGAAAGCTACAATTGAAGAAAAA  99

seq1  ACTAGAATTTATAAAAGAAACATTTAAAAATAGTAATGAAGGGCTAGAAA  148
      |||||||||||||||   |||| |||||||||||||||||||||||||||
seq2  ACTAGAATTTATAAA--GAACA-TTAAAAATAGTAATGAAGGGCTAGAAA  146

seq1  GAGAGCTAAATGGTTAAGAGCACCGGCTGCTCTTCCAGAGGATCAGGGTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTAAATGGTTAAGAGCACCGGCTGCTCTTCCAGAGGATCAGGGTT  196

seq1  CAATTCTCAGCACCCATATGGTGGCTCACAACCATTTCATCCAGTTCCAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTCAGCACCCATATGGTGGCTCACAACCATTTCATCCAGTTCCAG  246

seq1  AGGATTCAATACCCTCTTTAGACTTCTCTAAGCACTGTATGCATATGGTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCAATACCCTCTTTAGACTTCTCTAAGCACTGTATGCATATGGTA  296

seq1  CACAGCCATAAACGTAAAATAAAGATAAACAGCCATAGACATAAAATAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCATAAACGTAAAATAAAGATAAACAGCCATAGACATAAAATAAA  346

seq1  GAAAAAGATATATTGATAAAAGAGGCGTGAGGTTTCTAGGTCAATACCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGATATATTGATAAAAGAGGCGTGAGGTTTCTAGGTCAATACCAG  396

seq1  CCTAACTCTTTCATGTTCTATGACTCAAAATTGCTGCTACCAGCCAGCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTCTTTCATGTTCTATGACTCAAAATTGCTGCTACCAGCCAGCTT  446

seq1  TCATACTCAACTGTGAACCTTGTATTGTGAGGTACAATAATGACCGGCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTCAACTGTGAACCTTGTATTGTGAGGTACAATAATGACCGGCCT  496

seq1  GGTAAGACACGCCCAATAGTGCAATAGTAGCATCAACATCAGT  541
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGACACGCCCAATAGTGCAATAGTAGCATCAACATCAGT  539

seq1: chr10_41345814_41346505
seq2: B6Ng01-341J22.g_67_765

seq1  GAATTCAGCCCTCATTTTCACAATGCCAAGAAACCACCATAGTATCCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCCTCATTTTCACAATGCCAAGAAACCACCATAGTATCCTGC  50

seq1  TATACAAATTTCTCTCATTACAGCCATGCCCCAGGAAACCCAGCAGCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAATTTCTCTCATTACAGCCATGCCCCAGGAAACCCAGCAGCCTG  100

seq1  ACTGCATGTCTGAGTCAAATCTCGAACTATACTAGCAGTGCAAGGGCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATGTCTGAGTCAAATCTCGAACTATACTAGCAGTGCAAGGGCTTT  150

seq1  TCCTCTGTGGAGTCACCTTTGCCTTCCTCGTGGTGGAGCCAGGACTGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTGGAGTCACCTTTGCCTTCCTCGTGGTGGAGCCAGGACTGGGA  200

seq1  CTCTCTGGGGGCAGAGATGGGACCCTGGGAGAAAGGACAGACATGGCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGGGGGCAGAGATGGGACCCTGGGAGAAAGGACAGACATGGCTCA  250

seq1  GAAGGAAAGAAGTGAGGACAGGAGAAGCTGACCCCCCCCCCCCCCATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAAGAAGTGAGGACAGGAGAAGCTGACCCCCCCCCCCCCCATACA  300

seq1  CTGGCTGCGGGAGAGAAGAGCTGCTGTAGTCCTAGCCATAGCTGTAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGCGGGAGAGAAGAGCTGCTGTAGTCCTAGCCATAGCTGTAACAG  350

seq1  AGTGGATTGCATCTGTCTGGAGAGGAGTGTCATGGGCTGTCCCTGGGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATTGCATCTGTCTGGAGAGGAGTGTCATGGGCTGTCCCTGGGGTT  400

seq1  TCATTGATAGGAAATAGTTTCCCATGACAGGAGCTGACTAAGATGCCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGATAGGAAATAGTTTCCCATGACAGGAGCTGACTAAGATGCCTGC  450

seq1  CTGTGAGCTCTGTGCTCCATGTCACTGATGCAGAAGTGTCGCTGACTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGCTCTGTGCTCCATGTCACTGATGCAGAAGTGTCGCTGACTTCT  500

seq1  TCCTGATCTGGGGAAGTGGGTGGGAGAGGAGGCTAGCCCTCACACCCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATCTGGGGAAGTGGGTGGGAGAGGAGGCTAGCCCTCACACCCCCT  550

seq1  GCTACCAGAAGGTCCACCAGAGAAGCTGGGAGTCTGTGGTTTCC-TTCGC  599
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCTACCAGAAGGTCCACCAGAGAAGCTGGGAGTCTGTGGTTTCCTTTCGC  600

seq1  ACTCTCTGACCTGGCTCTACCATGTCTCGGT-AATTTTG-TGTGTTTCTA  647
      ||||||||||||||||||||||||||||||| ||||||| ||||||||||
seq2  ACTCTCTGACCTGGCTCTACCATGTCTCGGTAAATTTTGTTGTGTTTCTA  650

seq1  GCCACTTATTTT--CTTTTCCCA-TTTTTGAGTTGTGTGGGG-TTAGTA  692
      ||||||||||||   |||||||| |||||||||||||||||| ||||||
seq2  GCCACTTATTTTTCTTTTTCCCATTTTTTGAGTTGTGTGGGGTTTAGTA  699